RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 SSTP61278 116 aa7□□□□□ -1.29
UBE3B-207ENST00000537063 ZFYVE26Q68DK2 2539 aa7□□□□□ -1.29
UBE3B-207ENST00000537063 Q6ZN92 141 aa7□□□□□ -1.29
UBE3B-207ENST00000537063 NRACQ8N912 160 aa7□□□□□ -1.29
UBE3B-207ENST00000537063 ODF3Q96PU9 254 aa7□□□□□ -1.29
UBE3B-207ENST00000537063 MS4A6AQ9H2W1 248 aa7□□□□□ -1.29
UBE3B-207ENST00000537063 NXT2Q9NPJ8 142 aaKnown RBP7□□□□□ -1.29
UBE3B-207ENST00000537063 NXPH4O95158 308 aa7□□□□□ -1.29
UBE3B-207ENST00000537063 HNRNPA3P51991 378 aaKnown RBP7□□□□□ -1.29
UBE3B-207ENST00000537063 DEFB1P60022 68 aa7□□□□□ -1.29
UBE3B-207ENST00000537063 EVI2AP22794 236 aa6.99□□□□□ -1.29
UBE3B-207ENST00000537063 LGALS9BQ3B8N2 356 aa6.99□□□□□ -1.29
UBE3B-207ENST00000537063 LGALS9CQ6DKI2 356 aa6.99□□□□□ -1.29
UBE3B-207ENST00000537063 DPF1Q92782 380 aa6.99□□□□□ -1.29
UBE3B-207ENST00000537063 UBE2E2Q96LR5 201 aa6.99□□□□□ -1.29
UBE3B-207ENST00000537063 F6UB75 175 aa6.99□□□□□ -1.29
UBE3B-207ENST00000537063 ID1P41134 155 aa6.99□□□□□ -1.29
UBE3B-207ENST00000537063 H3BVH4 76 aa6.99□□□□□ -1.29
UBE3B-207ENST00000537063 HOXA3O43365 443 aaPredicted RBP6.99□□□□□ -1.29
UBE3B-207ENST00000537063 Q8N8P6 123 aa6.99□□□□□ -1.29
UBE3B-207ENST00000537063 MRAP2Q96G30 205 aa6.99□□□□□ -1.29
UBE3B-207ENST00000537063 hDV102S1A0JD36 115 aa6.98□□□□□ -1.29
UBE3B-207ENST00000537063 POM121L12Q8N7R1 296 aa6.98□□□□□ -1.29
UBE3B-207ENST00000537063 OR2K2Q8NGT1 345 aa6.98□□□□□ -1.29
UBE3B-207ENST00000537063 Q96MF0 132 aa6.98□□□□□ -1.29
UBE3B-207ENST00000537063 LRRK2Q5S007 2527 aa6.98□□□□□ -1.29
UBE3B-207ENST00000537063 ZANQ9Y493 2812 aa6.98□□□□□ -1.29
UBE3B-207ENST00000537063 RPL11P62913 178 aaKnown RBP6.98□□□□□ -1.29
UBE3B-207ENST00000537063 ANXA2RQ3ZCQ2 193 aa6.98□□□□□ -1.29
UBE3B-207ENST00000537063 K7EQG2 157 aa6.97□□□□□ -1.29
UBE3B-207ENST00000537063 GATA1P15976 413 aaPredicted RBP6.97□□□□□ -1.29
UBE3B-207ENST00000537063 FCER1GP30273 86 aa6.97□□□□□ -1.29
UBE3B-207ENST00000537063 ASIPP42127 132 aa6.97□□□□□ -1.29
UBE3B-207ENST00000537063 SMIM15Q7Z3B0 74 aa6.97□□□□□ -1.29
UBE3B-207ENST00000537063 IGHV4OR15-8A0A075B7B6 117 aa6.97□□□□□ -1.29
UBE3B-207ENST00000537063 A0A087WW49 117 aa6.97□□□□□ -1.29
UBE3B-207ENST00000537063 SPANXN1Q5VSR9 72 aa6.97□□□□□ -1.29
UBE3B-207ENST00000537063 RNASE3P12724 160 aaKnown RBP6.97□□□□□ -1.29
UBE3B-207ENST00000537063 RNASE4P34096 147 aaKnown RBP6.97□□□□□ -1.29
UBE3B-207ENST00000537063 KIR3DS1Q14943 382 aa6.97□□□□□ -1.29
UBE3B-207ENST00000537063 MCRIP2Q9BUT9 160 aaKnown RBP6.97□□□□□ -1.29
UBE3B-207ENST00000537063 TMEM86BQ8N661 226 aa6.96□□□□□ -1.29
UBE3B-207ENST00000537063 IFI27L1Q96BM0 104 aa6.96□□□□□ -1.29
UBE3B-207ENST00000537063 MAP1AP78559 2803 aaPredicted RBP6.96□□□□□ -1.3
UBE3B-207ENST00000537063 HSBP1L1C9JCN9 74 aa6.96□□□□□ -1.3
UBE3B-207ENST00000537063 COL5A1-AS1Q5SY13 56 aa6.96□□□□□ -1.3
UBE3B-207ENST00000537063 CSPG4Q6UVK1 2322 aa6.96□□□□□ -1.3
UBE3B-207ENST00000537063 A0A0J9YX75 114 aa6.96□□□□□ -1.3
UBE3B-207ENST00000537063 SRD5A1P18405 259 aa6.96□□□□□ -1.3
UBE3B-207ENST00000537063 HOXD3P31249 432 aaPredicted RBP6.96□□□□□ -1.3
UBE3B-207ENST00000537063 MXRA5Q9NR99 2828 aa6.96□□□□□ -1.3
UBE3B-207ENST00000537063 M0R381 172 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 ZMAT4Q9H898 229 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 GOLT1BQ9Y3E0 138 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 CENPEQ02224 2701 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 IGKV3-7A0A075B6H7 116 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 J3KRW8 73 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 TCAPO15273 167 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 LEPP41159 167 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 FXYD7P58549 80 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 SLC25A34Q6PIV7 304 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 ADAMTSL5Q6ZMM2 481 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 STPG4Q8N801 248 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 DPH3P1Q9H4G8 78 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 POLQO75417 2590 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 TRAV26-2A0A0B4J265 109 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 COX8AP10176 69 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 SYNJ2BPP57105 145 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 OR1N2Q8NGR9 330 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 PMCHL2Q9BQD1 86 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 FAM208BQ5VWN6 2430 aa6.95□□□□□ -1.3
UBE3B-207ENST00000537063 USP9YO00507 2555 aaPredicted RBP6.94□□□□□ -1.3
UBE3B-207ENST00000537063 APCP25054 2843 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 H0Y8G0 127 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 TIMM8BQ9Y5J9 83 aaPredicted RBP6.94□□□□□ -1.3
UBE3B-207ENST00000537063 KIF25-AS1Q9Y6Z4 181 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 C7orf71A4D174 169 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 GNRH2O43555 120 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 CD5LO43866 347 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 FGF6P10767 208 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 SNRPD3P62318 126 aaKnown RBP6.94□□□□□ -1.3
UBE3B-207ENST00000537063 RASL10AQ92737 203 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 C20orf78Q9BR46 151 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 TP73-AS1Q9UF72 201 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 SELENOKQ9Y6D0 94 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 A8MTW9 85 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 LINC00315P59091 139 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 PTPN13Q12923 2485 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 TMEM158Q8WZ71 300 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 SMIM2Q9BVW6 85 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 PHLDA3Q9Y5J5 127 aa6.94□□□□□ -1.3
UBE3B-207ENST00000537063 K7EMI3 77 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 LAGE3Q14657 143 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 PSMG4Q5JS54 123 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 TEX29Q8N6K0 151 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 C4orf3Q8WVX3 66 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 AKAP9Q99996 3911 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 TRAV2A0A0B4J234 112 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 S100A4P26447 101 aaKnown RBP6.93□□□□□ -1.3
UBE3B-207ENST00000537063 ODF1Q14990 250 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms