RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 GAS8-AS1O95177 125 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 ORM1P02763 201 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 LEPP41159 167 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 TCTAP57738 103 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 C15orf32Q32M92 178 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 IGFL4Q6B9Z1 124 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 IL17RELQ6ZVW7 336 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 ERASQ7Z444 233 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 NRACQ8N912 160 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 OR2K2Q8NGT1 345 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 EEF1AKMT3Q96AZ1 226 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 MRPL16Q9NX20 251 aaKnown RBP4.37□□□□□ -1.71
VPS33A-203ENST00000536212 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 DKK2Q9UBU2 259 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 MALRD1Q5VYJ5 2156 aa4.37□□□□□ -1.71
VPS33A-203ENST00000536212 PLXNB1O43157 2135 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 BRI3O95415 125 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 UCNP55089 124 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 FXYD7P58549 80 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 LMO4P61968 165 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 SRSF1Q07955 248 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS33A-203ENST00000536212 KLRB1Q12918 225 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 PCP2Q8IVA1 136 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 C5orf56Q8N8D9 126 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 IL17DQ8TAD2 202 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 ITLN2Q8WWU7 325 aaPredicted RBP4.36□□□□□ -1.71
VPS33A-203ENST00000536212 TMEM158Q8WZ71 300 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 DUX5Q96PT3 197 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 METTL26Q96S19 204 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 NAV3Q8IVL0 2385 aa4.36□□□□□ -1.71
VPS33A-203ENST00000536212 TNRC18O15417 2968 aaPredicted RBP4.36□□□□□ -1.71
VPS33A-203ENST00000536212 URB1O60287 2271 aaKnown RBP4.35□□□□□ -1.71
VPS33A-203ENST00000536212 ZNF318Q5VUA4 2279 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 PLCE1Q9P212 2302 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 IGKV2D-26A0A0A0MRZ7 120 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 A0A0G2JLM5 398 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 A0A1W2PPR1 153 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 FAM223BA6NKX1 122 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 LINC01619G3V211 115 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 DPM2O94777 84 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 IGKCP01834 107 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 GATA1P15976 413 aaPredicted RBP4.35□□□□□ -1.71
VPS33A-203ENST00000536212 SAA4P35542 130 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 UQCRFS1P47985 274 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 EFNA4P52798 201 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 RPL32P62910 135 aaKnown RBP4.35□□□□□ -1.71
VPS33A-203ENST00000536212 ATP5G2Q06055 141 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 TAL2Q16559 108 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 ECSCRQ19T08 205 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 CLEC19AQ6UXS0 136 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 C9orf139Q6ZV77 190 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 NEGR1Q7Z3B1 354 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 ZGRF1Q86YA3 2104 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 FAM223AQ8IWN6 122 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 RNF182Q8N6D2 247 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 OR5A1Q8NGJ0 315 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 PHLDA1Q8WV24 401 aaPredicted RBP4.35□□□□□ -1.71
VPS33A-203ENST00000536212 AP1S3Q96PC3 154 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 TM2D2Q9BX73 214 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 KRTAP3-1Q9BYR8 98 aa4.35□□□□□ -1.71
VPS33A-203ENST00000536212 WDFY3Q8IZQ1 3526 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 ICE1Q9Y2F5 2266 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 NCOR1O75376 2440 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 IGHV3OR16-8A0A075B7F1 116 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 A0A087WX48 190 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 TRAV12-1A0A0B4J245 112 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 IGHV3-35A0A0C4DH35 117 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 A0A1W2PPM0 123 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 LINC01548A6NM66 108 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 G3V318 75 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 H3BUT2 72 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 K7EMI3 77 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 SOCS3O14543 225 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 NPFFO15130 113 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 SLPIP03973 132 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 TRGV3P03979 118 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 PRSS1P07477 247 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 AZU1P20160 251 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 NMUP48645 174 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 LAGE3Q14657 143 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 TMEM78Q5T7P6 136 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 APRG1Q8IVJ8 170 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 ZFAND2AQ8N6M9 145 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 POM121L12Q8N7R1 296 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 FAM19A4Q96LR4 140 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 LINC00477Q96M19 166 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 C18orf15Q96N68 181 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 FOXC2Q99958 501 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 CHAC1Q9BUX1 264 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 UFC1Q9Y3C8 167 aa4.34□□□□□ -1.71
VPS33A-203ENST00000536212 SVILO95425 2214 aa4.34□□□□□ -1.72
VPS33A-203ENST00000536212 TRBV25-1A0A075B6N4 114 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 TRAV41A0A0B4J266 112 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 IGHV3-66A0A0C4DH42 116 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 TMEM8BA6NDV4 472 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 H3BUA1 57 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 M0R381 172 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 PRYO14603 147 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 OVOL1O14753 267 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 ZNF207O43670 478 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms