RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 A0A1W2PPR1 153 aa13.85□□□□□ -0.19
RAB40C-203ENST00000535977 FCER1GP30273 86 aa13.85□□□□□ -0.19
RAB40C-203ENST00000535977 PSMG4Q5JS54 123 aa13.85□□□□□ -0.19
RAB40C-203ENST00000535977 ZC2HC1BQ5TFG8 222 aa13.85□□□□□ -0.19
RAB40C-203ENST00000535977 CFAP126Q5VTH2 177 aa13.85□□□□□ -0.19
RAB40C-203ENST00000535977 FAM208BQ5VWN6 2430 aa13.85□□□□□ -0.19
RAB40C-203ENST00000535977 PRSS29PA6NIE9 313 aa13.84□□□□□ -0.19
RAB40C-203ENST00000535977 EVI2AP22794 236 aa13.84□□□□□ -0.19
RAB40C-203ENST00000535977 SRSF2Q01130 221 aaKnown RBP13.84□□□□□ -0.19
RAB40C-203ENST00000535977 C8orf49Q96NF6 230 aa13.84□□□□□ -0.19
RAB40C-203ENST00000535977 KMT2BQ9UMN6 2715 aaPredicted RBP13.84□□□□□ -0.19
RAB40C-203ENST00000535977 PRSS1P07477 247 aa13.84□□□□□ -0.19
RAB40C-203ENST00000535977 LMO4P61968 165 aa13.84□□□□□ -0.19
RAB40C-203ENST00000535977 LYZL1Q6UWQ5 148 aa13.84□□□□□ -0.19
RAB40C-203ENST00000535977 PRR25Q96S07 402 aa13.84□□□□□ -0.19
RAB40C-203ENST00000535977 IGHV3-23P01764 117 aa13.84□□□□□ -0.19
RAB40C-203ENST00000535977 AJUBAQ96IF1 538 aa13.84□□□□□ -0.19
RAB40C-203ENST00000535977 HIST1H4GQ99525 98 aa13.84□□□□□ -0.19
RAB40C-203ENST00000535977 TAL2Q16559 108 aa13.83□□□□□ -0.2
RAB40C-203ENST00000535977 SH2D1AO60880 128 aa13.83□□□□□ -0.2
RAB40C-203ENST00000535977 SAA4P35542 130 aa13.83□□□□□ -0.2
RAB40C-203ENST00000535977 C15orf32Q32M92 178 aa13.83□□□□□ -0.2
RAB40C-203ENST00000535977 FAM110AQ9BQ89 295 aa13.83□□□□□ -0.2
RAB40C-203ENST00000535977 TMSB15BA0A087X1C1 80 aa13.82□□□□□ -0.2
RAB40C-203ENST00000535977 CKS2P33552 79 aa13.82□□□□□ -0.2
RAB40C-203ENST00000535977 PTH2Q96A98 100 aa13.82□□□□□ -0.2
RAB40C-203ENST00000535977 SMAD5-AS1Q9Y6J3 95 aa13.82□□□□□ -0.2
RAB40C-203ENST00000535977 FOXC2Q99958 501 aa13.82□□□□□ -0.2
RAB40C-203ENST00000535977 LEPP41159 167 aa13.81□□□□□ -0.2
RAB40C-203ENST00000535977 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-203ENST00000535977 ITLN2Q8WWU7 325 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-203ENST00000535977 TRBV7-1A0A0A6YYK4 115 aa13.81□□□□□ -0.2
RAB40C-203ENST00000535977 CENPVL3A0A0U1RRI6 287 aa13.81□□□□□ -0.2
RAB40C-203ENST00000535977 RBAKDNA6NC62 111 aa13.81□□□□□ -0.2
RAB40C-203ENST00000535977 NPFFO15130 113 aa13.81□□□□□ -0.2
RAB40C-203ENST00000535977 CARD19Q96LW7 228 aa13.81□□□□□ -0.2
RAB40C-203ENST00000535977 IGKV2-40A0A087WW87 121 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-203ENST00000535977 ATP6V0E1O15342 81 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 DPM2O94777 84 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 IGKV2D-40P01614 121 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-203ENST00000535977 EEF1AKMT3Q96AZ1 226 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 SLC50A1Q9BRV3 221 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 BPESC1Q9GZL8 116 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 CLEC3BP05452 202 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 NHLRC4P0CG21 123 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-203ENST00000535977 HLA-DRB4P13762 266 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 ECSCRQ19T08 205 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 ZFAND6Q6FIF0 208 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 TMEM160Q9NX00 188 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 HLA-DRB4X5D2U9 266 aa13.8□□□□□ -0.2
RAB40C-203ENST00000535977 LINC01548A6NM66 108 aa13.79□□□□□ -0.2
RAB40C-203ENST00000535977 ZFAND3Q9H8U3 227 aa13.79□□□□□ -0.2
RAB40C-203ENST00000535977 ZNF462Q96JM2 2506 aa13.79□□□□□ -0.2
RAB40C-203ENST00000535977 TRBV7-3A0A075B6L6 115 aa13.79□□□□□ -0.2
RAB40C-203ENST00000535977 BUB3O43684 328 aa13.79□□□□□ -0.2
RAB40C-203ENST00000535977 TRAV40A0A0B4J280 105 aa13.78□□□□□ -0.2
RAB40C-203ENST00000535977 PRB1P04280 392 aa13.78□□□□□ -0.2
RAB40C-203ENST00000535977 SMIM20Q8N5G0 67 aa13.78□□□□□ -0.2
RAB40C-203ENST00000535977 TMEM158Q8WZ71 300 aa13.78□□□□□ -0.2
RAB40C-203ENST00000535977 DLX4Q92988 240 aaPredicted RBP13.78□□□□□ -0.2
RAB40C-203ENST00000535977 BBC3Q96PG8 261 aaPredicted RBP13.78□□□□□ -0.2
RAB40C-203ENST00000535977 ANXA2RQ3ZCQ2 193 aa13.78□□□□□ -0.2
RAB40C-203ENST00000535977 TEX29Q8N6K0 151 aa13.78□□□□□ -0.2
RAB40C-203ENST00000535977 IGHG4P01861 327 aa13.77□□□□□ -0.2
RAB40C-203ENST00000535977 FABP5P3A8MUU1 101 aa13.77□□□□□ -0.21
RAB40C-203ENST00000535977 TWIST1Q15672 202 aa13.77□□□□□ -0.21
RAB40C-203ENST00000535977 PPDPFLQ8WWR9 84 aa13.77□□□□□ -0.21
RAB40C-203ENST00000535977 HOXA3O43365 443 aaPredicted RBP13.77□□□□□ -0.21
RAB40C-203ENST00000535977 PSMB2P49721 201 aa13.77□□□□□ -0.21
RAB40C-203ENST00000535977 RPL32P62910 135 aaKnown RBP13.77□□□□□ -0.21
RAB40C-203ENST00000535977 MRPL53Q96EL3 112 aaKnown RBP13.77□□□□□ -0.21
RAB40C-203ENST00000535977 GAS8-AS1O95177 125 aa13.76□□□□□ -0.21
RAB40C-203ENST00000535977 SFTA2Q6UW10 78 aa13.76□□□□□ -0.21
RAB40C-203ENST00000535977 C5orf56Q8N8D9 126 aa13.76□□□□□ -0.21
RAB40C-203ENST00000535977 HIF1ANQ9NWT6 349 aa13.76□□□□□ -0.21
RAB40C-203ENST00000535977 MRPL35Q9NZE8 188 aaKnown RBP13.76□□□□□ -0.21
RAB40C-203ENST00000535977 BRI3O95415 125 aa13.75□□□□□ -0.21
RAB40C-203ENST00000535977 IGLC6P0CF74 106 aa13.75□□□□□ -0.21
RAB40C-203ENST00000535977 METTL26Q96S19 204 aa13.75□□□□□ -0.21
RAB40C-203ENST00000535977 MAP1LC3AQ9H492 121 aa13.75□□□□□ -0.21
RAB40C-203ENST00000535977 CRIP2P52943 208 aaPredicted RBP13.75□□□□□ -0.21
RAB40C-203ENST00000535977 CCDC140Q96MF4 163 aa13.75□□□□□ -0.21
RAB40C-203ENST00000535977 MOB4Q9Y3A3 225 aa13.75□□□□□ -0.21
RAB40C-203ENST00000535977 CLEC19AQ6UXS0 136 aa13.74□□□□□ -0.21
RAB40C-203ENST00000535977 FAM223BA6NKX1 122 aa13.74□□□□□ -0.21
RAB40C-203ENST00000535977 ATP5LO75964 103 aa13.74□□□□□ -0.21
RAB40C-203ENST00000535977 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.74□□□□□ -0.21
RAB40C-203ENST00000535977 ZFP2Q6ZN57 461 aa13.74□□□□□ -0.21
RAB40C-203ENST00000535977 TEN1Q86WV5 123 aa13.74□□□□□ -0.21
RAB40C-203ENST00000535977 FAM223AQ8IWN6 122 aa13.74□□□□□ -0.21
RAB40C-203ENST00000535977 CNFNQ9BYD5 112 aa13.74□□□□□ -0.21
RAB40C-203ENST00000535977 MYO18BQ8IUG5 2567 aa13.73□□□□□ -0.21
RAB40C-203ENST00000535977 WNK2Q9Y3S1 2297 aa13.73□□□□□ -0.21
RAB40C-203ENST00000535977 KIR2DL4Q99706 377 aa13.73□□□□□ -0.21
RAB40C-203ENST00000535977 CITED1Q99966 193 aa13.73□□□□□ -0.21
RAB40C-203ENST00000535977 CLPSL1A2RUU4 121 aa13.73□□□□□ -0.21
RAB40C-203ENST00000535977 CCDC179H3BU77 68 aa13.73□□□□□ -0.21
RAB40C-203ENST00000535977 IGHV3-35A0A0C4DH35 117 aa13.72□□□□□ -0.21
RAB40C-203ENST00000535977 LOC107984156A0A0G2JMH3 177 aa13.72□□□□□ -0.21
RAB40C-203ENST00000535977 LINC01546A6NGU7 62 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms