RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TRAV21A0A0B4J279 112 aa8.7□□□□□ -1.02
TNFRSF1A-207ENST00000535958 IBA57-AS1B1ANH7 110 aa8.7□□□□□ -1.02
TNFRSF1A-207ENST00000535958 DIRC3C9JPN6 131 aa8.7□□□□□ -1.02
TNFRSF1A-207ENST00000535958 IGHV3-30P01768 117 aa8.7□□□□□ -1.02
TNFRSF1A-207ENST00000535958 IGHV3-33P01772 117 aa8.7□□□□□ -1.02
TNFRSF1A-207ENST00000535958 IGHV3-30-3P0DP02 117 aa8.7□□□□□ -1.02
TNFRSF1A-207ENST00000535958 IGHV3-30-5P0DP03 117 aa8.7□□□□□ -1.02
TNFRSF1A-207ENST00000535958 TMED6Q8WW62 240 aa8.7□□□□□ -1.02
TNFRSF1A-207ENST00000535958 KCNS1Q96KK3 526 aa8.7□□□□□ -1.02
TNFRSF1A-207ENST00000535958 WDR61Q9GZS3 305 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-207ENST00000535958 SRRM2Q9UQ35 2752 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-207ENST00000535958 FAM240BA0A1B0GVZ2 78 aa8.69□□□□□ -1.02
TNFRSF1A-207ENST00000535958 LRCOL1A6NCL2 159 aa8.69□□□□□ -1.02
TNFRSF1A-207ENST00000535958 PLA2G10O15496 165 aa8.69□□□□□ -1.02
TNFRSF1A-207ENST00000535958 GATA1P15976 413 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-207ENST00000535958 RHOHQ15669 191 aa8.69□□□□□ -1.02
TNFRSF1A-207ENST00000535958 TDRG1Q3Y452 100 aa8.69□□□□□ -1.02
TNFRSF1A-207ENST00000535958 LRRC37A5PQ49AS3 106 aa8.69□□□□□ -1.02
TNFRSF1A-207ENST00000535958 NDFIP1Q9BT67 221 aa8.69□□□□□ -1.02
TNFRSF1A-207ENST00000535958 NMES1Q9C002 83 aa8.69□□□□□ -1.02
TNFRSF1A-207ENST00000535958 F6UZH7 168 aa8.68□□□□□ -1.02
TNFRSF1A-207ENST00000535958 GNRH2O43555 120 aa8.68□□□□□ -1.02
TNFRSF1A-207ENST00000535958 C1QBP02746 253 aa8.68□□□□□ -1.02
TNFRSF1A-207ENST00000535958 IL15RAQ13261 267 aa8.68□□□□□ -1.02
TNFRSF1A-207ENST00000535958 FFAR4Q5NUL3 377 aa8.68□□□□□ -1.02
TNFRSF1A-207ENST00000535958 ASB13Q8WXK3 278 aa8.68□□□□□ -1.02
TNFRSF1A-207ENST00000535958 SH3BGRL3Q9H299 93 aa8.68□□□□□ -1.02
TNFRSF1A-207ENST00000535958 OTORQ9NRC9 128 aa8.68□□□□□ -1.02
TNFRSF1A-207ENST00000535958 CIDEAO60543 219 aa8.67□□□□□ -1.02
TNFRSF1A-207ENST00000535958 TYMSP04818 313 aa8.67□□□□□ -1.02
TNFRSF1A-207ENST00000535958 LAGE3Q14657 143 aa8.67□□□□□ -1.02
TNFRSF1A-207ENST00000535958 ZNF876PQ49A33 203 aa8.67□□□□□ -1.02
TNFRSF1A-207ENST00000535958 LELP1Q5T871 98 aa8.67□□□□□ -1.02
TNFRSF1A-207ENST00000535958 MZT2BQ6NZ67 158 aa8.67□□□□□ -1.02
TNFRSF1A-207ENST00000535958 GOLT1AQ6ZVE7 132 aa8.67□□□□□ -1.02
TNFRSF1A-207ENST00000535958 SCGB1C1Q8TD33 95 aa8.67□□□□□ -1.02
TNFRSF1A-207ENST00000535958 TREM1Q9NP99 234 aa8.67□□□□□ -1.02
TNFRSF1A-207ENST00000535958 PGPA6NDG6 321 aa8.66□□□□□ -1.02
TNFRSF1A-207ENST00000535958 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
TNFRSF1A-207ENST00000535958 SLC25A29Q8N8R3 303 aa8.66□□□□□ -1.02
TNFRSF1A-207ENST00000535958 OR5AC2Q9NZP5 309 aa8.66□□□□□ -1.02
TNFRSF1A-207ENST00000535958 IGHV3-73A0A0B4J1V6 119 aa8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 TRBV6-4A0A1B0GX49 114 aa8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 CYCSP99999 105 aaKnown RBP8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 TOR2AQ5JU69 321 aa8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 SYT8Q8NBV8 401 aa8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 ATP6V0E2Q8NHE4 81 aa8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 DEFB104AQ8WTQ1 72 aa8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 CCDC32Q9BV29 185 aa8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 GTSF1LQ9H1H1 148 aa8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 MBD2Q9UBB5 411 aa8.65□□□□□ -1.02
TNFRSF1A-207ENST00000535958 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.64□□□□□ -1.03
TNFRSF1A-207ENST00000535958 TRAV8-3A0A0A6YYJ7 113 aa8.64□□□□□ -1.03
TNFRSF1A-207ENST00000535958 A0A1W2PPV4 95 aa8.64□□□□□ -1.03
TNFRSF1A-207ENST00000535958 SIX6O95475 246 aa8.64□□□□□ -1.03
TNFRSF1A-207ENST00000535958 PET100P0DJ07 73 aa8.64□□□□□ -1.03
TNFRSF1A-207ENST00000535958 ZFP69Q49AA0 526 aa8.64□□□□□ -1.03
TNFRSF1A-207ENST00000535958 ENKURQ8TC29 256 aa8.64□□□□□ -1.03
TNFRSF1A-207ENST00000535958 TRAV8-1A0A0A6YYK1 113 aa8.63□□□□□ -1.03
TNFRSF1A-207ENST00000535958 K7EQM0 130 aa8.63□□□□□ -1.03
TNFRSF1A-207ENST00000535958 LECT2O14960 151 aa8.63□□□□□ -1.03
TNFRSF1A-207ENST00000535958 RS1O15537 224 aa8.63□□□□□ -1.03
TNFRSF1A-207ENST00000535958 MGST1P10620 155 aaKnown RBP8.63□□□□□ -1.03
TNFRSF1A-207ENST00000535958 ACOT6Q3I5F7 207 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF1A-207ENST00000535958 CFAP126Q5VTH2 177 aa8.63□□□□□ -1.03
TNFRSF1A-207ENST00000535958 PQLC2Q6ZP29 291 aa8.63□□□□□ -1.03
TNFRSF1A-207ENST00000535958 RMI2Q96E14 147 aa8.63□□□□□ -1.03
TNFRSF1A-207ENST00000535958 COX11Q9Y6N1 276 aa8.63□□□□□ -1.03
TNFRSF1A-207ENST00000535958 SERTM2A0A1B0GWG4 89 aa8.62□□□□□ -1.03
TNFRSF1A-207ENST00000535958 KRTAP29-1A8MX34 341 aaPredicted RBP8.62□□□□□ -1.03
TNFRSF1A-207ENST00000535958 GGTLC3B5MD39 225 aa8.62□□□□□ -1.03
TNFRSF1A-207ENST00000535958 ARL6IP6Q8N6S5 226 aa8.62□□□□□ -1.03
TNFRSF1A-207ENST00000535958 SMIM3Q9BZL3 60 aa8.62□□□□□ -1.03
TNFRSF1A-207ENST00000535958 URGCP-MRPS24S4R325 110 aa8.62□□□□□ -1.03
TNFRSF1A-207ENST00000535958 DNAH8Q96JB1 4490 aa8.61□□□□□ -1.03
TNFRSF1A-207ENST00000535958 TAAR5O14804 337 aa8.61□□□□□ -1.03
TNFRSF1A-207ENST00000535958 EIF3GO75821 320 aaKnown RBP eCLIP8.61□□□□□ -1.03
TNFRSF1A-207ENST00000535958 SEC11BP0C7V7 166 aa8.61□□□□□ -1.03
TNFRSF1A-207ENST00000535958 GNG5P63218 68 aa8.61□□□□□ -1.03
TNFRSF1A-207ENST00000535958 HSPB11Q9Y547 144 aa8.61□□□□□ -1.03
TNFRSF1A-207ENST00000535958 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 RBFOX3A6NFN3 312 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 H0YIZ8 118 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 GCGP01275 180 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 S100A4P26447 101 aaKnown RBP8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 GAGE1Q13065 139 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 GAGE4Q13068 117 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 GAGE5Q13069 117 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 GAGE13Q4V321 117 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 ZNF506Q5JVG8 444 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 SERTAD4-AS1Q5TG53 156 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 PPP1R1CQ8WVI7 109 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 SGK494Q96LW2 274 aa8.6□□□□□ -1.03
TNFRSF1A-207ENST00000535958 A0A087WWC5 75 aa8.59□□□□□ -1.03
TNFRSF1A-207ENST00000535958 ASAH1Q13510 395 aa8.59□□□□□ -1.03
TNFRSF1A-207ENST00000535958 WFDC2Q14508 124 aa8.59□□□□□ -1.03
TNFRSF1A-207ENST00000535958 KCNIP4Q6PIL6 250 aa8.59□□□□□ -1.03
TNFRSF1A-207ENST00000535958 DPPA3Q6W0C5 159 aa8.59□□□□□ -1.03
TNFRSF1A-207ENST00000535958 Q6ZSA8 131 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms