RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 GCN1Q92616 2671 aaKnown RBP6.09□□□□□ -1.43
COL21A1-212ENST00000535941 TCTEX1D4Q5JR98 221 aa6.09□□□□□ -1.43
COL21A1-212ENST00000535941 FAM162BQ5T6X4 162 aa6.09□□□□□ -1.43
COL21A1-212ENST00000535941 LINC00322Q6ZN03 302 aaPredicted RBP6.09□□□□□ -1.43
COL21A1-212ENST00000535941 Q71RC1 249 aaPredicted RBP6.09□□□□□ -1.43
COL21A1-212ENST00000535941 LINC00479Q96M42 142 aa6.09□□□□□ -1.43
COL21A1-212ENST00000535941 A0A1W2PPM0 123 aa6.09□□□□□ -1.44
COL21A1-212ENST00000535941 LGALS9O00182 355 aa6.09□□□□□ -1.44
COL21A1-212ENST00000535941 IGHV3-23P01764 117 aa6.09□□□□□ -1.44
COL21A1-212ENST00000535941 APOHP02749 345 aaPredicted RBP6.09□□□□□ -1.44
COL21A1-212ENST00000535941 GNG5P63218 68 aa6.09□□□□□ -1.44
COL21A1-212ENST00000535941 APRG1Q8IVJ8 170 aa6.09□□□□□ -1.44
COL21A1-212ENST00000535941 C16orf95Q9H693 158 aa6.09□□□□□ -1.44
COL21A1-212ENST00000535941 LY6EQ16553 131 aa6.08□□□□□ -1.44
COL21A1-212ENST00000535941 ADAMTSL5Q6ZMM2 481 aa6.08□□□□□ -1.44
COL21A1-212ENST00000535941 GFRA4Q9GZZ7 299 aa6.08□□□□□ -1.44
COL21A1-212ENST00000535941 MS4A6AQ9H2W1 248 aa6.08□□□□□ -1.44
COL21A1-212ENST00000535941 A0A1B0GXF2 115 aa6.08□□□□□ -1.44
COL21A1-212ENST00000535941 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.08□□□□□ -1.44
COL21A1-212ENST00000535941 SLC25A5P05141 298 aaKnown RBP6.08□□□□□ -1.44
COL21A1-212ENST00000535941 RPL7P18124 248 aaKnown RBP6.08□□□□□ -1.44
COL21A1-212ENST00000535941 TCTAP57738 103 aa6.08□□□□□ -1.44
COL21A1-212ENST00000535941 CLEC19AQ6UXS0 136 aa6.08□□□□□ -1.44
COL21A1-212ENST00000535941 TNFRSF18Q9Y5U5 241 aa6.08□□□□□ -1.44
COL21A1-212ENST00000535941 IZUMO1RA6ND01 250 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 PGPA6NDG6 321 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 HOXA3O43365 443 aaPredicted RBP6.07□□□□□ -1.44
COL21A1-212ENST00000535941 TRGV3P03979 118 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 ELANEP08246 267 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 RASL11AQ6T310 242 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 UNQ9165/PRO28630Q6UXU0 137 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 LINC00173Q6ZV60 143 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 EXOC3-AS1Q8N2X6 119 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 FAM110AQ9BQ89 295 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 SPXQ9BT56 116 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 MRPL16Q9NX20 251 aaKnown RBP6.07□□□□□ -1.44
COL21A1-212ENST00000535941 HSPB8Q9UJY1 196 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 CRIP1P50238 77 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 ESM1Q9NQ30 184 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 COX8AP10176 69 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 SAMD5Q5TGI4 173 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 AKAP6Q13023 2319 aa6.07□□□□□ -1.44
COL21A1-212ENST00000535941 NHLRC2Q8NBF2 726 aa6.06□□□□□ -1.44
COL21A1-212ENST00000535941 UBE2E2Q96LR5 201 aa6.06□□□□□ -1.44
COL21A1-212ENST00000535941 SMAD7O15105 426 aaKnown RBP6.06□□□□□ -1.44
COL21A1-212ENST00000535941 TM4SF20Q53R12 229 aa6.06□□□□□ -1.44
COL21A1-212ENST00000535941 GRAMD2BQ96HH9 432 aa6.06□□□□□ -1.44
COL21A1-212ENST00000535941 SLC50A1Q9BRV3 221 aa6.06□□□□□ -1.44
COL21A1-212ENST00000535941 VCX2Q9H322 139 aa6.06□□□□□ -1.44
COL21A1-212ENST00000535941 LRRK2Q5S007 2527 aa6.06□□□□□ -1.44
COL21A1-212ENST00000535941 TPRP12270 2363 aaKnown RBP6.06□□□□□ -1.44
COL21A1-212ENST00000535941 LGALS1P09382 135 aaKnown RBP6.06□□□□□ -1.44
COL21A1-212ENST00000535941 C10orf99Q6UWK7 81 aa6.06□□□□□ -1.44
COL21A1-212ENST00000535941 C3orf56Q8N813 242 aa6.06□□□□□ -1.44
COL21A1-212ENST00000535941 ANAPC13Q9BS18 74 aa6.06□□□□□ -1.44
COL21A1-212ENST00000535941 IGHV1-24A0A0C4DH33 117 aa6.05□□□□□ -1.44
COL21A1-212ENST00000535941 A8MTW9 85 aa6.05□□□□□ -1.44
COL21A1-212ENST00000535941 RNASE1P07998 156 aaKnown RBP6.05□□□□□ -1.44
COL21A1-212ENST00000535941 ETDBQ3ZM63 59 aa6.05□□□□□ -1.44
COL21A1-212ENST00000535941 C9orf47Q6ZRZ4 202 aa6.05□□□□□ -1.44
COL21A1-212ENST00000535941 C2orf91Q6ZV80 131 aa6.05□□□□□ -1.44
COL21A1-212ENST00000535941 OR4X2Q8NGF9 303 aa6.05□□□□□ -1.44
COL21A1-212ENST00000535941 LINC00527Q9UJ94 153 aa6.05□□□□□ -1.44
COL21A1-212ENST00000535941 WNK2Q9Y3S1 2297 aa6.05□□□□□ -1.44
COL21A1-212ENST00000535941 IGHV7-4-1A0A0J9YVY3 117 aa6.05□□□□□ -1.44
COL21A1-212ENST00000535941 DNAJC9-AS1A6NH13 148 aa6.05□□□□□ -1.44
COL21A1-212ENST00000535941 CRXO43186 299 aaPredicted RBP6.05□□□□□ -1.44
COL21A1-212ENST00000535941 SMIM13P0DJ93 91 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 FHL3Q13643 280 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 KLF5Q13887 457 aaPredicted RBP6.04□□□□□ -1.44
COL21A1-212ENST00000535941 DAZAP1Q96EP5 407 aaKnown RBP6.04□□□□□ -1.44
COL21A1-212ENST00000535941 TSPAN13O95857 204 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 CSN3P07498 182 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 OR5AL1P0C617 328 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 SPINK8P0C7L1 97 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 ATP5L2Q7Z4Y8 100 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 DCANP1Q8TF63 244 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 GTSF1Q8WW33 167 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 C20orf173Q96LM9 149 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 METTL26Q96S19 204 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 SPATA25Q9BR10 227 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 CNFNQ9BYD5 112 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 PPDPFQ9H3Y8 114 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 FAM208BQ5VWN6 2430 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 TMEM213A2RRL7 107 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 CHEK1O14757 476 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 GCSHP23434 173 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 GAGE5Q13069 117 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 GAGE6Q13070 117 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 C8orf86Q6ZUL3 223 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 SH2D6Q7Z4S9 175 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 C4orf3Q8WVX3 66 aa6.04□□□□□ -1.44
COL21A1-212ENST00000535941 UNC79Q9P2D8 2635 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 TMEM189A5PLL7 270 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 OR11H12B2RN74 326 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 WFDC2Q14508 124 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 Q6ZSV7 163 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 OR11H1Q8NG94 326 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 OR11H2Q8NH07 326 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 VGLL1Q99990 258 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms