RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 SCRT2Q9NQ03 307 aa14.13□□□□□ -0.15
LTBR-205ENST00000535739 MAP1LC3B2A6NCE7 125 aa14.12□□□□□ -0.15
LTBR-205ENST00000535739 SIVA1O15304 175 aa14.12□□□□□ -0.15
LTBR-205ENST00000535739 PAX4O43316 350 aa14.12□□□□□ -0.15
LTBR-205ENST00000535739 OR7C2O60412 319 aa14.12□□□□□ -0.15
LTBR-205ENST00000535739 IGHV3-53P01767 116 aa14.12□□□□□ -0.15
LTBR-205ENST00000535739 TMEM78Q5T7P6 136 aa14.12□□□□□ -0.15
LTBR-205ENST00000535739 PQLC2Q6ZP29 291 aa14.12□□□□□ -0.15
LTBR-205ENST00000535739 MAP1LC3BQ9GZQ8 125 aa14.12□□□□□ -0.15
LTBR-205ENST00000535739 RGS13O14921 159 aa14.11□□□□□ -0.15
LTBR-205ENST00000535739 CXorf1O96002 111 aa14.11□□□□□ -0.15
LTBR-205ENST00000535739 ARL14EPLP0DKL9 152 aa14.11□□□□□ -0.15
LTBR-205ENST00000535739 FGF8P55075 233 aaPredicted RBP14.11□□□□□ -0.15
LTBR-205ENST00000535739 IBA57Q5T440 356 aaKnown RBP14.11□□□□□ -0.15
LTBR-205ENST00000535739 Q6ZRN7 208 aaPredicted RBP14.11□□□□□ -0.15
LTBR-205ENST00000535739 MRPL16Q9NX20 251 aaKnown RBP14.11□□□□□ -0.15
LTBR-205ENST00000535739 ICOSQ9Y6W8 199 aa14.11□□□□□ -0.15
LTBR-205ENST00000535739 IGHV1OR15-1A0A075B7D0 117 aa14.1□□□□□ -0.15
LTBR-205ENST00000535739 TRAV1-1A0A0B4J248 108 aa14.1□□□□□ -0.15
LTBR-205ENST00000535739 NXPH4O95158 308 aa14.1□□□□□ -0.15
LTBR-205ENST00000535739 NMBP08949 121 aa14.1□□□□□ -0.15
LTBR-205ENST00000535739 NBEAP1P0C6P0 100 aa14.1□□□□□ -0.15
LTBR-205ENST00000535739 ZNF492Q9P255 531 aa14.1□□□□□ -0.15
LTBR-205ENST00000535739 TEX46H3BTG2 121 aa14.09□□□□□ -0.15
LTBR-205ENST00000535739 OR10J4P0C629 311 aa14.09□□□□□ -0.15
LTBR-205ENST00000535739 GCHFRP30047 84 aa14.09□□□□□ -0.15
LTBR-205ENST00000535739 FXYD5Q96DB9 178 aa14.09□□□□□ -0.15
LTBR-205ENST00000535739 A0A1B0GV50 99 aa14.08□□□□□ -0.16
LTBR-205ENST00000535739 RAB14P61106 215 aa14.08□□□□□ -0.16
LTBR-205ENST00000535739 Q8TAT8 98 aa14.08□□□□□ -0.16
LTBR-205ENST00000535739 PRO0255Q9UI72 69 aa14.08□□□□□ -0.16
LTBR-205ENST00000535739 TNFRSF18Q9Y5U5 241 aa14.08□□□□□ -0.16
LTBR-205ENST00000535739 FUSP35637 526 aaKnown RBP eCLIP14.07□□□□□ -0.16
LTBR-205ENST00000535739 CRYBA4P53673 196 aa14.07□□□□□ -0.16
LTBR-205ENST00000535739 UBE2L3P68036 154 aaKnown RBP14.07□□□□□ -0.16
LTBR-205ENST00000535739 IQCF2Q8IXL9 164 aa14.07□□□□□ -0.16
LTBR-205ENST00000535739 SUN5Q8TC36 379 aa14.07□□□□□ -0.16
LTBR-205ENST00000535739 PCNPQ8WW12 178 aaKnown RBP14.07□□□□□ -0.16
LTBR-205ENST00000535739 C8orf49Q96NF6 230 aa14.07□□□□□ -0.16
LTBR-205ENST00000535739 TMEM167BQ9NRX6 74 aa14.07□□□□□ -0.16
LTBR-205ENST00000535739 ZNF138P52744 262 aa14.06□□□□□ -0.16
LTBR-205ENST00000535739 CCL20P78556 96 aa14.06□□□□□ -0.16
LTBR-205ENST00000535739 FHL2Q14192 279 aa14.06□□□□□ -0.16
LTBR-205ENST00000535739 LYPD6BQ8NI32 183 aa14.06□□□□□ -0.16
LTBR-205ENST00000535739 HHLA3Q9XRX5 114 aa14.06□□□□□ -0.16
LTBR-205ENST00000535739 ZNF415Q09FC8 603 aa14.05□□□□□ -0.16
LTBR-205ENST00000535739 MUC21Q5SSG8 566 aa14.05□□□□□ -0.16
LTBR-205ENST00000535739 LYPD5Q6UWN5 251 aa14.05□□□□□ -0.16
LTBR-205ENST00000535739 SLAQ13239 276 aa14.04□□□□□ -0.16
LTBR-205ENST00000535739 MRPL23Q16540 153 aaKnown RBP14.04□□□□□ -0.16
LTBR-205ENST00000535739 RANP62826 216 aaKnown RBP14.03□□□□□ -0.16
LTBR-205ENST00000535739 CLLU1Q5K131 121 aa14.03□□□□□ -0.16
LTBR-205ENST00000535739 MDFICQ9P1T7 246 aa14.03□□□□□ -0.16
LTBR-205ENST00000535739 TRBV7-9A0A0J9YWB2 115 aa14.02□□□□□ -0.17
LTBR-205ENST00000535739 SFTA3P0C7M3 94 aa14.02□□□□□ -0.17
LTBR-205ENST00000535739 CSN1S1P47710 185 aa14.02□□□□□ -0.17
LTBR-205ENST00000535739 PPT1P50897 306 aa14.02□□□□□ -0.17
LTBR-205ENST00000535739 NEGR1Q7Z3B1 354 aa14.02□□□□□ -0.17
LTBR-205ENST00000535739 PGPEP1Q9NXJ5 209 aa14.02□□□□□ -0.17
LTBR-205ENST00000535739 TRGV4A0A0C4DH28 118 aa14.01□□□□□ -0.17
LTBR-205ENST00000535739 ERVFC1-1P60608 527 aa14.01□□□□□ -0.17
LTBR-205ENST00000535739 ZNF479Q96JC4 524 aa14.01□□□□□ -0.17
LTBR-205ENST00000535739 GNG13Q9P2W3 67 aa14.01□□□□□ -0.17
LTBR-205ENST00000535739 FAT1Q14517 4588 aa14.01□□□□□ -0.17
LTBR-205ENST00000535739 RBAKDNA6NC62 111 aa14□□□□□ -0.17
LTBR-205ENST00000535739 EREGO14944 169 aa14□□□□□ -0.17
LTBR-205ENST00000535739 UBE2G2P60604 165 aa14□□□□□ -0.17
LTBR-205ENST00000535739 LYPD1Q8N2G4 141 aa14□□□□□ -0.17
LTBR-205ENST00000535739 A0A1W2PRE2 83 aa13.99□□□□□ -0.17
LTBR-205ENST00000535739 FAM74A7A6NL05 159 aa13.99□□□□□ -0.17
LTBR-205ENST00000535739 K7EQD1 137 aa13.99□□□□□ -0.17
LTBR-205ENST00000535739 PAGE4O60829 102 aa13.99□□□□□ -0.17
LTBR-205ENST00000535739 DNAH10OSP0CZ25 163 aa13.99□□□□□ -0.17
LTBR-205ENST00000535739 TMEM183BQ1AE95 376 aa13.99□□□□□ -0.17
LTBR-205ENST00000535739 TMEM183AQ8IXX5 376 aa13.99□□□□□ -0.17
LTBR-205ENST00000535739 MANBALQ9NQG1 85 aa13.99□□□□□ -0.17
LTBR-205ENST00000535739 LY96Q9Y6Y9 160 aa13.99□□□□□ -0.17
LTBR-205ENST00000535739 PGPA6NDG6 321 aa13.98□□□□□ -0.17
LTBR-205ENST00000535739 IFNA1P01562 189 aa13.98□□□□□ -0.17
LTBR-205ENST00000535739 SRIP30626 198 aa13.98□□□□□ -0.17
LTBR-205ENST00000535739 Q6AWC8 147 aa13.98□□□□□ -0.17
LTBR-205ENST00000535739 NFE4Q86UQ8 179 aa13.98□□□□□ -0.17
LTBR-205ENST00000535739 WFDC10BQ8IUB3 73 aa13.98□□□□□ -0.17
LTBR-205ENST00000535739 OTORQ9NRC9 128 aa13.98□□□□□ -0.17
LTBR-205ENST00000535739 ARL2-SNX15V9GYD0 113 aa13.98□□□□□ -0.17
LTBR-205ENST00000535739 TRAV9-2A0A087WT02 112 aa13.97□□□□□ -0.17
LTBR-205ENST00000535739 EPM2AB3EWF7 344 aa13.97□□□□□ -0.17
LTBR-205ENST00000535739 DIRC3C9JPN6 131 aa13.97□□□□□ -0.17
LTBR-205ENST00000535739 GYPEP15421 78 aa13.97□□□□□ -0.17
LTBR-205ENST00000535739 SUMO1P63165 101 aaKnown RBP13.97□□□□□ -0.17
LTBR-205ENST00000535739 CST9LP1Q5W188 147 aa13.97□□□□□ -0.17
LTBR-205ENST00000535739 RASL10AQ92737 203 aa13.97□□□□□ -0.17
LTBR-205ENST00000535739 SPXQ9BT56 116 aa13.97□□□□□ -0.17
LTBR-205ENST00000535739 NKX6-2Q9C056 277 aaPredicted RBP13.97□□□□□ -0.17
LTBR-205ENST00000535739 HERC1Q15751 4861 aa13.97□□□□□ -0.17
LTBR-205ENST00000535739 A0A087WTM6 91 aa13.96□□□□□ -0.17
LTBR-205ENST00000535739 TAGLN2P37802 199 aaKnown RBP13.96□□□□□ -0.17
LTBR-205ENST00000535739 CDPF1Q6NVV7 123 aa13.96□□□□□ -0.17
LTBR-205ENST00000535739 FAM159AQ6UWV7 190 aa13.96□□□□□ -0.17
LTBR-205ENST00000535739 TRGV11A0A075B6L2 103 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms