RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PSMG4Q5JS54 123 aa9.34□□□□□ -0.91
SCARB1-204ENST00000535005 PATE2Q6UY27 113 aa9.34□□□□□ -0.91
SCARB1-204ENST00000535005 C5orf17Q8NAS9 161 aa9.34□□□□□ -0.91
SCARB1-204ENST00000535005 MUC21A0A0G2JKD1 596 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 MUC21A0A140T8X8 626 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 CBY3A6NI87 242 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 M0QZ24 198 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 P01737 135 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 CAMPP49913 170 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 LYZP61626 148 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 PSG9Q00887 426 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 MUC21Q5SSG8 566 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 LINC00482Q8N8I6 264 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 U3KQE9 123 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 VWFP04275 2813 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 ANK2Q01484 3957 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 A6NDN8 102 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 NPIPB6E9PJ23 425 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 LTAP01374 205 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 PF4P02776 101 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 ORM2P19652 201 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 AMMECR1LQ6DCA0 310 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 S100A7AQ86SG5 101 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 OR9G4Q8NGQ1 327 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 DAZ1Q9NQZ3 744 aaKnown RBP9.33□□□□□ -0.92
SCARB1-204ENST00000535005 PEMTQ9UBM1 199 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 RABAC1Q9UI14 185 aa9.33□□□□□ -0.92
SCARB1-204ENST00000535005 GAGE12BA1L429 117 aa9.32□□□□□ -0.92
SCARB1-204ENST00000535005 TMEM213A2RRL7 107 aa9.32□□□□□ -0.92
SCARB1-204ENST00000535005 OVOL1O14753 267 aa9.32□□□□□ -0.92
SCARB1-204ENST00000535005 CHEK1O14757 476 aa9.32□□□□□ -0.92
SCARB1-204ENST00000535005 S100A7P31151 101 aa9.32□□□□□ -0.92
SCARB1-204ENST00000535005 FOXA3P55318 350 aaPredicted RBP9.32□□□□□ -0.92
SCARB1-204ENST00000535005 TM4SF20Q53R12 229 aa9.32□□□□□ -0.92
SCARB1-204ENST00000535005 BPIFA4PQ86YQ2 179 aa9.32□□□□□ -0.92
SCARB1-204ENST00000535005 OR1B1Q8NGR6 318 aa9.32□□□□□ -0.92
SCARB1-204ENST00000535005 DAZAP1Q96EP5 407 aaKnown RBP9.32□□□□□ -0.92
SCARB1-204ENST00000535005 METTL26Q96S19 204 aa9.32□□□□□ -0.92
SCARB1-204ENST00000535005 SSBP4Q9BWG4 385 aaPredicted RBP9.32□□□□□ -0.92
SCARB1-204ENST00000535005 HIGD1AQ9Y241 93 aa9.32□□□□□ -0.92
SCARB1-204ENST00000535005 IGHV3OR16-8A0A075B7F1 116 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 IGHV7-4-1A0A0J9YVY3 117 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 hDV102S1A0JD36 115 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 H3BRM9 83 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 SIVA1O15304 175 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 SLC25A5P05141 298 aaKnown RBP9.31□□□□□ -0.92
SCARB1-204ENST00000535005 CSN1S1P47710 185 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 Q6AWC8 147 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 UFSP1Q6NVU6 142 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 WFDC9Q8NEX5 89 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 SIGLEC8Q9NYZ4 499 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 SMPXQ9UHP9 88 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
SCARB1-204ENST00000535005 TMEM97Q5BJF2 176 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 C16orf54Q6UWD8 224 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 SPATA3Q8NHX4 192 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 LINC00479Q96M42 142 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 AP1S3Q96PC3 154 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 SHANK2-AS3Q9BTD1 123 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 RNF24Q9Y225 148 aa9.31□□□□□ -0.92
SCARB1-204ENST00000535005 TRAV5A0A0B4J249 113 aa9.3□□□□□ -0.92
SCARB1-204ENST00000535005 C7orf71A4D174 169 aa9.3□□□□□ -0.92
SCARB1-204ENST00000535005 H3BRN7 92 aa9.3□□□□□ -0.92
SCARB1-204ENST00000535005 ZNF207O43670 478 aaKnown RBP9.3□□□□□ -0.92
SCARB1-204ENST00000535005 BUB3O43684 328 aa9.3□□□□□ -0.92
SCARB1-204ENST00000535005 CSN3P07498 182 aa9.3□□□□□ -0.92
SCARB1-204ENST00000535005 PYYP10082 97 aa9.3□□□□□ -0.92
SCARB1-204ENST00000535005 RIGQ13278 110 aa9.3□□□□□ -0.92
SCARB1-204ENST00000535005 LINC00305Q7Z4B0 112 aa9.3□□□□□ -0.92
SCARB1-204ENST00000535005 OR5A1Q8NGJ0 315 aa9.3□□□□□ -0.92
SCARB1-204ENST00000535005 SLC25A39Q9BZJ4 359 aaPredicted RBP9.3□□□□□ -0.92
SCARB1-204ENST00000535005 GAGE10A6NGK3 116 aa9.29□□□□□ -0.92
SCARB1-204ENST00000535005 C9orf118A6NHY6 69 aa9.29□□□□□ -0.92
SCARB1-204ENST00000535005 APOHP02749 345 aaPredicted RBP9.29□□□□□ -0.92
SCARB1-204ENST00000535005 SMIM17P0DL12 118 aa9.29□□□□□ -0.92
SCARB1-204ENST00000535005 MORN5Q5VZ52 161 aa9.29□□□□□ -0.92
SCARB1-204ENST00000535005 ADAMTSL5Q6ZMM2 481 aa9.29□□□□□ -0.92
SCARB1-204ENST00000535005 OR10AG1Q8NH19 301 aa9.29□□□□□ -0.92
SCARB1-204ENST00000535005 BMI1P35226 326 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 HSD52Q0P140 79 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 C2orf91Q6ZV80 131 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 GTSF1Q8WW33 167 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 RHPN1-AS1Q9BWJ2 59 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 OTORQ9NRC9 128 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 AP5S1Q9NUS5 200 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 PGPA6NDG6 321 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 CIDEAO60543 219 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 TCRAP04437 139 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 NBEAP1P0C6P0 100 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 EDN2P20800 178 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 FER1L6-AS1Q8NA97 138 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 PGLYRP4Q96LB8 373 aa9.28□□□□□ -0.92
SCARB1-204ENST00000535005 TRAV8-6A0A0B4J262 113 aa9.27□□□□□ -0.93
SCARB1-204ENST00000535005 K7EP34 96 aa9.27□□□□□ -0.93
SCARB1-204ENST00000535005 LGALS9BQ3B8N2 356 aa9.27□□□□□ -0.93
SCARB1-204ENST00000535005 LGALS9CQ6DKI2 356 aa9.27□□□□□ -0.93
SCARB1-204ENST00000535005 LINC00173Q6ZV60 143 aa9.27□□□□□ -0.93
SCARB1-204ENST00000535005 Q86TA4 180 aa9.27□□□□□ -0.93
SCARB1-204ENST00000535005 GLMPQ8WWB7 406 aa9.27□□□□□ -0.93
SCARB1-204ENST00000535005 TMEM14CQ9P0S9 112 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms