RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 LENEPQ9Y5L5 61 aa8.74□□□□□ -1.01
USF1-211ENST00000534633 MAPKAPK5-AS1Q8N8E1 139 aa8.73□□□□□ -1.01
USF1-211ENST00000534633 CYB561D1Q8N8Q1 229 aa8.73□□□□□ -1.01
USF1-211ENST00000534633 NKX6-2Q9C056 277 aaPredicted RBP8.73□□□□□ -1.01
USF1-211ENST00000534633 NOP10Q9NPE3 64 aaKnown RBP8.73□□□□□ -1.01
USF1-211ENST00000534633 ARL2-SNX15V9GYD0 113 aa8.73□□□□□ -1.01
USF1-211ENST00000534633 SERTM2A0A1B0GWG4 89 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 PEX7O00628 323 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 IFNA7P01567 189 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 ZNF80P51504 273 aaPredicted RBP8.72□□□□□ -1.01
USF1-211ENST00000534633 FLI1Q01543 452 aaPredicted RBP8.72□□□□□ -1.01
USF1-211ENST00000534633 TTC32Q5I0X7 151 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 CST9LP1Q5W188 147 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 Q6AWC8 147 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 TMEM75Q8N9X5 138 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 C8orf49Q96NF6 230 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 LINC00467Q9BRT7 94 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 Q9H8V8 135 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 TP53TG3Q9ULZ0 132 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 KLF12Q9Y4X4 402 aa8.72□□□□□ -1.01
USF1-211ENST00000534633 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.01
USF1-211ENST00000534633 F6UZH7 168 aa8.71□□□□□ -1.02
USF1-211ENST00000534633 OR5I1Q13606 314 aa8.71□□□□□ -1.02
USF1-211ENST00000534633 PRNTQ86SH4 94 aa8.71□□□□□ -1.02
USF1-211ENST00000534633 LINC00612Q8N6U2 182 aa8.71□□□□□ -1.02
USF1-211ENST00000534633 C11orf72Q8NBR9 251 aa8.71□□□□□ -1.02
USF1-211ENST00000534633 LYPD6BQ8NI32 183 aa8.71□□□□□ -1.02
USF1-211ENST00000534633 HIST1H2BAQ96A08 127 aa8.71□□□□□ -1.02
USF1-211ENST00000534633 PYGO2Q9BRQ0 406 aa8.71□□□□□ -1.02
USF1-211ENST00000534633 TREM1Q9NP99 234 aa8.71□□□□□ -1.02
USF1-211ENST00000534633 TRAV26-1A0A087WT03 109 aa8.7□□□□□ -1.02
USF1-211ENST00000534633 CRIP1P50238 77 aa8.7□□□□□ -1.02
USF1-211ENST00000534633 UPK3BQ9BT76 320 aa8.7□□□□□ -1.02
USF1-211ENST00000534633 GNG13Q9P2W3 67 aa8.7□□□□□ -1.02
USF1-211ENST00000534633 C11orf21Q9P2W6 132 aa8.7□□□□□ -1.02
USF1-211ENST00000534633 IGHV1OR15-1A0A075B7D0 117 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 SCO2A0A1W2PP80 73 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 SNURFLB1AK76 121 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 H3BNG1 76 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 K7EQM0 130 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 PPT1P50897 306 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 ANXA2RQ3ZCQ2 193 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 MUC21Q5SSG8 566 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 SPATA12Q7Z6I5 190 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 EIF4E3Q8N5X7 224 aaKnown RBP8.69□□□□□ -1.02
USF1-211ENST00000534633 TCEAL7Q9BRU2 100 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 KRTAP1-5Q9BYS1 174 aa8.69□□□□□ -1.02
USF1-211ENST00000534633 TRBV6-1A0A0K0K1D8 114 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 A0A1W2PPQ1 181 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 GAGE12BA1L429 117 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 FBLL1A6NHQ2 334 aaKnown RBP8.68□□□□□ -1.02
USF1-211ENST00000534633 GAGE7O76087 117 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 GAGE12FP0CL80 117 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 GAGE12GP0CL81 117 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 GAGE12IP0CL82 117 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 BTF3P20290 206 aaKnown RBP8.68□□□□□ -1.02
USF1-211ENST00000534633 TMEM183BQ1AE95 376 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 COX8CQ7Z4L0 72 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 Q86TA4 180 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 Q8N1X5 172 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 MANBALQ9NQG1 85 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 GSN-AS1Q9NRJ2 163 aa8.68□□□□□ -1.02
USF1-211ENST00000534633 LRP1BQ9NZR2 4599 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 A0A0J9YY99 117 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 GNRH2O43555 120 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 GCGP01275 180 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 LTAP01374 205 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 HOXA5P20719 270 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 ESRGQ1W209 222 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 TDRG1Q3Y452 100 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 SAPCD1Q5SSQ6 148 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 TEX261Q6UWH6 196 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 FMC1Q96HJ9 113 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 MDFICQ9P1T7 246 aa8.67□□□□□ -1.02
USF1-211ENST00000534633 MRPS16Q9Y3D3 137 aaKnown RBP8.67□□□□□ -1.02
USF1-211ENST00000534633 TRAV21A0A0B4J279 112 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 RGS13O14921 159 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 BCL2P10415 239 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 BLOC1S1P78537 153 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 DAZ2Q13117 558 aaKnown RBP8.66□□□□□ -1.02
USF1-211ENST00000534633 SMUG1Q53HV7 270 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 ZNF680Q8NEM1 530 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 C11orf52Q96A22 123 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 ZC2HC1AQ96GY0 325 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 NDFIP1Q9BT67 221 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 DERL1Q9BUN8 251 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 MLST8Q9BVC4 326 aa8.66□□□□□ -1.02
USF1-211ENST00000534633 TEX46H3BTG2 121 aa8.65□□□□□ -1.02
USF1-211ENST00000534633 PFN1P07737 140 aaKnown RBP8.65□□□□□ -1.02
USF1-211ENST00000534633 TCL1AP56279 114 aa8.65□□□□□ -1.02
USF1-211ENST00000534633 MEF2BQ02080 365 aaPredicted RBP8.65□□□□□ -1.02
USF1-211ENST00000534633 IBA57Q5T440 356 aaKnown RBP8.65□□□□□ -1.02
USF1-211ENST00000534633 FAM159AQ6UWV7 190 aa8.65□□□□□ -1.02
USF1-211ENST00000534633 PCNPQ8WW12 178 aaKnown RBP8.65□□□□□ -1.02
USF1-211ENST00000534633 SCRT2Q9NQ03 307 aa8.65□□□□□ -1.02
USF1-211ENST00000534633 ZFP30Q9Y2G7 519 aa8.65□□□□□ -1.02
USF1-211ENST00000534633 IGKV3D-20A0A0C4DH25 116 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 IGHV3-16A0A0C4DH30 117 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 SPINK4O60575 86 aa8.64□□□□□ -1.03
USF1-211ENST00000534633 TYMSP04818 313 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms