RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 AMN1Q8IY45 258 aa10.04□□□□□ -0.8
BEST1-208ENST00000534553 ITPR2Q14571 2701 aa10.04□□□□□ -0.8
BEST1-208ENST00000534553 MYO9AB2RTY4 2548 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 D6R8Y8 96 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 S100A4P26447 101 aaKnown RBP10.03□□□□□ -0.8
BEST1-208ENST00000534553 CKS2P33552 79 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 RNASE4P34096 147 aaKnown RBP10.03□□□□□ -0.8
BEST1-208ENST00000534553 TFPI2P48307 235 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 PKIAP61925 76 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 SPANXN1Q5VSR9 72 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 C18orf65Q6ZTR6 163 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 DYNLRB2Q8TF09 96 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 PRELID3AQ96N28 172 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 SIGLEC8Q9NYZ4 499 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 TRAV25A0A0B4J276 109 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 MRPL51Q4U2R6 128 aaKnown RBP10.03□□□□□ -0.8
BEST1-208ENST00000534553 LINC01006Q8NI28 216 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 AP5S1Q9NUS5 200 aa10.03□□□□□ -0.8
BEST1-208ENST00000534553 CDPF1Q6NVV7 123 aa10.02□□□□□ -0.81
BEST1-208ENST00000534553 ADAMTSL5Q6ZMM2 481 aa10.02□□□□□ -0.81
BEST1-208ENST00000534553 FA2HQ7L5A8 372 aa10.02□□□□□ -0.81
BEST1-208ENST00000534553 DLX4Q92988 240 aaPredicted RBP10.02□□□□□ -0.81
BEST1-208ENST00000534553 URB1-AS1Q96HZ7 61 aa10.02□□□□□ -0.81
BEST1-208ENST00000534553 HECTD1Q9ULT8 2610 aa10.02□□□□□ -0.81
BEST1-208ENST00000534553 C7orf71A4D174 169 aa10.01□□□□□ -0.81
BEST1-208ENST00000534553 CSN3P07498 182 aa10.01□□□□□ -0.81
BEST1-208ENST00000534553 CDKN1BP46527 198 aa10.01□□□□□ -0.81
BEST1-208ENST00000534553 DEFB1P60022 68 aa10.01□□□□□ -0.81
BEST1-208ENST00000534553 TDRG1Q3Y452 100 aa10.01□□□□□ -0.81
BEST1-208ENST00000534553 FAM159AQ6UWV7 190 aa10.01□□□□□ -0.81
BEST1-208ENST00000534553 FAM19A2Q8N3H0 131 aa10.01□□□□□ -0.81
BEST1-208ENST00000534553 OR10AG1Q8NH19 301 aa10.01□□□□□ -0.81
BEST1-208ENST00000534553 PRSS3P2Q8NHM4 247 aa10.01□□□□□ -0.81
BEST1-208ENST00000534553 SPAG8Q99932 426 aaPredicted RBP10.01□□□□□ -0.81
BEST1-208ENST00000534553 OR4C46A6NHA9 309 aa10□□□□□ -0.81
BEST1-208ENST00000534553 H3BVH4 76 aa10□□□□□ -0.81
BEST1-208ENST00000534553 J3KRW8 73 aa10□□□□□ -0.81
BEST1-208ENST00000534553 KRTDAPP60985 99 aa10□□□□□ -0.81
BEST1-208ENST00000534553 ANXA2RQ3ZCQ2 193 aa10□□□□□ -0.81
BEST1-208ENST00000534553 SCRT2Q9NQ03 307 aa10□□□□□ -0.81
BEST1-208ENST00000534553 SONP18583 2426 aaKnown RBP10□□□□□ -0.81
BEST1-208ENST00000534553 IGHV1-24A0A0C4DH33 117 aa10□□□□□ -0.81
BEST1-208ENST00000534553 MUC21A0A0G2JKD1 596 aa10□□□□□ -0.81
BEST1-208ENST00000534553 MUC21A0A140T8X8 626 aa10□□□□□ -0.81
BEST1-208ENST00000534553 CCL24O00175 119 aa10□□□□□ -0.81
BEST1-208ENST00000534553 TCF21O43680 179 aa10□□□□□ -0.81
BEST1-208ENST00000534553 FOSL1P15407 271 aa10□□□□□ -0.81
BEST1-208ENST00000534553 MUC21Q5SSG8 566 aa10□□□□□ -0.81
BEST1-208ENST00000534553 RNF185Q96GF1 192 aa10□□□□□ -0.81
BEST1-208ENST00000534553 RAX2Q96IS3 184 aa10□□□□□ -0.81
BEST1-208ENST00000534553 MSRB1Q9NZV6 116 aa10□□□□□ -0.81
BEST1-208ENST00000534553 HSPB8Q9UJY1 196 aa10□□□□□ -0.81
BEST1-208ENST00000534553 PHLDA3Q9Y5J5 127 aa10□□□□□ -0.81
BEST1-208ENST00000534553 LEPROTL1O95214 131 aa9.99□□□□□ -0.81
BEST1-208ENST00000534553 LY6G6DO95868 133 aa9.99□□□□□ -0.81
BEST1-208ENST00000534553 CD28P10747 220 aa9.99□□□□□ -0.81
BEST1-208ENST00000534553 BTF3P20290 206 aaKnown RBP9.99□□□□□ -0.81
BEST1-208ENST00000534553 SSTP61278 116 aa9.99□□□□□ -0.81
BEST1-208ENST00000534553 PMCHL1Q16048 86 aa9.99□□□□□ -0.81
BEST1-208ENST00000534553 DEFB114Q30KQ6 69 aa9.99□□□□□ -0.81
BEST1-208ENST00000534553 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
BEST1-208ENST00000534553 MAP1LC3AQ9H492 121 aa9.99□□□□□ -0.81
BEST1-208ENST00000534553 A8MTW9 85 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 HLA-DRB4P13762 266 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 TMEM61Q8N0U2 210 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 MRAP2Q96G30 205 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 NXT2Q9NPJ8 142 aaKnown RBP9.98□□□□□ -0.81
BEST1-208ENST00000534553 SELENOKQ9Y6D0 94 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 HLA-DRB4X5D2U9 266 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 C3orf79P0CE67 100 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 CD33P20138 364 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 PRR31Q5SQ13 230 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 DEFB125Q8N687 156 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 CITED2Q99967 270 aaPredicted RBP9.98□□□□□ -0.81
BEST1-208ENST00000534553 RNF114Q9Y508 228 aa9.98□□□□□ -0.81
BEST1-208ENST00000534553 CRXO43186 299 aaPredicted RBP9.97□□□□□ -0.81
BEST1-208ENST00000534553 NXPH4O95158 308 aa9.97□□□□□ -0.81
BEST1-208ENST00000534553 EVI2AP22794 236 aa9.97□□□□□ -0.81
BEST1-208ENST00000534553 AP1S3Q96PC3 154 aa9.97□□□□□ -0.81
BEST1-208ENST00000534553 DUX3Q96PT4 197 aa9.97□□□□□ -0.81
BEST1-208ENST00000534553 TMEM70Q9BUB7 260 aa9.97□□□□□ -0.81
BEST1-208ENST00000534553 C20orf202A1L168 122 aa9.96□□□□□ -0.81
BEST1-208ENST00000534553 DEFB131AP59861 70 aa9.96□□□□□ -0.81
BEST1-208ENST00000534553 Q6ZQT7 251 aa9.96□□□□□ -0.81
BEST1-208ENST00000534553 ZNF664Q8N3J9 261 aa9.96□□□□□ -0.81
BEST1-208ENST00000534553 CLUHP3Q96NS8 147 aa9.96□□□□□ -0.81
BEST1-208ENST00000534553 DPH3P1Q9H4G8 78 aa9.96□□□□□ -0.81
BEST1-208ENST00000534553 TRAV12-3A0A0B4J271 114 aa9.96□□□□□ -0.82
BEST1-208ENST00000534553 PRSS47A8MTI9 375 aa9.96□□□□□ -0.82
BEST1-208ENST00000534553 PPP1R17O96001 155 aa9.96□□□□□ -0.82
BEST1-208ENST00000534553 NPYP01303 97 aa9.96□□□□□ -0.82
BEST1-208ENST00000534553 RNASE3P12724 160 aaKnown RBP9.96□□□□□ -0.82
BEST1-208ENST00000534553 IFI27P40305 119 aaPredicted RBP9.96□□□□□ -0.82
BEST1-208ENST00000534553 CMC4P56277 68 aaPredicted RBP9.96□□□□□ -0.82
BEST1-208ENST00000534553 PROK1P58294 105 aa9.96□□□□□ -0.82
BEST1-208ENST00000534553 AMTNQ6UX39 209 aa9.96□□□□□ -0.82
BEST1-208ENST00000534553 VAMP8Q9BV40 100 aa9.96□□□□□ -0.82
BEST1-208ENST00000534553 MAP1LC3CQ9BXW4 147 aa9.96□□□□□ -0.82
BEST1-208ENST00000534553 HIVEP2P31629 2446 aa9.95□□□□□ -0.82
BEST1-208ENST00000534553 IGHV1OR15-1A0A075B7D0 117 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms