RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 LOC389332A0A1B0GUA5 103 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 ZNF98A6NK75 572 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 TMEM14DPA8MWL7 114 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 RPP14O95059 124 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 CRYZL1O95825 349 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 NPPCP23582 126 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 AP2S1P53680 142 aaPredicted RBP2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 HMGN3Q15651 99 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 WHAMMP3Q1A5X7 153 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 Q499Y3 187 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 HSP90B2PQ58FF3 399 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 LINC01556Q5JQF7 62 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 GDF5OSQ5U4N7 250 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 SPATA31B1PQ5VZV4 182 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 ZNF322Q6U7Q0 402 aaPredicted RBP2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 SELENOHQ8IZQ5 122 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 ZNF555Q8NEP9 628 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 TNFAIP8L1Q8WVP5 186 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 DYDC1Q8WWB3 177 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 RMI2Q96E14 147 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 YIPF6Q96EC8 236 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 CPNE2Q96FN4 548 aaPredicted RBP2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 FMC1Q96HJ9 113 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 APOL4Q9BPW4 351 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 PAIP2Q9BPZ3 127 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 THTPAQ9BU02 230 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 OR51E2Q9H255 320 aa2.36□□□□□ -2.03
ECHDC1-223ENST00000534442 IGHV3-21A0A0B4J1V1 117 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 BIRC5O15392 142 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 GADD45GO95257 159 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 LGALS3P17931 250 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 CELP19835 753 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 ETV6P41212 452 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 CXCR4P61073 352 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 SNRPGP62308 76 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 CD164Q04900 197 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 TRAM1Q15629 374 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 DNLZQ5SXM8 178 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 IGFL1Q6UW32 110 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 TOMM20LQ6UXN7 152 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 FOXI2Q6ZQN5 318 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 RASSF6Q6ZTQ3 369 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 TMEM144Q7Z5S9 345 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 RNF182Q8N6D2 247 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 VSTM2AQ8TAG5 236 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 MRPL30Q8TCC3 161 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 ATP6V1G3Q96LB4 118 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 GPER1Q99527 375 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 FAM107BQ9H098 131 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 METTL9Q9H1A3 318 aa2.35□□□□□ -2.03
ECHDC1-223ENST00000534442 IGLC7A0M8Q6 106 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 K7EIM0 57 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 NDUFS6O75380 124 aaKnown RBP2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 CDK1P06493 297 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 GTF2F2P13984 249 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 HTN1P15515 57 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 HTR2BP41595 481 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 OR10A3P58181 314 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 BAXQ07812 192 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 SSX1Q16384 188 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 BSXQ3C1V8 233 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 TNFAIP8L3Q5GJ75 292 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 TMEM244Q5VVB8 128 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 FAM104BQ5XKR9 115 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 IFT20Q8IY31 132 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 GDPD1Q8N9F7 314 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 OR8J3Q8NGG0 315 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 ATP6V0E2Q8NHE4 81 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 DPH3Q96FX2 82 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 ZC2HC1AQ96GY0 325 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 RETNLBQ9BQ08 111 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 DIABLOQ9NR28 239 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 ARMC1Q9NVT9 282 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 ZNF706Q9Y5V0 76 aaPredicted RBP2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 URGCP-MRPS24S4R325 110 aa2.34□□□□□ -2.03
ECHDC1-223ENST00000534442 TRAV8-3A0A0A6YYJ7 113 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 UPK2O00526 184 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 GYG2O15488 501 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 OR5AC1P0C628 307 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 CRYBB3P26998 211 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 DEFB1P60022 68 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 KRTAP13-3Q3SY46 172 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 FAM78BQ5VT40 261 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 EBLN2Q6P2I7 272 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 OR5D14Q8NGL3 314 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 OR5H2Q8NGV7 314 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 TMEM263Q8WUH6 116 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 LINC01587Q99440 93 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 S100A13Q99584 98 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 DCUN1D5Q9BTE7 237 aa2.33□□□□□ -2.04
ECHDC1-223ENST00000534442 TRGV2A0A075B6R0 118 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 TRAV8-1A0A0A6YYK1 113 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 C9JQL5 133 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 ZNF670-ZNF695F2Z2N8 137 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 CRXO43186 299 aaPredicted RBP2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 GNG7O60262 68 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 SHBGP04278 402 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 CD36P16671 472 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 SRIP30626 198 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms