RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 TRAV21A0A0B4J279 112 aa11.34□□□□□ -0.59
CAPRIN1-216ENST00000534042 TIRAPP58753 221 aa11.34□□□□□ -0.59
CAPRIN1-216ENST00000534042 MBD2Q9UBB5 411 aa11.34□□□□□ -0.59
CAPRIN1-216ENST00000534042 FAM229AH3BQW9 127 aa11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 EIF3GO75821 320 aaKnown RBP eCLIP11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 TYMSP04818 313 aa11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 GATA1P15976 413 aaPredicted RBP11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 GOLT1AQ6ZVE7 132 aa11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 NTN5Q8WTR8 489 aaPredicted RBP11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 PPP1R1CQ8WVI7 109 aa11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 S100ZQ8WXG8 99 aa11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 KCNS1Q96KK3 526 aa11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 SDF2L1Q9HCN8 221 aa11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 TREM1Q9NP99 234 aa11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 HSPB11Q9Y547 144 aa11.33□□□□□ -0.6
CAPRIN1-216ENST00000534042 HERC1Q15751 4861 aa11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 TRAV8-6A0A0B4J262 113 aa11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 LRCOL1A6NCL2 159 aa11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 F6UZH7 168 aa11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 PFN1P07737 140 aaKnown RBP11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 LINC00299Q6ZSB3 139 aa11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 ARL6IP6Q8N6S5 226 aa11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 SMIM3Q9BZL3 60 aa11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
CAPRIN1-216ENST00000534042 FBLL1A6NHQ2 334 aaKnown RBP11.31□□□□□ -0.6
CAPRIN1-216ENST00000534042 IBA57-AS1B1ANH7 110 aa11.31□□□□□ -0.6
CAPRIN1-216ENST00000534042 H2BFSP57053 126 aa11.31□□□□□ -0.6
CAPRIN1-216ENST00000534042 HAMPP81172 84 aa11.31□□□□□ -0.6
CAPRIN1-216ENST00000534042 PQLC2Q6ZP29 291 aa11.31□□□□□ -0.6
CAPRIN1-216ENST00000534042 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
CAPRIN1-216ENST00000534042 TRAV8-1A0A0A6YYK1 113 aa11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 A0A1W2PPV4 95 aa11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 INMT-MINDY4F8WBC2 141 aa11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 MPC2O95563 127 aa11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 PET100P0DJ07 73 aa11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 RPL12P30050 165 aaKnown RBP11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 ACOT6Q3I5F7 207 aaPredicted RBP11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 OR10J3Q5JRS4 329 aa11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 ASB13Q8WXK3 278 aa11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 PRADC1Q9BSG0 188 aa11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 Q9HAA7 133 aa11.3□□□□□ -0.6
CAPRIN1-216ENST00000534042 Q6ZSN1 163 aa11.29□□□□□ -0.6
CAPRIN1-216ENST00000534042 SLC25A29Q8N8R3 303 aa11.29□□□□□ -0.6
CAPRIN1-216ENST00000534042 FAT1Q14517 4588 aa11.29□□□□□ -0.6
CAPRIN1-216ENST00000534042 CIDEAO60543 219 aa11.28□□□□□ -0.6
CAPRIN1-216ENST00000534042 UPK1BO75841 260 aa11.28□□□□□ -0.6
CAPRIN1-216ENST00000534042 GNG5P63218 68 aa11.28□□□□□ -0.6
CAPRIN1-216ENST00000534042 RHOHQ15669 191 aa11.28□□□□□ -0.6
CAPRIN1-216ENST00000534042 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
CAPRIN1-216ENST00000534042 Q8N814 137 aa11.28□□□□□ -0.6
CAPRIN1-216ENST00000534042 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
CAPRIN1-216ENST00000534042 TRBV6-4A0A1B0GX49 114 aa11.27□□□□□ -0.61
CAPRIN1-216ENST00000534042 RS1O15537 224 aa11.27□□□□□ -0.61
CAPRIN1-216ENST00000534042 IGHV3-30P01768 117 aa11.27□□□□□ -0.61
CAPRIN1-216ENST00000534042 IGHV3-33P01772 117 aa11.27□□□□□ -0.61
CAPRIN1-216ENST00000534042 IGHV3-30-3P0DP02 117 aa11.27□□□□□ -0.61
CAPRIN1-216ENST00000534042 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.61
CAPRIN1-216ENST00000534042 LELP1Q5T871 98 aa11.27□□□□□ -0.61
CAPRIN1-216ENST00000534042 CFAP126Q5VTH2 177 aa11.27□□□□□ -0.61
CAPRIN1-216ENST00000534042 SGK494Q96LW2 274 aa11.27□□□□□ -0.61
CAPRIN1-216ENST00000534042 IGHV3-73A0A0B4J1V6 119 aa11.26□□□□□ -0.61
CAPRIN1-216ENST00000534042 HMGB3O15347 200 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-216ENST00000534042 SSNA1O43805 119 aa11.26□□□□□ -0.61
CAPRIN1-216ENST00000534042 RAB2AP61019 212 aa11.26□□□□□ -0.61
CAPRIN1-216ENST00000534042 WFDC1Q9HC57 220 aa11.26□□□□□ -0.61
CAPRIN1-216ENST00000534042 SRRM2Q9UQ35 2752 aaKnown RBP11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 VPS13BQ7Z7G8 4022 aa11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 SERTM2A0A1B0GWG4 89 aa11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 TAAR5O14804 337 aa11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 DPPA3Q6W0C5 159 aa11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 OR10G9Q8NGN4 311 aa11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 OR10G7Q8NGN6 311 aa11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 ATP6V0E2Q8NHE4 81 aa11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 MARVELD1Q9BSK0 173 aa11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 TM2D2Q9BX73 214 aa11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 GTSF1LQ9H1H1 148 aa11.25□□□□□ -0.61
CAPRIN1-216ENST00000534042 ZNF80P51504 273 aaPredicted RBP11.24□□□□□ -0.61
CAPRIN1-216ENST00000534042 IFITM3Q01628 133 aa11.24□□□□□ -0.61
CAPRIN1-216ENST00000534042 C9orf85Q96MD7 179 aa11.24□□□□□ -0.61
CAPRIN1-216ENST00000534042 FAM30AQ9NZY2 134 aa11.24□□□□□ -0.61
CAPRIN1-216ENST00000534042 C11orf21Q9P2W6 132 aa11.24□□□□□ -0.61
CAPRIN1-216ENST00000534042 K7EQM0 130 aa11.23□□□□□ -0.61
CAPRIN1-216ENST00000534042 GCGP01275 180 aa11.23□□□□□ -0.61
CAPRIN1-216ENST00000534042 C1QBP02746 253 aa11.23□□□□□ -0.61
CAPRIN1-216ENST00000534042 ARL14EPLP0DKL9 152 aa11.23□□□□□ -0.61
CAPRIN1-216ENST00000534042 MGST1P10620 155 aaKnown RBP11.23□□□□□ -0.61
CAPRIN1-216ENST00000534042 LAGE3Q14657 143 aa11.23□□□□□ -0.61
CAPRIN1-216ENST00000534042 C5orf17Q8NAS9 161 aa11.23□□□□□ -0.61
CAPRIN1-216ENST00000534042 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
CAPRIN1-216ENST00000534042 TCRAP04437 139 aa11.22□□□□□ -0.61
CAPRIN1-216ENST00000534042 CDC34P49427 236 aaPredicted RBP11.22□□□□□ -0.61
CAPRIN1-216ENST00000534042 ZNF506Q5JVG8 444 aa11.22□□□□□ -0.61
CAPRIN1-216ENST00000534042 PTH2Q96A98 100 aa11.22□□□□□ -0.61
CAPRIN1-216ENST00000534042 PSG8Q9UQ74 426 aa11.22□□□□□ -0.61
CAPRIN1-216ENST00000534042 J3QL48 77 aa11.21□□□□□ -0.61
CAPRIN1-216ENST00000534042 ZFP69Q49AA0 526 aa11.21□□□□□ -0.61
CAPRIN1-216ENST00000534042 SMUG1Q53HV7 270 aa11.21□□□□□ -0.61
CAPRIN1-216ENST00000534042 TMEM75Q8N9X5 138 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms