RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 M0R2P5 195 aa10.6□□□□□ -0.71
CPSF1-211ENST00000533492 GIPP09681 153 aaPredicted RBP10.6□□□□□ -0.71
CPSF1-211ENST00000533492 SRIP30626 198 aa10.6□□□□□ -0.71
CPSF1-211ENST00000533492 Q5BKY6 102 aa10.6□□□□□ -0.71
CPSF1-211ENST00000533492 C5orf17Q8NAS9 161 aa10.6□□□□□ -0.71
CPSF1-211ENST00000533492 OR4C5Q8NGB2 326 aa10.6□□□□□ -0.71
CPSF1-211ENST00000533492 TMEM167BQ9NRX6 74 aa10.6□□□□□ -0.71
CPSF1-211ENST00000533492 TNFSF18Q9UNG2 199 aa10.6□□□□□ -0.71
CPSF1-211ENST00000533492 BORCS7-ASMTA0A0B4J1R7 106 aa10.59□□□□□ -0.71
CPSF1-211ENST00000533492 TRAV4A0A0B4J268 109 aa10.59□□□□□ -0.71
CPSF1-211ENST00000533492 IGHV3-16A0A0C4DH30 117 aa10.59□□□□□ -0.71
CPSF1-211ENST00000533492 CXorf1O96002 111 aa10.59□□□□□ -0.71
CPSF1-211ENST00000533492 ORM1P02763 201 aa10.59□□□□□ -0.71
CPSF1-211ENST00000533492 TCRAP04437 139 aa10.59□□□□□ -0.71
CPSF1-211ENST00000533492 TYMSP04818 313 aa10.59□□□□□ -0.71
CPSF1-211ENST00000533492 GYPEP15421 78 aa10.59□□□□□ -0.71
CPSF1-211ENST00000533492 SUMO1P63165 101 aaKnown RBP10.59□□□□□ -0.71
CPSF1-211ENST00000533492 SPATA12Q7Z6I5 190 aa10.59□□□□□ -0.71
CPSF1-211ENST00000533492 DYNC1H1Q14204 4646 aaKnown RBP10.59□□□□□ -0.71
CPSF1-211ENST00000533492 FXYD6-FXYD2A0A087WZ82 144 aa10.58□□□□□ -0.72
CPSF1-211ENST00000533492 K7EQD1 137 aa10.58□□□□□ -0.72
CPSF1-211ENST00000533492 LINC00315P59091 139 aa10.58□□□□□ -0.72
CPSF1-211ENST00000533492 SUN5Q8TC36 379 aa10.58□□□□□ -0.72
CPSF1-211ENST00000533492 SH3BGRL3Q9H299 93 aa10.58□□□□□ -0.72
CPSF1-211ENST00000533492 PSG8Q9UQ74 426 aa10.58□□□□□ -0.72
CPSF1-211ENST00000533492 TRAV9-2A0A087WT02 112 aa10.57□□□□□ -0.72
CPSF1-211ENST00000533492 C9JCJ5 164 aa10.57□□□□□ -0.72
CPSF1-211ENST00000533492 TAAR5O14804 337 aa10.57□□□□□ -0.72
CPSF1-211ENST00000533492 ZFP69Q49AA0 526 aa10.57□□□□□ -0.72
CPSF1-211ENST00000533492 RPL7L1Q6DKI1 246 aaKnown RBP10.57□□□□□ -0.72
CPSF1-211ENST00000533492 TXNDC17Q9BRA2 123 aa10.57□□□□□ -0.72
CPSF1-211ENST00000533492 EPDR1Q9UM22 224 aa10.57□□□□□ -0.72
CPSF1-211ENST00000533492 GCGP01275 180 aa10.56□□□□□ -0.72
CPSF1-211ENST00000533492 FLI1Q01543 452 aaPredicted RBP10.56□□□□□ -0.72
CPSF1-211ENST00000533492 SMUG1Q53HV7 270 aa10.56□□□□□ -0.72
CPSF1-211ENST00000533492 PRNTQ86SH4 94 aa10.56□□□□□ -0.72
CPSF1-211ENST00000533492 OR2T35Q8NGX2 323 aa10.56□□□□□ -0.72
CPSF1-211ENST00000533492 LY96Q9Y6Y9 160 aa10.56□□□□□ -0.72
CPSF1-211ENST00000533492 RNF222A6NCQ9 220 aa10.55□□□□□ -0.72
CPSF1-211ENST00000533492 FBLL1A6NHQ2 334 aaKnown RBP10.55□□□□□ -0.72
CPSF1-211ENST00000533492 ZNF80P51504 273 aaPredicted RBP10.55□□□□□ -0.72
CPSF1-211ENST00000533492 CYB561D1Q8N8Q1 229 aa10.55□□□□□ -0.72
CPSF1-211ENST00000533492 A0A1W2PRE2 83 aa10.54□□□□□ -0.72
CPSF1-211ENST00000533492 GGTLC3B5MD39 225 aa10.54□□□□□ -0.72
CPSF1-211ENST00000533492 PFN1P07737 140 aaKnown RBP10.54□□□□□ -0.72
CPSF1-211ENST00000533492 ZNF876PQ49A33 203 aa10.54□□□□□ -0.72
CPSF1-211ENST00000533492 SAPCD1Q5SSQ6 148 aa10.54□□□□□ -0.72
CPSF1-211ENST00000533492 SH2D6Q7Z4S9 175 aa10.54□□□□□ -0.72
CPSF1-211ENST00000533492 TMEM75Q8N9X5 138 aa10.54□□□□□ -0.72
CPSF1-211ENST00000533492 CTXND1A0A1B0GTU2 59 aa10.53□□□□□ -0.72
CPSF1-211ENST00000533492 EREGO14944 169 aa10.53□□□□□ -0.72
CPSF1-211ENST00000533492 CDK2AP2O75956 126 aa10.53□□□□□ -0.72
CPSF1-211ENST00000533492 IFNA7P01567 189 aa10.53□□□□□ -0.72
CPSF1-211ENST00000533492 IGLV2-11P01706 119 aa10.53□□□□□ -0.72
CPSF1-211ENST00000533492 EVI2AP22794 236 aa10.53□□□□□ -0.72
CPSF1-211ENST00000533492 AKR1C8PQ5T2L2 129 aa10.53□□□□□ -0.72
CPSF1-211ENST00000533492 NFE4Q86UQ8 179 aa10.53□□□□□ -0.72
CPSF1-211ENST00000533492 NHLRC2Q8NBF2 726 aa10.53□□□□□ -0.72
CPSF1-211ENST00000533492 K7EP13 123 aa10.52□□□□□ -0.73
CPSF1-211ENST00000533492 GATA1P15976 413 aaPredicted RBP10.52□□□□□ -0.73
CPSF1-211ENST00000533492 PPT1P50897 306 aa10.52□□□□□ -0.73
CPSF1-211ENST00000533492 KRTAP10-2P60368 255 aa10.52□□□□□ -0.73
CPSF1-211ENST00000533492 UBE2G2P60604 165 aa10.52□□□□□ -0.73
CPSF1-211ENST00000533492 RGS21Q2M5E4 152 aa10.52□□□□□ -0.73
CPSF1-211ENST00000533492 Q6ZRN7 208 aaPredicted RBP10.52□□□□□ -0.73
CPSF1-211ENST00000533492 WFDC10BQ8IUB3 73 aa10.52□□□□□ -0.73
CPSF1-211ENST00000533492 C11orf21Q9P2W6 132 aa10.52□□□□□ -0.73
CPSF1-211ENST00000533492 TNFRSF18Q9Y5U5 241 aa10.52□□□□□ -0.73
CPSF1-211ENST00000533492 TRAV34A0A0B4J273 112 aa10.51□□□□□ -0.73
CPSF1-211ENST00000533492 LOC100131303A0A0U1RQF7 123 aa10.51□□□□□ -0.73
CPSF1-211ENST00000533492 CIDEAO60543 219 aa10.51□□□□□ -0.73
CPSF1-211ENST00000533492 ZNF726P1Q15940 193 aa10.51□□□□□ -0.73
CPSF1-211ENST00000533492 LINC00479Q96M42 142 aa10.51□□□□□ -0.73
CPSF1-211ENST00000533492 PRADC1Q9BSG0 188 aa10.51□□□□□ -0.73
CPSF1-211ENST00000533492 NKX6-2Q9C056 277 aaPredicted RBP10.51□□□□□ -0.73
CPSF1-211ENST00000533492 ARPC5O15511 151 aa10.5□□□□□ -0.73
CPSF1-211ENST00000533492 RS1O15537 224 aa10.5□□□□□ -0.73
CPSF1-211ENST00000533492 S100A4P26447 101 aaKnown RBP10.5□□□□□ -0.73
CPSF1-211ENST00000533492 FGF8P55075 233 aaPredicted RBP10.5□□□□□ -0.73
CPSF1-211ENST00000533492 ERVFC1-1P60608 527 aa10.5□□□□□ -0.73
CPSF1-211ENST00000533492 CFAP126Q5VTH2 177 aa10.5□□□□□ -0.73
CPSF1-211ENST00000533492 C9orf85Q96MD7 179 aa10.5□□□□□ -0.73
CPSF1-211ENST00000533492 IGHV3-73A0A0B4J1V6 119 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 PGPEP1LA6NFU8 196 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 FABP5P3A8MUU1 101 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 PEX7O00628 323 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 DNAH10OSP0CZ25 163 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 DPPA3Q6W0C5 159 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 C10orf126Q8N4M7 172 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 SLC25A29Q8N8R3 303 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 PGPEP1Q9NXJ5 209 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 MSRB1Q9NZV6 116 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 ARL2-SNX15V9GYD0 113 aa10.49□□□□□ -0.73
CPSF1-211ENST00000533492 PCLOQ9Y6V0 5065 aa10.48□□□□□ -0.73
CPSF1-211ENST00000533492 TRBV6-4A0A1B0GX49 114 aa10.48□□□□□ -0.73
CPSF1-211ENST00000533492 CRYGDP07320 174 aa10.48□□□□□ -0.73
CPSF1-211ENST00000533492 RHOHQ15669 191 aa10.48□□□□□ -0.73
CPSF1-211ENST00000533492 ZNF506Q5JVG8 444 aa10.48□□□□□ -0.73
CPSF1-211ENST00000533492 HIST1H2BAQ96A08 127 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms