RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 HIGD1CA8MV81 97 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 G3V4G9 280 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 MUC21Q5SSG8 566 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 SAMD5Q5TGI4 173 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 KCNIP4Q6PIL6 250 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 PYGO2Q9BRQ0 406 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 GFRA4Q9GZZ7 299 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 TRBV24-1A0A075B6N3 115 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 FAM231BA6NCW3 169 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 RPL35AP18077 110 aaKnown RBP11.68□□□□□ -0.54
TRIM3-213ENST00000533309 ANXA2RQ3ZCQ2 193 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 NUP35Q8NFH5 326 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 SRD5A3Q9H8P0 318 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 NAGKQ9UJ70 344 aa11.68□□□□□ -0.54
TRIM3-213ENST00000533309 DNHD1Q96M86 4753 aa11.67□□□□□ -0.54
TRIM3-213ENST00000533309 GRIFINA4D1Z8 144 aa11.67□□□□□ -0.54
TRIM3-213ENST00000533309 FOXA3P55318 350 aaPredicted RBP11.67□□□□□ -0.54
TRIM3-213ENST00000533309 RPS20P60866 119 aaKnown RBP11.67□□□□□ -0.54
TRIM3-213ENST00000533309 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.67□□□□□ -0.54
TRIM3-213ENST00000533309 XCL2Q9UBD3 114 aa11.67□□□□□ -0.54
TRIM3-213ENST00000533309 NAT8BQ9UHF3 227 aa11.67□□□□□ -0.54
TRIM3-213ENST00000533309 TRAV9-1A0A075B6T8 112 aa11.66□□□□□ -0.54
TRIM3-213ENST00000533309 XKRY2A2RUG3 117 aa11.66□□□□□ -0.54
TRIM3-213ENST00000533309 AMBPP02760 352 aa11.66□□□□□ -0.54
TRIM3-213ENST00000533309 IGLC6P0CF74 106 aa11.66□□□□□ -0.54
TRIM3-213ENST00000533309 NUTF2P61970 127 aaKnown RBP11.66□□□□□ -0.54
TRIM3-213ENST00000533309 TDRG1Q3Y452 100 aa11.66□□□□□ -0.54
TRIM3-213ENST00000533309 INSP01308 110 aa11.65□□□□□ -0.54
TRIM3-213ENST00000533309 MORN3Q6PF18 240 aaPredicted RBP11.64□□□□□ -0.55
TRIM3-213ENST00000533309 PGLYRP4Q96LB8 373 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 C20orf144Q9BQM9 153 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 MUC4Q99102 2169 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 IGHV1OR15-1A0A075B7D0 117 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 SPINK4O60575 86 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 TYMSP04818 313 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 FRMD6-AS1P0C7T7 363 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 CTRLP40313 264 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 KRTAP21-3Q3LHN1 58 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 FAM159AQ6UWV7 190 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 C1orf158Q8N1D5 194 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 FER1L6-AS1Q8NA97 138 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 BTF3L4Q96K17 158 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 FAM210BQ96KR6 192 aa11.64□□□□□ -0.55
TRIM3-213ENST00000533309 GNRH2O43555 120 aa11.63□□□□□ -0.55
TRIM3-213ENST00000533309 DNLZQ5SXM8 178 aa11.63□□□□□ -0.55
TRIM3-213ENST00000533309 LYZL1Q6UWQ5 148 aa11.63□□□□□ -0.55
TRIM3-213ENST00000533309 CSNK1G2-AS1Q8NCQ2 148 aa11.63□□□□□ -0.55
TRIM3-213ENST00000533309 KCNS1Q96KK3 526 aa11.63□□□□□ -0.55
TRIM3-213ENST00000533309 TP53TG3Q9ULZ0 132 aa11.63□□□□□ -0.55
TRIM3-213ENST00000533309 NBEAL2Q6ZNJ1 2754 aa11.63□□□□□ -0.55
TRIM3-213ENST00000533309 RAB5AP20339 215 aa11.62□□□□□ -0.55
TRIM3-213ENST00000533309 MRPL54Q6P161 138 aaKnown RBP11.62□□□□□ -0.55
TRIM3-213ENST00000533309 TPPP3Q9BW30 176 aa11.62□□□□□ -0.55
TRIM3-213ENST00000533309 ZMAT5Q9UDW3 170 aaKnown RBP11.62□□□□□ -0.55
TRIM3-213ENST00000533309 A0A1B0GXF2 115 aa11.61□□□□□ -0.55
TRIM3-213ENST00000533309 ARMS2P0C7Q2 107 aa11.61□□□□□ -0.55
TRIM3-213ENST00000533309 IGHV4-30-4P0DP06 118 aa11.61□□□□□ -0.55
TRIM3-213ENST00000533309 RNASE3P12724 160 aaKnown RBP11.61□□□□□ -0.55
TRIM3-213ENST00000533309 SSBP4Q9BWG4 385 aaPredicted RBP11.61□□□□□ -0.55
TRIM3-213ENST00000533309 LOC102724200A0A096LPH7 203 aaPredicted RBP11.6□□□□□ -0.55
TRIM3-213ENST00000533309 H3BVH4 76 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 SNAI2O43623 268 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 PRM2P04554 102 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 OR5AL1P0C617 328 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 ASIPP42127 132 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 LINC00467Q9BRT7 94 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 C1QTNF4Q9BXJ3 329 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 CNFNQ9BYD5 112 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 CSTL1Q9H114 145 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 IGHV3-16A0A0C4DH30 117 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 MUC21A0A0G2JKD1 596 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 MUC21A0A140T8X8 626 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 A0A1B0GUT8 65 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 TMEM256Q8N2U0 113 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 SCRT2Q9NQ03 307 aa11.6□□□□□ -0.55
TRIM3-213ENST00000533309 MED14OSP0DP75 135 aa11.59□□□□□ -0.55
TRIM3-213ENST00000533309 ATP5L2Q7Z4Y8 100 aa11.59□□□□□ -0.55
TRIM3-213ENST00000533309 OR10AG1Q8NH19 301 aa11.59□□□□□ -0.55
TRIM3-213ENST00000533309 LINC01587Q99440 93 aa11.59□□□□□ -0.55
TRIM3-213ENST00000533309 KIR2DL5BA0A0G2JN68 375 aa11.58□□□□□ -0.56
TRIM3-213ENST00000533309 KIR2DL5BA0A0G2JPC4 375 aa11.58□□□□□ -0.56
TRIM3-213ENST00000533309 F2Z2F3 143 aa11.58□□□□□ -0.56
TRIM3-213ENST00000533309 KPRPQ5T749 579 aaPredicted RBP11.58□□□□□ -0.56
TRIM3-213ENST00000533309 KIR2DL5AQ8N109 375 aa11.58□□□□□ -0.56
TRIM3-213ENST00000533309 KIR2DL5BQ8NHK3 375 aa11.58□□□□□ -0.56
TRIM3-213ENST00000533309 MDFICQ9P1T7 246 aa11.58□□□□□ -0.56
TRIM3-213ENST00000533309 IGHV3OR16-12A0A075B7B8 117 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 CBY3A6NI87 242 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 SPRY2O43597 315 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 HTN1P15515 57 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 S100A4P26447 101 aaKnown RBP11.57□□□□□ -0.56
TRIM3-213ENST00000533309 ZNF705AQ6ZN79 300 aaPredicted RBP11.57□□□□□ -0.56
TRIM3-213ENST00000533309 C9orf85Q96MD7 179 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 TMEM208Q9BTX3 173 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 TRGV11A0A075B6L2 103 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 A8MZ25 164 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 RPS10P46783 165 aaKnown RBP11.57□□□□□ -0.56
TRIM3-213ENST00000533309 HBBP68871 147 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 RASL11AQ6T310 242 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 MSRB1Q9NZV6 116 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms