RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	TRAV1-1	A0A0B4J248	108 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	TRBV7-9	A0A0J9YWB2	115 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	TMEM189	A5PLL7	270 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	TEX46	H3BTG2	121 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678		H7BYZ3	331 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	PRM2	P04554	102 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	GPX1	P07203	203 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	NMB	P08949	121 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	HTN1	P15515	57 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	EMP1	P54849	157 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	TAS2R60	P59551	318 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678		Q86TA4	180 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	TMEM75	Q8N9X5	138 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	C11orf45	Q8TAV5	145 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	NDFIP1	Q9BT67	221 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	NKX6-2	Q9C056	277 aa	Predicted RBP	5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	MANBAL	Q9NQG1	85 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	GNG13	Q9P2W3	67 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	CELA1	Q9UNI1	258 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	PSG8	Q9UQ74	426 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	LENEP	Q9Y5L5	61 aa		5.75	□□□□□ -1.49
PUM1-223	ENST00000532678	TRAV34	A0A0B4J273	112 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	C11orf94	C9JXX5	98 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	IFNA1	P01562	189 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	IGLV2-11	P01706	119 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	AZU1	P20160	251 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	GCSH	P23434	173 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	AKR1C3	P42330	323 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	CCL20	P78556	96 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	FLI1	Q01543	452 aa	Predicted RBP	5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	PRNT	Q86SH4	94 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	CCDC28A	Q8IWP9	274 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	HIST1H2BA	Q96A08	127 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	TVP23C	Q96ET8	276 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	C16orf74	Q96GX8	76 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	LINC00479	Q96M42	142 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	PYGO2	Q9BRQ0	406 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	TCEAL7	Q9BRU2	100 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	TREM1	Q9NP99	234 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	DNAH2	Q9P225	4427 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	DNAH17	Q9UFH2	4485 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	DYNC1H1	Q14204	4646 aa	Known RBP	5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	FAT2	Q9NYQ8	4349 aa		5.74	□□□□□ -1.49
PUM1-223	ENST00000532678	KIAA1109	Q2LD37	5005 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	PLAC8L1	A1L4L8	177 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	FBLL1	A6NHQ2	334 aa	Known RBP	5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	CBY3	A6NI87	242 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	ZNF324	O75467	553 aa	Predicted RBP	5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	BCL2	P10415	239 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	UBE2G1	P62253	170 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	BLOC1S1	P78537	153 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	FAM222A	Q5U5X8	452 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678		Q6AWC8	147 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	LGALS9C	Q6DKI2	356 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678		Q6ZQT7	251 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	ZNF767P	Q75MW2	155 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	RNASE8	Q8TDE3	154 aa	Known RBP	5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	TMEM263	Q8WUH6	116 aa	Known RBP	5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	FMC1	Q96HJ9	113 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	NAGK	Q9UJ70	344 aa		5.73	□□□□□ -1.49
PUM1-223	ENST00000532678	TEX48	A0A1B0GUV7	120 aa		5.72	□□□□□ -1.49
PUM1-223	ENST00000532678	IGLL5	B9A064	214 aa		5.72	□□□□□ -1.49
PUM1-223	ENST00000532678	SPART-AS1	P0CW21	52 aa		5.72	□□□□□ -1.49
PUM1-223	ENST00000532678	MUC21	Q5SSG8	566 aa		5.72	□□□□□ -1.49
PUM1-223	ENST00000532678		Q6ZTC4	211 aa		5.72	□□□□□ -1.49
PUM1-223	ENST00000532678	EIF4E3	Q8N5X7	224 aa	Known RBP	5.72	□□□□□ -1.49
PUM1-223	ENST00000532678	LINC00467	Q9BRT7	94 aa		5.72	□□□□□ -1.49
PUM1-223	ENST00000532678	APLN	Q9ULZ1	77 aa		5.72	□□□□□ -1.49
PUM1-223	ENST00000532678	DNAH11	Q96DT5	4516 aa		5.72	□□□□□ -1.49
PUM1-223	ENST00000532678	IGHV1OR15-1	A0A075B7D0	117 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	TRAV21	A0A0B4J279	112 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	GCG	P01275	180 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	ZNF80	P51504	273 aa	Predicted RBP	5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	PTTG1IP	P53801	180 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	MEF2B	Q02080	365 aa	Predicted RBP	5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	TMEM183B	Q1AE95	376 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	C12orf74	Q32Q52	190 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	ANXA2R	Q3ZCQ2	193 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	SMUG1	Q53HV7	270 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	SAPCD1	Q5SSQ6	148 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	TEX261	Q6UWH6	196 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	FAM159A	Q6UWV7	190 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	ZNF493	Q6ZR52	646 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	C11orf72	Q8NBR9	251 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	ZNF680	Q8NEM1	530 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	C2CD4C	Q8TF44	421 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	C11orf52	Q96A22	123 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	TP53TG3	Q9ULZ0	132 aa		5.71	□□□□□ -1.5
PUM1-223	ENST00000532678	TRGV11	A0A075B6L2	103 aa		5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	TRBV6-1	A0A0K0K1D8	114 aa		5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	LYRM9	A8MSI8	78 aa		5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	SNURFL	B1AK76	121 aa		5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	LTA	P01374	205 aa		5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	PFN1	P07737	140 aa	Known RBP	5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	TAGLN2	P37802	199 aa	Known RBP	5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	DAD1	P61803	113 aa		5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	NHLRC2	Q8NBF2	726 aa		5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	LYPD6B	Q8NI32	183 aa		5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	PCNP	Q8WW12	178 aa	Known RBP	5.7	□□□□□ -1.5
PUM1-223	ENST00000532678	ZC2HC1A	Q96GY0	325 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 89 ms