RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 COL24A1Q17RW2 1714 aa2.14□□□□□ -2.07
AC055878.1-201ENST00000531858 SHROOM3Q8TF72 1996 aa2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 SCN8AQ9UQD0 1980 aa2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 H3BRM9 83 aa2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 GYPBP06028 91 aa2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 PIRTP0C851 137 aa2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 POLR2JP52435 117 aaKnown RBP2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 CATR1Q13166 79 aa2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 COA5Q86WW8 74 aa2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 AQP10Q96PS8 301 aa2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 KLK9Q9UKQ9 250 aa2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 PRRC2AP48634 2157 aaKnown RBP2.13□□□□□ -2.07
AC055878.1-201ENST00000531858 FOCADQ5VW36 1801 aa2.12□□□□□ -2.07
AC055878.1-201ENST00000531858 TRBV6-4A0A1B0GX49 114 aa2.12□□□□□ -2.07
AC055878.1-201ENST00000531858 IFITM1P13164 125 aa2.12□□□□□ -2.07
AC055878.1-201ENST00000531858 KRTAP13-3Q3SY46 172 aa2.12□□□□□ -2.07
AC055878.1-201ENST00000531858 C9orf153Q5TBE3 101 aa2.12□□□□□ -2.07
AC055878.1-201ENST00000531858 SVBPQ8N300 66 aa2.12□□□□□ -2.07
AC055878.1-201ENST00000531858 TMEM141Q96I45 108 aa2.12□□□□□ -2.07
AC055878.1-201ENST00000531858 MED9Q9NWA0 146 aa2.12□□□□□ -2.07
AC055878.1-201ENST00000531858 POLEQ07864 2286 aa2.12□□□□□ -2.07
AC055878.1-201ENST00000531858 GPR179Q6PRD1 2367 aa2.12□□□□□ -2.07
AC055878.1-201ENST00000531858 IGLV3-32A0A0A0MS00 114 aa2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 PVALEFA0A1B0GWK0 134 aa2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 MRPS14O60783 128 aaKnown RBP2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 SNCGO76070 127 aa2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 GNG2P59768 71 aa2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 TSKUQ8WUA8 353 aa2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 LSM10Q969L4 123 aaKnown RBP2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 TMEM106BQ9NUM4 274 aa2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 CECR2Q9BXF3 1484 aa2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 QRICH2Q9H0J4 1663 aa2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 MYO5AQ9Y4I1 1855 aaKnown RBP2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 MYLKQ15746 1914 aa2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 CUL9Q8IWT3 2517 aa2.11□□□□□ -2.07
AC055878.1-201ENST00000531858 CCDC88AQ3V6T2 1871 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 TRBV6-5A0A0K0K1A5 114 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 TMEM30CPA0ZSE6 113 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 M0R2N4 97 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 IGHV3-30P01768 117 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 IGHV3-30-5P0DP03 117 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 NPC2P61916 151 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 TTC9CQ8N5M4 171 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 NDUFA12Q9UI09 145 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 PRO0461Q9UI25 63 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 C22orf24Q9Y442 160 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 NRKQ7Z2Y5 1582 aa2.1□□□□□ -2.07
AC055878.1-201ENST00000531858 PLXNA3P51805 1871 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 LAMB4A4D0S4 1761 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 CXorf51AA0A1B0GTR3 108 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 TCRBV3S1A0A5B6 114 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 INE1O15225 51 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 IGKV4-1P06312 121 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 SPINK8P0C7L1 97 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 CBLN1P23435 193 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 KRTAP12-2P59991 146 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 MPV17LQ2QL34 196 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 UNQ5815/PRO19632Q6UWF5 114 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 DMAC1Q96GE9 116 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 ARHGAP32A7KAX9 2087 aa2.09□□□□□ -2.07
AC055878.1-201ENST00000531858 ADGRB2O60241 1585 aa2.09□□□□□ -2.08
AC055878.1-201ENST00000531858 CACNA1DQ01668 2161 aa2.09□□□□□ -2.08
AC055878.1-201ENST00000531858 PTPRBP23467 1997 aa2.09□□□□□ -2.08
AC055878.1-201ENST00000531858 KIDINS220Q9ULH0 1771 aa2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 TRBV10-1A0A0K0K1A3 114 aa2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 FAM24AA6NFZ4 105 aa2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 TMEM262E9PQX1 116 aa2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 H3BQ15 152 aa2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 J3QRE1 110 aa2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 ATP5EP56381 51 aaPredicted RBP2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 SLC48A1Q6P1K1 146 aa2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 Q6ZRN7 208 aaPredicted RBP2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 C4orf33Q8N1A6 199 aa2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 LAMB2P55268 1798 aa2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 TROQ12816 1431 aaPredicted RBP2.08□□□□□ -2.08
AC055878.1-201ENST00000531858 IFT140Q96RY7 1462 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 MGAMO43451 1857 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 ANAPC1Q9H1A4 1944 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 HEATR5AQ86XA9 2040 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 A6NIN4 97 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 C9orf116Q5BN46 136 aaPredicted RBP2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 COL5A1-AS1Q5SY13 56 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 LYPD5Q6UWN5 251 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 Q8N8P6 123 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 REG4Q9BYZ8 158 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 ATG5Q9H1Y0 275 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 CDC42SE1Q9NRR8 79 aa2.07□□□□□ -2.08
AC055878.1-201ENST00000531858 TTC37Q6PGP7 1564 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 CUL7Q14999 1698 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 LOC110117498A0A087WWA1 95 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 TRAV17A0A0B4J275 112 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 NUPR2A6NF83 97 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 OOSP1A8MZH6 123 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 SLC25A6P12236 298 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 IQCJQ1A5X6 159 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 RPL7L1Q6DKI1 246 aaKnown RBP2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 C5orf38Q86SI9 138 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 CYSTM1Q9H1C7 97 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms