RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 TRAV12-2A0A075B6T6 113 aa12.09□□□□□ -0.47
PKP3-208ENST00000531857 TRAV8-2A0A0B4J237 113 aa12.09□□□□□ -0.47
PKP3-208ENST00000531857 ZNF98A6NK75 572 aa12.09□□□□□ -0.47
PKP3-208ENST00000531857 C1orf196B1AJZ1 125 aa12.09□□□□□ -0.47
PKP3-208ENST00000531857 H7BYZ3 331 aa12.09□□□□□ -0.47
PKP3-208ENST00000531857 NBEAP1P0C6P0 100 aa12.09□□□□□ -0.47
PKP3-208ENST00000531857 HIST1H1EP10412 219 aaKnown RBP12.09□□□□□ -0.47
PKP3-208ENST00000531857 KCNIP4Q6PIL6 250 aa12.09□□□□□ -0.47
PKP3-208ENST00000531857 SPATA12Q7Z6I5 190 aa12.09□□□□□ -0.47
PKP3-208ENST00000531857 SHANK2-AS3Q9BTD1 123 aa12.09□□□□□ -0.47
PKP3-208ENST00000531857 SCRT2Q9NQ03 307 aa12.09□□□□□ -0.47
PKP3-208ENST00000531857 TRBV24-1A0A075B6N3 115 aa12.08□□□□□ -0.48
PKP3-208ENST00000531857 TRAV9-1A0A075B6T8 112 aa12.08□□□□□ -0.48
PKP3-208ENST00000531857 RAB5AP20339 215 aa12.08□□□□□ -0.48
PKP3-208ENST00000531857 TSPOP30536 169 aa12.08□□□□□ -0.48
PKP3-208ENST00000531857 CCL18P55774 89 aa12.08□□□□□ -0.48
PKP3-208ENST00000531857 PDE6HQ13956 83 aa12.08□□□□□ -0.48
PKP3-208ENST00000531857 LINC01551Q86U37 167 aa12.08□□□□□ -0.48
PKP3-208ENST00000531857 FXYD5Q96DB9 178 aa12.08□□□□□ -0.48
PKP3-208ENST00000531857 GPR82Q96P67 336 aa12.08□□□□□ -0.48
PKP3-208ENST00000531857 SLC25A39Q9BZJ4 359 aaPredicted RBP12.08□□□□□ -0.48
PKP3-208ENST00000531857 EIF3GO75821 320 aaKnown RBP eCLIP12.07□□□□□ -0.48
PKP3-208ENST00000531857 DUSP14O95147 198 aaKnown RBP12.07□□□□□ -0.48
PKP3-208ENST00000531857 APOBP04114 4563 aaKnown RBP12.07□□□□□ -0.48
PKP3-208ENST00000531857 ATP5G1P05496 136 aa12.07□□□□□ -0.48
PKP3-208ENST00000531857 SUMO1P63165 101 aaKnown RBP12.07□□□□□ -0.48
PKP3-208ENST00000531857 SCO2A0A1W2PP80 73 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 FBLL1A6NHQ2 334 aaKnown RBP12.06□□□□□ -0.48
PKP3-208ENST00000531857 CBY3A6NI87 242 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 H3BRN7 92 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 AKR1C3P42330 323 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 GNG4P50150 75 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 ELOBQ15370 118 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 C5orf17Q8NAS9 161 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 ISOC2Q96AB3 205 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 YPEL4Q96NS1 127 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 KRTAP1-5Q9BYS1 174 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 OTORQ9NRC9 128 aa12.06□□□□□ -0.48
PKP3-208ENST00000531857 SERTM2A0A1B0GWG4 89 aa12.05□□□□□ -0.48
PKP3-208ENST00000531857 OR10J4P0C629 311 aa12.05□□□□□ -0.48
PKP3-208ENST00000531857 PRB4P10163 310 aaPredicted RBP12.05□□□□□ -0.48
PKP3-208ENST00000531857 RPL7P18124 248 aaKnown RBP12.05□□□□□ -0.48
PKP3-208ENST00000531857 RPL35P42766 123 aaKnown RBP12.05□□□□□ -0.48
PKP3-208ENST00000531857 Q9H8V8 135 aa12.05□□□□□ -0.48
PKP3-208ENST00000531857 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
PKP3-208ENST00000531857 K7EQM0 130 aa12.04□□□□□ -0.48
PKP3-208ENST00000531857 HTN1P15515 57 aa12.04□□□□□ -0.48
PKP3-208ENST00000531857 KRTAP10-2P60368 255 aa12.04□□□□□ -0.48
PKP3-208ENST00000531857 ZNF738Q8NE65 137 aa12.04□□□□□ -0.48
PKP3-208ENST00000531857 SFRP2Q96HF1 295 aa12.04□□□□□ -0.48
PKP3-208ENST00000531857 LINC01587Q99440 93 aa12.04□□□□□ -0.48
PKP3-208ENST00000531857 PYGO2Q9BRQ0 406 aa12.04□□□□□ -0.48
PKP3-208ENST00000531857 TRBV6-1A0A0K0K1D8 114 aa12.03□□□□□ -0.48
PKP3-208ENST00000531857 GGTLC3B5MD39 225 aa12.03□□□□□ -0.48
PKP3-208ENST00000531857 PEX7O00628 323 aa12.03□□□□□ -0.48
PKP3-208ENST00000531857 ZNF253O75346 499 aa12.03□□□□□ -0.48
PKP3-208ENST00000531857 OR10G8Q8NGN5 311 aa12.03□□□□□ -0.48
PKP3-208ENST00000531857 OSTCQ9NRP0 149 aa12.03□□□□□ -0.48
PKP3-208ENST00000531857 EPDR1Q9UM22 224 aa12.03□□□□□ -0.48
PKP3-208ENST00000531857 KLF12Q9Y4X4 402 aa12.03□□□□□ -0.48
PKP3-208ENST00000531857 PFN1P07737 140 aaKnown RBP12.02□□□□□ -0.49
PKP3-208ENST00000531857 PYYP10082 97 aa12.02□□□□□ -0.49
PKP3-208ENST00000531857 HIST1H1AQ02539 215 aaPredicted RBP12.02□□□□□ -0.49
PKP3-208ENST00000531857 TMEM183BQ1AE95 376 aa12.02□□□□□ -0.49
PKP3-208ENST00000531857 COX19Q49B96 90 aa12.02□□□□□ -0.49
PKP3-208ENST00000531857 MORN5Q5VZ52 161 aa12.02□□□□□ -0.49
PKP3-208ENST00000531857 CMTM2Q8TAZ6 248 aa12.02□□□□□ -0.49
PKP3-208ENST00000531857 FMC1Q96HJ9 113 aa12.02□□□□□ -0.49
PKP3-208ENST00000531857 PGPA6NDG6 321 aa12.01□□□□□ -0.49
PKP3-208ENST00000531857 GCGP01275 180 aa12.01□□□□□ -0.49
PKP3-208ENST00000531857 SLC25A5P05141 298 aaKnown RBP12.01□□□□□ -0.49
PKP3-208ENST00000531857 UBE2G1P62253 170 aa12.01□□□□□ -0.49
PKP3-208ENST00000531857 TMEM256Q8N2U0 113 aa12.01□□□□□ -0.49
PKP3-208ENST00000531857 OR8A1Q8NGG7 326 aa12.01□□□□□ -0.49
PKP3-208ENST00000531857 OCC1Q8TAD7 63 aa12.01□□□□□ -0.49
PKP3-208ENST00000531857 C16orf74Q96GX8 76 aa12.01□□□□□ -0.49
PKP3-208ENST00000531857 NOP10Q9NPE3 64 aaKnown RBP12.01□□□□□ -0.49
PKP3-208ENST00000531857 TIMM8BQ9Y5J9 83 aaPredicted RBP12.01□□□□□ -0.49
PKP3-208ENST00000531857 TRBV19A0A075B6N1 114 aa12□□□□□ -0.49
PKP3-208ENST00000531857 LOC105371267A0A1B0GV96 52 aa12□□□□□ -0.49
PKP3-208ENST00000531857 TYMSP04818 313 aa12□□□□□ -0.49
PKP3-208ENST00000531857 RANP62826 216 aaKnown RBP12□□□□□ -0.49
PKP3-208ENST00000531857 CENPWQ5EE01 88 aa12□□□□□ -0.49
PKP3-208ENST00000531857 FAM231DQ6ZW35 169 aa12□□□□□ -0.49
PKP3-208ENST00000531857 Q9H3A6 140 aa12□□□□□ -0.49
PKP3-208ENST00000531857 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
PKP3-208ENST00000531857 DNAH5Q8TE73 4624 aa11.99□□□□□ -0.49
PKP3-208ENST00000531857 TRAV26-1A0A087WT03 109 aa11.99□□□□□ -0.49
PKP3-208ENST00000531857 S100A6P06703 90 aa11.99□□□□□ -0.49
PKP3-208ENST00000531857 IGLC2P0DOY2 106 aa11.99□□□□□ -0.49
PKP3-208ENST00000531857 RPS10P46783 165 aaKnown RBP11.99□□□□□ -0.49
PKP3-208ENST00000531857 CSN1S1P47710 185 aa11.99□□□□□ -0.49
PKP3-208ENST00000531857 OR5I1Q13606 314 aa11.99□□□□□ -0.49
PKP3-208ENST00000531857 RNASE8Q8TDE3 154 aaKnown RBP11.99□□□□□ -0.49
PKP3-208ENST00000531857 DERL1Q9BUN8 251 aa11.99□□□□□ -0.49
PKP3-208ENST00000531857 PPP1R14DQ9NXH3 145 aa11.99□□□□□ -0.49
PKP3-208ENST00000531857 TRBV20OR9-2A0A075B6H5 130 aa11.98□□□□□ -0.49
PKP3-208ENST00000531857 A0A0J9YY99 117 aa11.98□□□□□ -0.49
PKP3-208ENST00000531857 HOXA5P20719 270 aa11.98□□□□□ -0.49
PKP3-208ENST00000531857 KIR3DS1Q14943 382 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms