RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 SCO2A0A1W2PP80 73 aa13.29□□□□□ -0.28
UBXN1-212ENST00000531625 CBY3A6NI87 242 aa13.29□□□□□ -0.28
UBXN1-212ENST00000531625 GPX1P07203 203 aa13.29□□□□□ -0.28
UBXN1-212ENST00000531625 CRISP2P16562 243 aa13.29□□□□□ -0.28
UBXN1-212ENST00000531625 PRNTQ86SH4 94 aa13.29□□□□□ -0.28
UBXN1-212ENST00000531625 TMEM75Q8N9X5 138 aa13.29□□□□□ -0.28
UBXN1-212ENST00000531625 LYPD6BQ8NI32 183 aa13.29□□□□□ -0.28
UBXN1-212ENST00000531625 LENEPQ9Y5L5 61 aa13.29□□□□□ -0.28
UBXN1-212ENST00000531625 TRAV12-3A0A0B4J271 114 aa13.28□□□□□ -0.28
UBXN1-212ENST00000531625 TRBV7-9A0A0J9YWB2 115 aa13.28□□□□□ -0.28
UBXN1-212ENST00000531625 C7orf71A4D174 169 aa13.28□□□□□ -0.28
UBXN1-212ENST00000531625 AZU1P20160 251 aa13.28□□□□□ -0.28
UBXN1-212ENST00000531625 RNASE4P34096 147 aaKnown RBP13.28□□□□□ -0.28
UBXN1-212ENST00000531625 AKR1C3P42330 323 aa13.28□□□□□ -0.28
UBXN1-212ENST00000531625 FLI1Q01543 452 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-212ENST00000531625 BTN1A1Q13410 526 aa13.28□□□□□ -0.28
UBXN1-212ENST00000531625 ZFAND2AQ8N6M9 145 aa13.28□□□□□ -0.28
UBXN1-212ENST00000531625 NDFIP1Q9BT67 221 aa13.28□□□□□ -0.28
UBXN1-212ENST00000531625 FBLL1A6NHQ2 334 aaKnown RBP13.27□□□□□ -0.29
UBXN1-212ENST00000531625 KLLNB2CW77 178 aa13.27□□□□□ -0.29
UBXN1-212ENST00000531625 IGLV2-11P01706 119 aa13.27□□□□□ -0.29
UBXN1-212ENST00000531625 NMBP08949 121 aa13.27□□□□□ -0.29
UBXN1-212ENST00000531625 TAGLN2P37802 199 aaKnown RBP13.27□□□□□ -0.29
UBXN1-212ENST00000531625 MEF2BQ02080 365 aaPredicted RBP13.27□□□□□ -0.29
UBXN1-212ENST00000531625 PRR9Q5T870 116 aa13.27□□□□□ -0.29
UBXN1-212ENST00000531625 SPATA12Q7Z6I5 190 aa13.27□□□□□ -0.29
UBXN1-212ENST00000531625 LINC01587Q99440 93 aa13.27□□□□□ -0.29
UBXN1-212ENST00000531625 TXNDC17Q9BRA2 123 aa13.27□□□□□ -0.29
UBXN1-212ENST00000531625 TREM1Q9NP99 234 aa13.27□□□□□ -0.29
UBXN1-212ENST00000531625 SCRT2Q9NQ03 307 aa13.27□□□□□ -0.29
UBXN1-212ENST00000531625 VAX2Q9UIW0 290 aa13.27□□□□□ -0.29
UBXN1-212ENST00000531625 UBE2G1P62253 170 aa13.26□□□□□ -0.29
UBXN1-212ENST00000531625 TMEM256Q8N2U0 113 aa13.26□□□□□ -0.29
UBXN1-212ENST00000531625 TVP23CQ96ET8 276 aa13.26□□□□□ -0.29
UBXN1-212ENST00000531625 C20orf144Q9BQM9 153 aa13.26□□□□□ -0.29
UBXN1-212ENST00000531625 RBFOX3A6NFN3 312 aa13.25□□□□□ -0.29
UBXN1-212ENST00000531625 TAS2R60P59551 318 aa13.25□□□□□ -0.29
UBXN1-212ENST00000531625 Q86TA4 180 aa13.25□□□□□ -0.29
UBXN1-212ENST00000531625 FMC1Q96HJ9 113 aa13.25□□□□□ -0.29
UBXN1-212ENST00000531625 Q9H8V8 135 aa13.25□□□□□ -0.29
UBXN1-212ENST00000531625 DMBT1Q9UGM3 2413 aaPredicted RBP13.25□□□□□ -0.29
UBXN1-212ENST00000531625 H7BYZ3 331 aa13.24□□□□□ -0.29
UBXN1-212ENST00000531625 PDE6DO43924 150 aa13.24□□□□□ -0.29
UBXN1-212ENST00000531625 HTN1P15515 57 aa13.24□□□□□ -0.29
UBXN1-212ENST00000531625 RAB14P61106 215 aa13.24□□□□□ -0.29
UBXN1-212ENST00000531625 TTC32Q5I0X7 151 aa13.24□□□□□ -0.29
UBXN1-212ENST00000531625 TOR2AQ5JU69 321 aa13.24□□□□□ -0.29
UBXN1-212ENST00000531625 C16orf74Q96GX8 76 aa13.24□□□□□ -0.29
UBXN1-212ENST00000531625 TIMM8BQ9Y5J9 83 aaPredicted RBP13.24□□□□□ -0.29
UBXN1-212ENST00000531625 BTF3P20290 206 aaKnown RBP13.23□□□□□ -0.29
UBXN1-212ENST00000531625 TMEM183BQ1AE95 376 aa13.23□□□□□ -0.29
UBXN1-212ENST00000531625 SAPCD1Q5SSQ6 148 aa13.23□□□□□ -0.29
UBXN1-212ENST00000531625 C11orf52Q96A22 123 aa13.23□□□□□ -0.29
UBXN1-212ENST00000531625 C8orf49Q96NF6 230 aa13.23□□□□□ -0.29
UBXN1-212ENST00000531625 KLF12Q9Y4X4 402 aa13.23□□□□□ -0.29
UBXN1-212ENST00000531625 ZNF324O75467 553 aaPredicted RBP13.22□□□□□ -0.29
UBXN1-212ENST00000531625 S100A9P06702 114 aaKnown RBP13.22□□□□□ -0.29
UBXN1-212ENST00000531625 IFITM2Q01629 132 aa13.22□□□□□ -0.29
UBXN1-212ENST00000531625 ZNF506Q5JVG8 444 aa13.22□□□□□ -0.29
UBXN1-212ENST00000531625 ZNF493Q6ZR52 646 aa13.22□□□□□ -0.29
UBXN1-212ENST00000531625 KRTAP1-5Q9BYS1 174 aa13.22□□□□□ -0.29
UBXN1-212ENST00000531625 EIF5A2Q9GZV4 153 aaKnown RBP13.22□□□□□ -0.29
UBXN1-212ENST00000531625 SMUG1Q53HV7 270 aa13.21□□□□□ -0.29
UBXN1-212ENST00000531625 Q6ZQT7 251 aa13.21□□□□□ -0.29
UBXN1-212ENST00000531625 FAM210AQ96ND0 272 aa13.21□□□□□ -0.29
UBXN1-212ENST00000531625 MED9Q9NWA0 146 aa13.21□□□□□ -0.29
UBXN1-212ENST00000531625 ZFP30Q9Y2G7 519 aa13.21□□□□□ -0.29
UBXN1-212ENST00000531625 TRBV6-1A0A0K0K1D8 114 aa13.2□□□□□ -0.3
UBXN1-212ENST00000531625 A0A1W2PPQ1 181 aa13.2□□□□□ -0.3
UBXN1-212ENST00000531625 GCGP01275 180 aa13.2□□□□□ -0.3
UBXN1-212ENST00000531625 LTAP01374 205 aa13.2□□□□□ -0.3
UBXN1-212ENST00000531625 RPL35P42766 123 aaKnown RBP13.2□□□□□ -0.3
UBXN1-212ENST00000531625 KRTAP10-2P60368 255 aa13.2□□□□□ -0.3
UBXN1-212ENST00000531625 Q6AWC8 147 aa13.2□□□□□ -0.3
UBXN1-212ENST00000531625 RNASE8Q8TDE3 154 aaKnown RBP13.2□□□□□ -0.3
UBXN1-212ENST00000531625 PYGO2Q9BRQ0 406 aa13.2□□□□□ -0.3
UBXN1-212ENST00000531625 UPK3BQ9BT76 320 aa13.2□□□□□ -0.3
UBXN1-212ENST00000531625 DERL1Q9BUN8 251 aa13.2□□□□□ -0.3
UBXN1-212ENST00000531625 NOP10Q9NPE3 64 aaKnown RBP13.2□□□□□ -0.3
UBXN1-212ENST00000531625 TRAV21A0A0B4J279 112 aa13.19□□□□□ -0.3
UBXN1-212ENST00000531625 RGS13O14921 159 aa13.19□□□□□ -0.3
UBXN1-212ENST00000531625 BAGE2Q86Y30 109 aa13.19□□□□□ -0.3
UBXN1-212ENST00000531625 TMEM263Q8WUH6 116 aaKnown RBP13.19□□□□□ -0.3
UBXN1-212ENST00000531625 NAGKQ9UJ70 344 aa13.19□□□□□ -0.3
UBXN1-212ENST00000531625 ZNF80P51504 273 aaPredicted RBP13.18□□□□□ -0.3
UBXN1-212ENST00000531625 MUC21Q5SSG8 566 aa13.18□□□□□ -0.3
UBXN1-212ENST00000531625 LINC00612Q8N6U2 182 aa13.18□□□□□ -0.3
UBXN1-212ENST00000531625 NHLRC2Q8NBF2 726 aa13.18□□□□□ -0.3
UBXN1-212ENST00000531625 IGHV1OR15-1A0A075B7D0 117 aa13.17□□□□□ -0.3
UBXN1-212ENST00000531625 TRAV26-1A0A087WT03 109 aa13.17□□□□□ -0.3
UBXN1-212ENST00000531625 CEBPGP53567 150 aa13.17□□□□□ -0.3
UBXN1-212ENST00000531625 OR5I1Q13606 314 aa13.17□□□□□ -0.3
UBXN1-212ENST00000531625 ZC2HC1AQ96GY0 325 aa13.17□□□□□ -0.3
UBXN1-212ENST00000531625 FAT1Q14517 4588 aa13.17□□□□□ -0.3
UBXN1-212ENST00000531625 RAB19A4D1S5 217 aa13.16□□□□□ -0.3
UBXN1-212ENST00000531625 TMEM250H0YL14 139 aa13.16□□□□□ -0.3
UBXN1-212ENST00000531625 H3BNG1 76 aa13.16□□□□□ -0.3
UBXN1-212ENST00000531625 PFN1P07737 140 aaKnown RBP13.16□□□□□ -0.3
UBXN1-212ENST00000531625 CENPWQ5EE01 88 aa13.16□□□□□ -0.3
UBXN1-212ENST00000531625 CLLU1Q5K131 121 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms