RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 RRN3P1Q2M238 152 aa12.78□□□□□ -0.36
CTSB-222ENST00000531551 TP53TG3Q9ULZ0 132 aa12.78□□□□□ -0.36
CTSB-222ENST00000531551 X6R8D5 127 aa12.78□□□□□ -0.36
CTSB-222ENST00000531551 HUWE1Q7Z6Z7 4374 aaKnown RBP12.78□□□□□ -0.36
CTSB-222ENST00000531551 P01737 135 aa12.77□□□□□ -0.37
CTSB-222ENST00000531551 AZU1P20160 251 aa12.77□□□□□ -0.37
CTSB-222ENST00000531551 RPL19P84098 196 aaKnown RBP12.77□□□□□ -0.37
CTSB-222ENST00000531551 IBA57Q5T440 356 aaKnown RBP12.77□□□□□ -0.37
CTSB-222ENST00000531551 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
CTSB-222ENST00000531551 B4DEV8 164 aa12.76□□□□□ -0.37
CTSB-222ENST00000531551 GNRH2O43555 120 aa12.76□□□□□ -0.37
CTSB-222ENST00000531551 NUDT10Q8NFP7 164 aa12.76□□□□□ -0.37
CTSB-222ENST00000531551 NUDT11Q96G61 164 aa12.76□□□□□ -0.37
CTSB-222ENST00000531551 TMEM189A5PLL7 270 aa12.76□□□□□ -0.37
CTSB-222ENST00000531551 C19orf71A6NCJ1 209 aa12.76□□□□□ -0.37
CTSB-222ENST00000531551 ISOC2Q96AB3 205 aa12.76□□□□□ -0.37
CTSB-222ENST00000531551 KCNS1Q96KK3 526 aa12.76□□□□□ -0.37
CTSB-222ENST00000531551 GRIFINA4D1Z8 144 aa12.75□□□□□ -0.37
CTSB-222ENST00000531551 DEFB4AO15263 64 aa12.75□□□□□ -0.37
CTSB-222ENST00000531551 EMP1P54849 157 aa12.75□□□□□ -0.37
CTSB-222ENST00000531551 OR2D3Q8NGH3 330 aa12.75□□□□□ -0.37
CTSB-222ENST00000531551 KRBOX1C9JBD0 128 aa12.74□□□□□ -0.37
CTSB-222ENST00000531551 TYMSP04818 313 aa12.74□□□□□ -0.37
CTSB-222ENST00000531551 PNRC1Q12796 327 aaPredicted RBP12.74□□□□□ -0.37
CTSB-222ENST00000531551 SMIM9A6NGZ8 99 aa12.74□□□□□ -0.37
CTSB-222ENST00000531551 GATCO43716 136 aaKnown RBP12.74□□□□□ -0.37
CTSB-222ENST00000531551 TDRG1Q3Y452 100 aa12.74□□□□□ -0.37
CTSB-222ENST00000531551 LINC01559Q495D7 138 aa12.74□□□□□ -0.37
CTSB-222ENST00000531551 SFRP2Q96HF1 295 aa12.74□□□□□ -0.37
CTSB-222ENST00000531551 NEU1Q99519 415 aa12.74□□□□□ -0.37
CTSB-222ENST00000531551 TIMM8BQ9Y5J9 83 aaPredicted RBP12.74□□□□□ -0.37
CTSB-222ENST00000531551 TRGV11A0A075B6L2 103 aa12.73□□□□□ -0.37
CTSB-222ENST00000531551 IGHV4-28A0A0C4DH34 117 aa12.73□□□□□ -0.37
CTSB-222ENST00000531551 APOC3P02656 99 aa12.73□□□□□ -0.37
CTSB-222ENST00000531551 MIFP14174 115 aa12.73□□□□□ -0.37
CTSB-222ENST00000531551 S100A4P26447 101 aaKnown RBP12.73□□□□□ -0.37
CTSB-222ENST00000531551 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
CTSB-222ENST00000531551 LINC00467Q9BRT7 94 aa12.73□□□□□ -0.37
CTSB-222ENST00000531551 FAM231DQ6ZW35 169 aa12.72□□□□□ -0.37
CTSB-222ENST00000531551 TMEM263Q8WUH6 116 aaKnown RBP12.72□□□□□ -0.37
CTSB-222ENST00000531551 C16orf74Q96GX8 76 aa12.72□□□□□ -0.37
CTSB-222ENST00000531551 RPP21Q9H633 154 aaKnown RBP12.72□□□□□ -0.37
CTSB-222ENST00000531551 MDFICQ9P1T7 246 aa12.72□□□□□ -0.37
CTSB-222ENST00000531551 NHLRC4P0CG21 123 aaPredicted RBP12.72□□□□□ -0.37
CTSB-222ENST00000531551 GZMBP10144 247 aa12.72□□□□□ -0.37
CTSB-222ENST00000531551 C10orf91Q5T1B1 145 aa12.72□□□□□ -0.37
CTSB-222ENST00000531551 OR10G8Q8NGN5 311 aa12.72□□□□□ -0.37
CTSB-222ENST00000531551 GSN-AS1Q9NRJ2 163 aa12.72□□□□□ -0.37
CTSB-222ENST00000531551 CARHSP1Q9Y2V2 147 aaKnown RBP12.72□□□□□ -0.37
CTSB-222ENST00000531551 ASIPP42127 132 aa12.71□□□□□ -0.37
CTSB-222ENST00000531551 Q8NAQ8 132 aa12.71□□□□□ -0.37
CTSB-222ENST00000531551 RNASE8Q8TDE3 154 aaKnown RBP12.71□□□□□ -0.37
CTSB-222ENST00000531551 OSTCQ9NRP0 149 aa12.71□□□□□ -0.37
CTSB-222ENST00000531551 SNURFLB1AK76 121 aa12.7□□□□□ -0.38
CTSB-222ENST00000531551 ZNF415Q09FC8 603 aa12.7□□□□□ -0.38
CTSB-222ENST00000531551 ZNF493Q6ZR52 646 aa12.7□□□□□ -0.38
CTSB-222ENST00000531551 FBN3Q75N90 2809 aa12.7□□□□□ -0.38
CTSB-222ENST00000531551 IGHV3-16A0A0C4DH30 117 aa12.7□□□□□ -0.38
CTSB-222ENST00000531551 TPPP3Q9BW30 176 aa12.7□□□□□ -0.38
CTSB-222ENST00000531551 XKRY2A2RUG3 117 aa12.69□□□□□ -0.38
CTSB-222ENST00000531551 H3BVH4 76 aa12.69□□□□□ -0.38
CTSB-222ENST00000531551 RPS20P60866 119 aaKnown RBP12.69□□□□□ -0.38
CTSB-222ENST00000531551 RNF212Q495C1 297 aa12.69□□□□□ -0.38
CTSB-222ENST00000531551 ZNF575Q86XF7 245 aa12.68□□□□□ -0.38
CTSB-222ENST00000531551 C11orf72Q8NBR9 251 aa12.68□□□□□ -0.38
CTSB-222ENST00000531551 NOP10Q9NPE3 64 aaKnown RBP12.68□□□□□ -0.38
CTSB-222ENST00000531551 A0A0J9YWU9 116 aa12.68□□□□□ -0.38
CTSB-222ENST00000531551 ARMS2P0C7Q2 107 aa12.68□□□□□ -0.38
CTSB-222ENST00000531551 V9GYV3 84 aa12.68□□□□□ -0.38
CTSB-222ENST00000531551 PLAC8L1A1L4L8 177 aa12.67□□□□□ -0.38
CTSB-222ENST00000531551 MT-ND4LP03901 98 aa12.67□□□□□ -0.38
CTSB-222ENST00000531551 RNASE3P12724 160 aaKnown RBP12.67□□□□□ -0.38
CTSB-222ENST00000531551 TCL1AP56279 114 aa12.67□□□□□ -0.38
CTSB-222ENST00000531551 SSTP61278 116 aa12.67□□□□□ -0.38
CTSB-222ENST00000531551 A8MWL6 223 aa12.66□□□□□ -0.38
CTSB-222ENST00000531551 SVBPQ8N300 66 aa12.66□□□□□ -0.38
CTSB-222ENST00000531551 CLRN3Q8NCR9 226 aa12.66□□□□□ -0.38
CTSB-222ENST00000531551 MUC21A0A0G2JKD1 596 aa12.65□□□□□ -0.38
CTSB-222ENST00000531551 MUC21A0A140T8X8 626 aa12.65□□□□□ -0.38
CTSB-222ENST00000531551 PPP1R2P9O14990 202 aa12.65□□□□□ -0.38
CTSB-222ENST00000531551 CT83Q5H943 113 aa12.65□□□□□ -0.38
CTSB-222ENST00000531551 FER1L6-AS1Q8NA97 138 aa12.65□□□□□ -0.38
CTSB-222ENST00000531551 ANAPC16Q96DE5 110 aa12.65□□□□□ -0.38
CTSB-222ENST00000531551 IL36BQ9NZH7 164 aa12.65□□□□□ -0.38
CTSB-222ENST00000531551 PHLDA3Q9Y5J5 127 aa12.65□□□□□ -0.38
CTSB-222ENST00000531551 SNAPINO95295 136 aa12.64□□□□□ -0.39
CTSB-222ENST00000531551 CXCL1P09341 107 aa12.64□□□□□ -0.39
CTSB-222ENST00000531551 FAM222AQ5U5X8 452 aa12.64□□□□□ -0.39
CTSB-222ENST00000531551 TSKUQ8WUA8 353 aa12.64□□□□□ -0.39
CTSB-222ENST00000531551 RPS10P5Q9NQ39 176 aa12.64□□□□□ -0.39
CTSB-222ENST00000531551 U3KQK5 164 aa12.64□□□□□ -0.39
CTSB-222ENST00000531551 TRGV1A0A0A0MS02 117 aa12.63□□□□□ -0.39
CTSB-222ENST00000531551 C7orf77A4D0Y5 90 aa12.63□□□□□ -0.39
CTSB-222ENST00000531551 DNLZQ5SXM8 178 aa12.63□□□□□ -0.39
CTSB-222ENST00000531551 GTSF1Q8WW33 167 aa12.63□□□□□ -0.39
CTSB-222ENST00000531551 C9orf85Q96MD7 179 aa12.63□□□□□ -0.39
CTSB-222ENST00000531551 SPXQ9BT56 116 aa12.63□□□□□ -0.39
CTSB-222ENST00000531551 C11orf68Q9H3H3 251 aaKnown RBP12.63□□□□□ -0.39
CTSB-222ENST00000531551 MRPL16Q9NX20 251 aaKnown RBP12.63□□□□□ -0.39
CTSB-222ENST00000531551 CELA1Q9UNI1 258 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms