RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 PAGE4O60829 102 aa10.14□□□□□ -0.79
FOXR1-202ENST00000531539 GCGP01275 180 aa10.14□□□□□ -0.79
FOXR1-202ENST00000531539 PPT1P50897 306 aa10.14□□□□□ -0.79
FOXR1-202ENST00000531539 SMUG1Q53HV7 270 aa10.14□□□□□ -0.79
FOXR1-202ENST00000531539 DPPA3Q6W0C5 159 aa10.14□□□□□ -0.79
FOXR1-202ENST00000531539 IGHV3-53P01767 116 aa10.13□□□□□ -0.79
FOXR1-202ENST00000531539 LGALS9BQ3B8N2 356 aa10.13□□□□□ -0.79
FOXR1-202ENST00000531539 TDRG1Q3Y452 100 aa10.13□□□□□ -0.79
FOXR1-202ENST00000531539 ZFP69Q49AA0 526 aa10.13□□□□□ -0.79
FOXR1-202ENST00000531539 HIST1H2BAQ96A08 127 aa10.13□□□□□ -0.79
FOXR1-202ENST00000531539 KCNS1Q96KK3 526 aa10.13□□□□□ -0.79
FOXR1-202ENST00000531539 SPXQ9BT56 116 aa10.13□□□□□ -0.79
FOXR1-202ENST00000531539 SDF2L1Q9HCN8 221 aa10.13□□□□□ -0.79
FOXR1-202ENST00000531539 RNF212Q495C1 297 aa10.12□□□□□ -0.79
FOXR1-202ENST00000531539 EIF5AL1Q6IS14 154 aaKnown RBP10.12□□□□□ -0.79
FOXR1-202ENST00000531539 C11orf21Q9P2W6 132 aa10.12□□□□□ -0.79
FOXR1-202ENST00000531539 ARL2-SNX15V9GYD0 113 aa10.12□□□□□ -0.79
FOXR1-202ENST00000531539 IGHV3-16A0A0C4DH30 117 aa10.11□□□□□ -0.79
FOXR1-202ENST00000531539 M0R2N4 97 aa10.11□□□□□ -0.79
FOXR1-202ENST00000531539 TYMSP04818 313 aa10.11□□□□□ -0.79
FOXR1-202ENST00000531539 PFN1P07737 140 aaKnown RBP10.11□□□□□ -0.79
FOXR1-202ENST00000531539 UBE2G1P62253 170 aa10.11□□□□□ -0.79
FOXR1-202ENST00000531539 C18orf15Q96N68 181 aa10.11□□□□□ -0.79
FOXR1-202ENST00000531539 VPS13DQ5THJ4 4388 aa10.11□□□□□ -0.79
FOXR1-202ENST00000531539 FABP5P3A8MUU1 101 aa10.1□□□□□ -0.79
FOXR1-202ENST00000531539 CCL20P78556 96 aa10.1□□□□□ -0.79
FOXR1-202ENST00000531539 SLC51BQ86UW2 128 aa10.1□□□□□ -0.79
FOXR1-202ENST00000531539 IGLV2-18A0A075B6J9 118 aa10.09□□□□□ -0.79
FOXR1-202ENST00000531539 A0A1B0GVG6 124 aa10.09□□□□□ -0.79
FOXR1-202ENST00000531539 RAB5CP51148 216 aa10.09□□□□□ -0.79
FOXR1-202ENST00000531539 CCL18P55774 89 aa10.09□□□□□ -0.79
FOXR1-202ENST00000531539 Q86TA4 180 aa10.09□□□□□ -0.79
FOXR1-202ENST00000531539 RASL10AQ92737 203 aa10.09□□□□□ -0.79
FOXR1-202ENST00000531539 FMC1Q96HJ9 113 aa10.09□□□□□ -0.79
FOXR1-202ENST00000531539 VSIG2Q96IQ7 327 aa10.09□□□□□ -0.79
FOXR1-202ENST00000531539 ZFP30Q9Y2G7 519 aa10.09□□□□□ -0.79
FOXR1-202ENST00000531539 TRGV4A0A0C4DH28 118 aa10.08□□□□□ -0.8
FOXR1-202ENST00000531539 C9JCJ5 164 aa10.08□□□□□ -0.8
FOXR1-202ENST00000531539 M0R2P5 195 aa10.08□□□□□ -0.8
FOXR1-202ENST00000531539 PAX4O43316 350 aa10.08□□□□□ -0.8
FOXR1-202ENST00000531539 SFTA3P0C7M3 94 aa10.08□□□□□ -0.8
FOXR1-202ENST00000531539 AKR1C3P42330 323 aa10.08□□□□□ -0.8
FOXR1-202ENST00000531539 SULT1A2P50226 295 aa10.08□□□□□ -0.8
FOXR1-202ENST00000531539 FHL2Q14192 279 aa10.08□□□□□ -0.8
FOXR1-202ENST00000531539 TCEAL7Q9BRU2 100 aa10.08□□□□□ -0.8
FOXR1-202ENST00000531539 HHLA3Q9XRX5 114 aa10.08□□□□□ -0.8
FOXR1-202ENST00000531539 H3BNG1 76 aa10.07□□□□□ -0.8
FOXR1-202ENST00000531539 ORM1P02763 201 aa10.07□□□□□ -0.8
FOXR1-202ENST00000531539 C9orf62Q8N4C0 152 aa10.07□□□□□ -0.8
FOXR1-202ENST00000531539 OR4C5Q8NGB2 326 aa10.07□□□□□ -0.8
FOXR1-202ENST00000531539 ZC2HC1AQ96GY0 325 aa10.07□□□□□ -0.8
FOXR1-202ENST00000531539 ZNF479Q96JC4 524 aa10.07□□□□□ -0.8
FOXR1-202ENST00000531539 GNG13Q9P2W3 67 aa10.07□□□□□ -0.8
FOXR1-202ENST00000531539 LINC00588Q9Y4M8 146 aa10.07□□□□□ -0.8
FOXR1-202ENST00000531539 TRAV1-1A0A0B4J248 108 aa10.06□□□□□ -0.8
FOXR1-202ENST00000531539 TEX46H3BTG2 121 aa10.06□□□□□ -0.8
FOXR1-202ENST00000531539 CRIP1P50238 77 aa10.06□□□□□ -0.8
FOXR1-202ENST00000531539 SLAQ13239 276 aa10.06□□□□□ -0.8
FOXR1-202ENST00000531539 PRO0255Q9UI72 69 aa10.06□□□□□ -0.8
FOXR1-202ENST00000531539 KMT2AQ03164 3969 aa10.06□□□□□ -0.8
FOXR1-202ENST00000531539 NACAE9PAV3 2078 aa10.06□□□□□ -0.8
FOXR1-202ENST00000531539 MUC4Q99102 2169 aa10.05□□□□□ -0.8
FOXR1-202ENST00000531539 IGKV3D-20A0A0C4DH25 116 aa10.05□□□□□ -0.8
FOXR1-202ENST00000531539 TRBV6-1A0A0K0K1D8 114 aa10.05□□□□□ -0.8
FOXR1-202ENST00000531539 SCO2A0A1W2PP80 73 aa10.05□□□□□ -0.8
FOXR1-202ENST00000531539 S100A9P06702 114 aaKnown RBP10.05□□□□□ -0.8
FOXR1-202ENST00000531539 S100A4P26447 101 aaKnown RBP10.05□□□□□ -0.8
FOXR1-202ENST00000531539 CRYBA4P53673 196 aa10.05□□□□□ -0.8
FOXR1-202ENST00000531539 FAM3BP58499 235 aaPredicted RBP10.05□□□□□ -0.8
FOXR1-202ENST00000531539 ESRGQ1W209 222 aa10.05□□□□□ -0.8
FOXR1-202ENST00000531539 ZNF876PQ49A33 203 aa10.05□□□□□ -0.8
FOXR1-202ENST00000531539 A0A096LPF7 62 aa10.04□□□□□ -0.8
FOXR1-202ENST00000531539 TRAV4A0A0B4J268 109 aa10.04□□□□□ -0.8
FOXR1-202ENST00000531539 B4DEV8 164 aa10.04□□□□□ -0.8
FOXR1-202ENST00000531539 M0R036 132 aa10.04□□□□□ -0.8
FOXR1-202ENST00000531539 SH2D1AO60880 128 aa10.04□□□□□ -0.8
FOXR1-202ENST00000531539 LTAP01374 205 aa10.04□□□□□ -0.8
FOXR1-202ENST00000531539 FAM162BQ5T6X4 162 aa10.04□□□□□ -0.8
FOXR1-202ENST00000531539 BAGE2Q86Y30 109 aa10.04□□□□□ -0.8
FOXR1-202ENST00000531539 NHLRC2Q8NBF2 726 aa10.04□□□□□ -0.8
FOXR1-202ENST00000531539 MANBALQ9NQG1 85 aa10.04□□□□□ -0.8
FOXR1-202ENST00000531539 GRIFINA4D1Z8 144 aa10.03□□□□□ -0.8
FOXR1-202ENST00000531539 PGPEP1LA6NFU8 196 aa10.03□□□□□ -0.8
FOXR1-202ENST00000531539 RNASE3P12724 160 aaKnown RBP10.03□□□□□ -0.8
FOXR1-202ENST00000531539 ASIPP42127 132 aa10.03□□□□□ -0.8
FOXR1-202ENST00000531539 NKX2-5P52952 324 aaPredicted RBP10.03□□□□□ -0.8
FOXR1-202ENST00000531539 COX8CQ7Z4L0 72 aa10.03□□□□□ -0.8
FOXR1-202ENST00000531539 ZNRF2Q8NHG8 242 aa10.03□□□□□ -0.8
FOXR1-202ENST00000531539 C9orf85Q96MD7 179 aa10.03□□□□□ -0.8
FOXR1-202ENST00000531539 ICOSQ9Y6W8 199 aa10.03□□□□□ -0.8
FOXR1-202ENST00000531539 EPPK1P58107 5090 aaKnown RBP10.02□□□□□ -0.8
FOXR1-202ENST00000531539 TMSB15BA0A087X1C1 80 aa10.02□□□□□ -0.81
FOXR1-202ENST00000531539 KRBOX1C9JBD0 128 aa10.02□□□□□ -0.81
FOXR1-202ENST00000531539 ZNF674Q2M3X9 581 aa10.02□□□□□ -0.81
FOXR1-202ENST00000531539 Q9H8V8 135 aa10.02□□□□□ -0.81
FOXR1-202ENST00000531539 IGHV3-73A0A0B4J1V6 119 aa10.01□□□□□ -0.81
FOXR1-202ENST00000531539 RS1O15537 224 aa10.01□□□□□ -0.81
FOXR1-202ENST00000531539 MRPL23Q16540 153 aaKnown RBP10.01□□□□□ -0.81
FOXR1-202ENST00000531539 ZNF506Q5JVG8 444 aa10.01□□□□□ -0.81
FOXR1-202ENST00000531539 ALKAL2Q6UX46 152 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms