RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 PLAC8L1A1L4L8 177 aa12.65□□□□□ -0.38
PTPN11-204ENST00000531326 HTN1P15515 57 aa12.65□□□□□ -0.38
PTPN11-204ENST00000531326 ZNF80P51504 273 aaPredicted RBP12.65□□□□□ -0.38
PTPN11-204ENST00000531326 UBE2G1P62253 170 aa12.65□□□□□ -0.38
PTPN11-204ENST00000531326 SAPCD1Q5SSQ6 148 aa12.65□□□□□ -0.38
PTPN11-204ENST00000531326 TMEM189A5PLL7 270 aa12.64□□□□□ -0.39
PTPN11-204ENST00000531326 LTAP01374 205 aa12.64□□□□□ -0.39
PTPN11-204ENST00000531326 MED14OSP0DP75 135 aa12.64□□□□□ -0.39
PTPN11-204ENST00000531326 LGALS9BQ3B8N2 356 aa12.64□□□□□ -0.39
PTPN11-204ENST00000531326 COX8CQ7Z4L0 72 aa12.64□□□□□ -0.39
PTPN11-204ENST00000531326 RNASE8Q8TDE3 154 aaKnown RBP12.64□□□□□ -0.39
PTPN11-204ENST00000531326 DKK2Q9UBU2 259 aa12.64□□□□□ -0.39
PTPN11-204ENST00000531326 RBFOX3A6NFN3 312 aa12.63□□□□□ -0.39
PTPN11-204ENST00000531326 PDE6DO43924 150 aa12.63□□□□□ -0.39
PTPN11-204ENST00000531326 GCGP01275 180 aa12.63□□□□□ -0.39
PTPN11-204ENST00000531326 S100A9P06702 114 aaKnown RBP12.63□□□□□ -0.39
PTPN11-204ENST00000531326 SMUG1Q53HV7 270 aa12.63□□□□□ -0.39
PTPN11-204ENST00000531326 ZNF506Q5JVG8 444 aa12.63□□□□□ -0.39
PTPN11-204ENST00000531326 FAM222AQ5U5X8 452 aa12.63□□□□□ -0.39
PTPN11-204ENST00000531326 TMEM263Q8WUH6 116 aaKnown RBP12.63□□□□□ -0.39
PTPN11-204ENST00000531326 DERL1Q9BUN8 251 aa12.63□□□□□ -0.39
PTPN11-204ENST00000531326 ZFP30Q9Y2G7 519 aa12.63□□□□□ -0.39
PTPN11-204ENST00000531326 MUC4Q99102 2169 aa12.63□□□□□ -0.39
PTPN11-204ENST00000531326 IGLV2-18A0A075B6J9 118 aa12.62□□□□□ -0.39
PTPN11-204ENST00000531326 IGHV1OR15-1A0A075B7D0 117 aa12.62□□□□□ -0.39
PTPN11-204ENST00000531326 TRAV21A0A0B4J279 112 aa12.62□□□□□ -0.39
PTPN11-204ENST00000531326 RPL35P42766 123 aaKnown RBP12.62□□□□□ -0.39
PTPN11-204ENST00000531326 IFITM2Q01629 132 aa12.62□□□□□ -0.39
PTPN11-204ENST00000531326 Q6ZR54 194 aa12.62□□□□□ -0.39
PTPN11-204ENST00000531326 EIF4E3Q8N5X7 224 aaKnown RBP12.62□□□□□ -0.39
PTPN11-204ENST00000531326 C16orf74Q96GX8 76 aa12.62□□□□□ -0.39
PTPN11-204ENST00000531326 RGS13O14921 159 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 ANXA2RQ3ZCQ2 193 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 TOR2AQ5JU69 321 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 MUC21Q5SSG8 566 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 ZNF493Q6ZR52 646 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 ZC2HC1AQ96GY0 325 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 FAM210BQ96KR6 192 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 FAM210AQ96ND0 272 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 C11orf21Q9P2W6 132 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 TP53TG3Q9ULZ0 132 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 NACAE9PAV3 2078 aa12.61□□□□□ -0.39
PTPN11-204ENST00000531326 CBY3A6NI87 242 aa12.6□□□□□ -0.39
PTPN11-204ENST00000531326 PFN1P07737 140 aaKnown RBP12.6□□□□□ -0.39
PTPN11-204ENST00000531326 CRIP1P50238 77 aa12.6□□□□□ -0.39
PTPN11-204ENST00000531326 TMEM183AQ8IXX5 376 aa12.6□□□□□ -0.39
PTPN11-204ENST00000531326 C11orf72Q8NBR9 251 aa12.6□□□□□ -0.39
PTPN11-204ENST00000531326 MLST8Q9BVC4 326 aa12.6□□□□□ -0.39
PTPN11-204ENST00000531326 MED9Q9NWA0 146 aa12.6□□□□□ -0.39
PTPN11-204ENST00000531326 ABCA13Q86UQ4 5058 aa12.59□□□□□ -0.39
PTPN11-204ENST00000531326 TDRG1Q3Y452 100 aa12.59□□□□□ -0.39
PTPN11-204ENST00000531326 BAGE2Q86Y30 109 aa12.59□□□□□ -0.39
PTPN11-204ENST00000531326 UBE2DNLQ8IWF7 75 aa12.59□□□□□ -0.39
PTPN11-204ENST00000531326 NHLRC2Q8NBF2 726 aa12.59□□□□□ -0.39
PTPN11-204ENST00000531326 NAGKQ9UJ70 344 aa12.59□□□□□ -0.39
PTPN11-204ENST00000531326 TEX48A0A1B0GUV7 120 aa12.58□□□□□ -0.4
PTPN11-204ENST00000531326 RAB19A4D1S5 217 aa12.58□□□□□ -0.4
PTPN11-204ENST00000531326 HTN3P15516 51 aa12.58□□□□□ -0.4
PTPN11-204ENST00000531326 FAM159AQ6UWV7 190 aa12.58□□□□□ -0.4
PTPN11-204ENST00000531326 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.4
PTPN11-204ENST00000531326 TMEM250H0YL14 139 aa12.57□□□□□ -0.4
PTPN11-204ENST00000531326 NDUFS6O75380 124 aaKnown RBP12.57□□□□□ -0.4
PTPN11-204ENST00000531326 CENPWQ5EE01 88 aa12.57□□□□□ -0.4
PTPN11-204ENST00000531326 NOP10Q9NPE3 64 aaKnown RBP12.57□□□□□ -0.4
PTPN11-204ENST00000531326 GSN-AS1Q9NRJ2 163 aa12.57□□□□□ -0.4
PTPN11-204ENST00000531326 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
PTPN11-204ENST00000531326 LYRM9A8MSI8 78 aa12.56□□□□□ -0.4
PTPN11-204ENST00000531326 FABP5P3A8MUU1 101 aa12.56□□□□□ -0.4
PTPN11-204ENST00000531326 GNRH2O43555 120 aa12.56□□□□□ -0.4
PTPN11-204ENST00000531326 SH2D1AO60880 128 aa12.56□□□□□ -0.4
PTPN11-204ENST00000531326 IGLV2-8P01709 118 aa12.56□□□□□ -0.4
PTPN11-204ENST00000531326 ZNF674Q2M3X9 581 aa12.56□□□□□ -0.4
PTPN11-204ENST00000531326 RNF212Q495C1 297 aa12.56□□□□□ -0.4
PTPN11-204ENST00000531326 IBA57Q5T440 356 aaKnown RBP12.56□□□□□ -0.4
PTPN11-204ENST00000531326 TMEM88Q6PEY1 159 aa12.56□□□□□ -0.4
PTPN11-204ENST00000531326 MDFICQ9P1T7 246 aa12.56□□□□□ -0.4
PTPN11-204ENST00000531326 TIMM8BQ9Y5J9 83 aaPredicted RBP12.56□□□□□ -0.4
PTPN11-204ENST00000531326 TRGV11A0A075B6L2 103 aa12.55□□□□□ -0.4
PTPN11-204ENST00000531326 IGKV3D-20A0A0C4DH25 116 aa12.55□□□□□ -0.4
PTPN11-204ENST00000531326 TYMSP04818 313 aa12.55□□□□□ -0.4
PTPN11-204ENST00000531326 TCL1AP56279 114 aa12.55□□□□□ -0.4
PTPN11-204ENST00000531326 DAZ2Q13117 558 aaKnown RBP12.55□□□□□ -0.4
PTPN11-204ENST00000531326 FAM162BQ5T6X4 162 aa12.55□□□□□ -0.4
PTPN11-204ENST00000531326 ZNF575Q86XF7 245 aa12.55□□□□□ -0.4
PTPN11-204ENST00000531326 KCNS1Q96KK3 526 aa12.55□□□□□ -0.4
PTPN11-204ENST00000531326 SDF2L1Q9HCN8 221 aa12.55□□□□□ -0.4
PTPN11-204ENST00000531326 IGHV3-16A0A0C4DH30 117 aa12.54□□□□□ -0.4
PTPN11-204ENST00000531326 SNURFLB1AK76 121 aa12.54□□□□□ -0.4
PTPN11-204ENST00000531326 SRP19P09132 144 aaKnown RBP12.54□□□□□ -0.4
PTPN11-204ENST00000531326 GNG4P50150 75 aa12.54□□□□□ -0.4
PTPN11-204ENST00000531326 RAB14P61106 215 aa12.54□□□□□ -0.4
PTPN11-204ENST00000531326 SRSF3P84103 164 aaKnown RBP12.54□□□□□ -0.4
PTPN11-204ENST00000531326 CLLU1Q5K131 121 aa12.54□□□□□ -0.4
PTPN11-204ENST00000531326 LINC00612Q8N6U2 182 aa12.54□□□□□ -0.4
PTPN11-204ENST00000531326 PARLQ9H300 379 aa12.54□□□□□ -0.4
PTPN11-204ENST00000531326 PGPEP1LA6NFU8 196 aa12.53□□□□□ -0.4
PTPN11-204ENST00000531326 DAD1P61803 113 aa12.53□□□□□ -0.4
PTPN11-204ENST00000531326 ZNF415Q09FC8 603 aa12.53□□□□□ -0.4
PTPN11-204ENST00000531326 KRTAP4-5Q9BYR2 181 aa12.53□□□□□ -0.4
PTPN11-204ENST00000531326 C9JCJ5 164 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms