RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 PSG8Q9UQ74 426 aa8.93□□□□□ -0.98
USP35-207ENST00000530546 TRBV6-1A0A0K0K1D8 114 aa8.93□□□□□ -0.98
USP35-207ENST00000530546 SCGB2A1O75556 95 aa8.93□□□□□ -0.98
USP35-207ENST00000530546 ARMS2P0C7Q2 107 aa8.93□□□□□ -0.98
USP35-207ENST00000530546 HLA-DMBP28068 263 aa8.92□□□□□ -0.98
USP35-207ENST00000530546 LOXL1Q08397 574 aaPredicted RBP8.92□□□□□ -0.98
USP35-207ENST00000530546 TAL2Q16559 108 aa8.92□□□□□ -0.98
USP35-207ENST00000530546 FAM106AQ4KMX7 169 aa8.92□□□□□ -0.98
USP35-207ENST00000530546 PRO0461Q9UI25 63 aa8.92□□□□□ -0.98
USP35-207ENST00000530546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.92□□□□□ -0.982e-6■■■□□ 15.6
USP35-207ENST00000530546 H3BMG7 143 aa8.92□□□□□ -0.98
USP35-207ENST00000530546 TCTAP57738 103 aa8.92□□□□□ -0.98
USP35-207ENST00000530546 ATP5G2Q06055 141 aa8.92□□□□□ -0.98
USP35-207ENST00000530546 BBC3Q96PG8 261 aaPredicted RBP8.92□□□□□ -0.98
USP35-207ENST00000530546 ERG28Q9UKR5 140 aa8.92□□□□□ -0.98
USP35-207ENST00000530546 IGKV2-40A0A087WW87 121 aaPredicted RBP8.91□□□□□ -0.98
USP35-207ENST00000530546 IGKV2D-40P01614 121 aaPredicted RBP8.91□□□□□ -0.98
USP35-207ENST00000530546 PGPEP1Q9NXJ5 209 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 MOB4Q9Y3A3 225 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 POLQO75417 2590 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 SPINK8P0C7L1 97 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 RPL7P18124 248 aaKnown RBP8.91□□□□□ -0.98
USP35-207ENST00000530546 C8orf49Q96NF6 230 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 TPPP3Q9BW30 176 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 ZMAT4Q9H898 229 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 HIF1ANQ9NWT6 349 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 CELSR2Q9HCU4 2923 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 APOMO95445 188 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 ORMDL3Q8N138 153 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 LYPD1Q8N2G4 141 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 CCDC140Q96MF4 163 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 PRELID3AQ96N28 172 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 SMAD5-AS1Q9Y6J3 95 aa8.91□□□□□ -0.98
USP35-207ENST00000530546 CENPEQ02224 2701 aa8.9□□□□□ -0.98
USP35-207ENST00000530546 TRBV25-1A0A075B6N4 114 aa8.9□□□□□ -0.98
USP35-207ENST00000530546 ZNF785A8K8V0 405 aa8.9□□□□□ -0.98
USP35-207ENST00000530546 D6R8Y8 96 aa8.9□□□□□ -0.98
USP35-207ENST00000530546 H3BUX3 64 aa8.9□□□□□ -0.98
USP35-207ENST00000530546 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
USP35-207ENST00000530546 TMEM75Q8N9X5 138 aa8.9□□□□□ -0.98
USP35-207ENST00000530546 SPXQ9BT56 116 aa8.9□□□□□ -0.98
USP35-207ENST00000530546 TMSB15BA0A087X1C1 80 aa8.9□□□□□ -0.99
USP35-207ENST00000530546 TRAV41A0A0B4J266 112 aa8.9□□□□□ -0.99
USP35-207ENST00000530546 MSMBP08118 114 aa8.9□□□□□ -0.99
USP35-207ENST00000530546 FOXI1Q12951 378 aa8.9□□□□□ -0.99
USP35-207ENST00000530546 MAPK1IP1LQ8NDC0 245 aa8.9□□□□□ -0.99
USP35-207ENST00000530546 EEF1AKMT3Q96AZ1 226 aa8.9□□□□□ -0.99
USP35-207ENST00000530546 C1QTNF4Q9BXJ3 329 aa8.9□□□□□ -0.99
USP35-207ENST00000530546 LRRK2Q5S007 2527 aa8.9□□□□□ -0.99
USP35-207ENST00000530546 LOC389332A0A1B0GUA5 103 aa8.89□□□□□ -0.99
USP35-207ENST00000530546 CDIP1Q9H305 208 aa8.89□□□□□ -0.99
USP35-207ENST00000530546 DKK2Q9UBU2 259 aa8.89□□□□□ -0.99
USP35-207ENST00000530546 CSPG4Q6UVK1 2322 aa8.89□□□□□ -0.99
USP35-207ENST00000530546 EVI2AP22794 236 aa8.89□□□□□ -0.99
USP35-207ENST00000530546 INSL3P51460 131 aa8.89□□□□□ -0.99
USP35-207ENST00000530546 Q8TAT8 98 aa8.89□□□□□ -0.99
USP35-207ENST00000530546 HHLA3Q9XRX5 114 aa8.89□□□□□ -0.99
USP35-207ENST00000530546 A0A1B0GWB2 263 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 AVPP01185 164 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 TRGV3P03979 118 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 CRIP1P50238 77 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 PDE6HQ13956 83 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 RRN3P1Q2M238 152 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 C12orf74Q32Q52 190 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 FAM104BQ5XKR9 115 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 SYT8Q8NBV8 401 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 C20orf78Q9BR46 151 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 VCX2Q9H322 139 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 ZFAND3Q9H8U3 227 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 USP9YO00507 2555 aaPredicted RBP8.88□□□□□ -0.99
USP35-207ENST00000530546 IGKV2D-26A0A0A0MRZ7 120 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 RNF182Q8N6D2 247 aa8.88□□□□□ -0.99
USP35-207ENST00000530546 CSMD2Q7Z408 3487 aa8.87□□□□□ -0.99
USP35-207ENST00000530546 Q6ZUT4 128 aa8.87□□□□□ -0.99
USP35-207ENST00000530546 IGHV3-11P01762 117 aa8.87□□□□□ -0.99
USP35-207ENST00000530546 IGKCP01834 107 aa8.87□□□□□ -0.99
USP35-207ENST00000530546 BLCAPP62952 87 aa8.87□□□□□ -0.99
USP35-207ENST00000530546 HERV-K104P63124 156 aa8.87□□□□□ -0.99
USP35-207ENST00000530546 GAGE5Q13069 117 aa8.87□□□□□ -0.99
USP35-207ENST00000530546 GAGE6Q13070 117 aa8.87□□□□□ -0.99
USP35-207ENST00000530546 Q6ZS46 218 aa8.87□□□□□ -0.99
USP35-207ENST00000530546 ERCC8Q13216 396 aa8.86□□□□□ -0.99
USP35-207ENST00000530546 RNF183Q96D59 192 aa8.86□□□□□ -0.99
USP35-207ENST00000530546 CLPSL1A2RUU4 121 aa8.86□□□□□ -0.99
USP35-207ENST00000530546 LINC01546A6NGU7 62 aa8.86□□□□□ -0.99
USP35-207ENST00000530546 BUB3O43684 328 aa8.86□□□□□ -0.99
USP35-207ENST00000530546 COX6B1P14854 86 aa8.86□□□□□ -0.99
USP35-207ENST00000530546 AMTNQ6UX39 209 aa8.86□□□□□ -0.99
USP35-207ENST00000530546 EPG5Q9HCE0 2579 aa8.86□□□□□ -0.99
USP35-207ENST00000530546 TRBV7-1A0A0A6YYK4 115 aa8.85□□□□□ -0.99
USP35-207ENST00000530546 B4DSR2 109 aa8.85□□□□□ -0.99
USP35-207ENST00000530546 PRAC2D3DTV9 90 aa8.85□□□□□ -0.99
USP35-207ENST00000530546 TRBV12-3P01733 135 aa8.85□□□□□ -0.99
USP35-207ENST00000530546 MT-ATP8P03928 68 aa8.85□□□□□ -0.99
USP35-207ENST00000530546 CITED1Q99966 193 aa8.85□□□□□ -0.99
USP35-207ENST00000530546 IGHG4P01861 327 aa8.85□□□□□ -0.99
USP35-207ENST00000530546 METTL26Q96S19 204 aa8.85□□□□□ -0.99
USP35-207ENST00000530546 ANAPC13Q9BS18 74 aa8.85□□□□□ -0.99
USP35-207ENST00000530546 LINC01619G3V211 115 aa8.85□□□□□ -0.99
USP35-207ENST00000530546 SH2D1AO60880 128 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms