RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 LAGE3Q14657 143 aa14.34□□□□□ -0.11
TM9SF1-206ENST00000528669 TMEM160Q9NX00 188 aa14.34□□□□□ -0.11
TM9SF1-206ENST00000528669 COL12A1Q99715 3063 aa14.33□□□□□ -0.12
TM9SF1-206ENST00000528669 IGHV4-61A0A0C4DH41 118 aa14.33□□□□□ -0.12
TM9SF1-206ENST00000528669 CDKN1BP46527 198 aa14.33□□□□□ -0.12
TM9SF1-206ENST00000528669 ZC2HC1BQ5TFG8 222 aa14.33□□□□□ -0.12
TM9SF1-206ENST00000528669 IGHV4-4A0A075B6R2 117 aa14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 M0R381 172 aa14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 DPM2O94777 84 aa14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 IGHV4-38-2P0DP08 117 aa14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 RPL11P62913 178 aaKnown RBP14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 LCNL1Q6ZST4 164 aa14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 MAP1AP78559 2803 aaPredicted RBP14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 ATP5LO75964 103 aa14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 OCIAD2Q56VL3 154 aa14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 ZFAND2AQ8N6M9 145 aa14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 MYOZ3Q8TDC0 251 aa14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 MRPL35Q9NZE8 188 aaKnown RBP14.32□□□□□ -0.12
TM9SF1-206ENST00000528669 A0A0G2JLM5 398 aa14.31□□□□□ -0.12
TM9SF1-206ENST00000528669 F6UB75 175 aa14.31□□□□□ -0.12
TM9SF1-206ENST00000528669 KLK15Q9H2R5 256 aa14.31□□□□□ -0.12
TM9SF1-206ENST00000528669 GCSHP23434 173 aa14.3□□□□□ -0.12
TM9SF1-206ENST00000528669 CRIP2P52943 208 aaPredicted RBP14.3□□□□□ -0.12
TM9SF1-206ENST00000528669 OR10J6PQ8NGY7 276 aa14.3□□□□□ -0.12
TM9SF1-206ENST00000528669 PRSS47A8MTI9 375 aa14.3□□□□□ -0.12
TM9SF1-206ENST00000528669 NDUFA4O00483 81 aa14.3□□□□□ -0.12
TM9SF1-206ENST00000528669 LINC00477Q96M19 166 aa14.3□□□□□ -0.12
TM9SF1-206ENST00000528669 SOCS3O14543 225 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 S100A4P26447 101 aaKnown RBP14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 Q6ZS46 218 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 ATP6V0BQ99437 205 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 H3BUX3 64 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 PF4V1P10720 104 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 FXYD2P54710 66 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 BLCAPP62952 87 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 SRSF1Q07955 248 aaKnown RBP eCLIP14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 UFSP1Q6NVU6 142 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 CHAC1Q9BUX1 264 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 SMPXQ9UHP9 88 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 LENEPQ9Y5L5 61 aa14.29□□□□□ -0.12
TM9SF1-206ENST00000528669 MEGF9Q9H1U4 602 aa14.28□□□□□ -0.12
TM9SF1-206ENST00000528669 SPG11Q96JI7 2443 aa14.28□□□□□ -0.12
TM9SF1-206ENST00000528669 TRAV21A0A0B4J279 112 aa14.27□□□□□ -0.12
TM9SF1-206ENST00000528669 RNASE4P34096 147 aaKnown RBP14.27□□□□□ -0.12
TM9SF1-206ENST00000528669 ANXA2RQ3ZCQ2 193 aa14.27□□□□□ -0.12
TM9SF1-206ENST00000528669 C14orf178Q8N769 122 aaPredicted RBP14.27□□□□□ -0.12
TM9SF1-206ENST00000528669 SMIM2Q9BVW6 85 aa14.27□□□□□ -0.12
TM9SF1-206ENST00000528669 TRBV25-1A0A075B6N4 114 aa14.27□□□□□ -0.13
TM9SF1-206ENST00000528669 GTF2H5Q6ZYL4 71 aa14.27□□□□□ -0.13
TM9SF1-206ENST00000528669 RPL39LQ96EH5 51 aaKnown RBP14.27□□□□□ -0.13
TM9SF1-206ENST00000528669 MRAP2Q96G30 205 aa14.27□□□□□ -0.13
TM9SF1-206ENST00000528669 PIMREGQ9BSJ6 248 aa14.27□□□□□ -0.13
TM9SF1-206ENST00000528669 OVOL1O14753 267 aa14.26□□□□□ -0.13
TM9SF1-206ENST00000528669 SRD5A1P18405 259 aa14.26□□□□□ -0.13
TM9SF1-206ENST00000528669 GNRH2O43555 120 aa14.26□□□□□ -0.13
TM9SF1-206ENST00000528669 RASL10AQ92737 203 aa14.26□□□□□ -0.13
TM9SF1-206ENST00000528669 PHLDA3Q9Y5J5 127 aa14.26□□□□□ -0.13
TM9SF1-206ENST00000528669 A0A087WX48 190 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 K7EMI3 77 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 K7EP34 96 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 ASIPP42127 132 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 MAPKAPK5-AS1Q8N8E1 139 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 HIGD1BQ9P298 99 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 K7ERJ3 54 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 IGHG2P01859 326 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 MGPP08493 103 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 EDN2P20800 178 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 PSMG4Q5JS54 123 aa14.25□□□□□ -0.13
TM9SF1-206ENST00000528669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.24□□□□□ -0.134e-7■■■■■ 29.1
TM9SF1-206ENST00000528669 VPS25Q9BRG1 176 aa14.24□□□□□ -0.13
TM9SF1-206ENST00000528669 A0A1W2PPM0 123 aa14.24□□□□□ -0.13
TM9SF1-206ENST00000528669 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.24□□□□□ -0.13
TM9SF1-206ENST00000528669 SMIM13P0DJ93 91 aa14.24□□□□□ -0.13
TM9SF1-206ENST00000528669 SUMO2P61956 95 aaKnown RBP14.24□□□□□ -0.13
TM9SF1-206ENST00000528669 USMG5Q96IX5 58 aa14.24□□□□□ -0.13
TM9SF1-206ENST00000528669 CCL19Q99731 98 aa14.24□□□□□ -0.13
TM9SF1-206ENST00000528669 RHPN1-AS1Q9BWJ2 59 aa14.24□□□□□ -0.13
TM9SF1-206ENST00000528669 DPH3P1Q9H4G8 78 aa14.23□□□□□ -0.13
TM9SF1-206ENST00000528669 PRORYQ9H606 182 aa14.23□□□□□ -0.13
TM9SF1-206ENST00000528669 A6NDX4 124 aa14.23□□□□□ -0.13
TM9SF1-206ENST00000528669 SAP30O75446 220 aa14.23□□□□□ -0.13
TM9SF1-206ENST00000528669 C10orf105Q8TEF2 133 aa14.23□□□□□ -0.13
TM9SF1-206ENST00000528669 SPOCK3Q9BQ16 436 aa14.23□□□□□ -0.13
TM9SF1-206ENST00000528669 SPCS1Q9Y6A9 102 aa14.22□□□□□ -0.13
TM9SF1-206ENST00000528669 IGHV4-30-2A0A087WSY4 118 aa14.22□□□□□ -0.13
TM9SF1-206ENST00000528669 WFDC12Q8WWY7 111 aa14.22□□□□□ -0.13
TM9SF1-206ENST00000528669 FAM19A4Q96LR4 140 aa14.22□□□□□ -0.13
TM9SF1-206ENST00000528669 SCGB3A1Q96QR1 104 aa14.22□□□□□ -0.13
TM9SF1-206ENST00000528669 CELSR2Q9HCU4 2923 aa14.22□□□□□ -0.13
TM9SF1-206ENST00000528669 MUC4Q99102 2169 aa14.21□□□□□ -0.13
TM9SF1-206ENST00000528669 AGRNO00468 2067 aa14.21□□□□□ -0.13
TM9SF1-206ENST00000528669 RNASE3P12724 160 aaKnown RBP14.21□□□□□ -0.14
TM9SF1-206ENST00000528669 SAMD5Q5TGI4 173 aa14.21□□□□□ -0.14
TM9SF1-206ENST00000528669 NHP2Q9NX24 153 aaKnown RBP14.21□□□□□ -0.14
TM9SF1-206ENST00000528669 ORMDL2Q53FV1 153 aa14.2□□□□□ -0.14
TM9SF1-206ENST00000528669 CSPG4Q6UVK1 2322 aa14.2□□□□□ -0.14
TM9SF1-206ENST00000528669 RNF223E7ERA6 249 aa14.2□□□□□ -0.14
TM9SF1-206ENST00000528669 H3BUA1 57 aa14.2□□□□□ -0.14
TM9SF1-206ENST00000528669 ATP5J2P56134 94 aa14.2□□□□□ -0.14
TM9SF1-206ENST00000528669 TMEM95Q3KNT9 176 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 195.9 ms