RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 DNAH17Q9UFH2 4485 aa12.59□□□□□ -0.39
TRIM3-205ENST00000527237 A0A1B0GV50 99 aa12.59□□□□□ -0.39
TRIM3-205ENST00000527237 SFTA3P0C7M3 94 aa12.59□□□□□ -0.39
TRIM3-205ENST00000527237 LGALS9BQ3B8N2 356 aa12.59□□□□□ -0.39
TRIM3-205ENST00000527237 TMUB2Q71RG4 321 aa12.59□□□□□ -0.39
TRIM3-205ENST00000527237 FAM213BQ8TBF2 198 aa12.59□□□□□ -0.39
TRIM3-205ENST00000527237 FAT2Q9NYQ8 4349 aa12.58□□□□□ -0.39
TRIM3-205ENST00000527237 PEX7O00628 323 aa12.58□□□□□ -0.4
TRIM3-205ENST00000527237 RTL8CO15255 209 aa12.58□□□□□ -0.4
TRIM3-205ENST00000527237 IFNA7P01567 189 aa12.58□□□□□ -0.4
TRIM3-205ENST00000527237 SEC11BP0C7V7 166 aa12.58□□□□□ -0.4
TRIM3-205ENST00000527237 Q86TA4 180 aa12.58□□□□□ -0.4
TRIM3-205ENST00000527237 ZNRF2Q8NHG8 242 aa12.58□□□□□ -0.4
TRIM3-205ENST00000527237 ARL2-SNX15V9GYD0 113 aa12.58□□□□□ -0.4
TRIM3-205ENST00000527237 A0A096LPF7 62 aa12.57□□□□□ -0.4
TRIM3-205ENST00000527237 Q6ZNX1 250 aa12.57□□□□□ -0.4
TRIM3-205ENST00000527237 ZNF479Q96JC4 524 aa12.57□□□□□ -0.4
TRIM3-205ENST00000527237 SDF2L1Q9HCN8 221 aa12.57□□□□□ -0.4
TRIM3-205ENST00000527237 H3BNG1 76 aa12.56□□□□□ -0.4
TRIM3-205ENST00000527237 PFDN1O60925 122 aa12.56□□□□□ -0.4
TRIM3-205ENST00000527237 CCL18P55774 89 aa12.56□□□□□ -0.4
TRIM3-205ENST00000527237 FHL2Q14192 279 aa12.56□□□□□ -0.4
TRIM3-205ENST00000527237 SMUG1Q53HV7 270 aa12.56□□□□□ -0.4
TRIM3-205ENST00000527237 SPXQ9BT56 116 aa12.56□□□□□ -0.4
TRIM3-205ENST00000527237 hCG_2014768A0A024R1R8 64 aa12.55□□□□□ -0.4
TRIM3-205ENST00000527237 PFN1P07737 140 aaKnown RBP12.55□□□□□ -0.4
TRIM3-205ENST00000527237 ESRGQ1W209 222 aa12.55□□□□□ -0.4
TRIM3-205ENST00000527237 ZFP69Q49AA0 526 aa12.55□□□□□ -0.4
TRIM3-205ENST00000527237 TCTE3Q8IZS6 198 aa12.55□□□□□ -0.4
TRIM3-205ENST00000527237 TPT1P13693 172 aaKnown RBP12.54□□□□□ -0.4
TRIM3-205ENST00000527237 FAM3BP58499 235 aaPredicted RBP12.54□□□□□ -0.4
TRIM3-205ENST00000527237 LGALSLQ3ZCW2 172 aaPredicted RBP12.54□□□□□ -0.4
TRIM3-205ENST00000527237 CST9LP1Q5W188 147 aa12.54□□□□□ -0.4
TRIM3-205ENST00000527237 SFT2D1Q8WV19 159 aa12.54□□□□□ -0.4
TRIM3-205ENST00000527237 RASL10AQ92737 203 aa12.54□□□□□ -0.4
TRIM3-205ENST00000527237 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
TRIM3-205ENST00000527237 UMAD1C9J7I0 102 aa12.53□□□□□ -0.4
TRIM3-205ENST00000527237 M0R2P5 195 aa12.53□□□□□ -0.4
TRIM3-205ENST00000527237 PAGE4O60829 102 aa12.53□□□□□ -0.4
TRIM3-205ENST00000527237 CRYBA4P53673 196 aa12.53□□□□□ -0.4
TRIM3-205ENST00000527237 STOML3Q8TAV4 291 aa12.53□□□□□ -0.4
TRIM3-205ENST00000527237 MBD3L1Q8WWY6 194 aa12.53□□□□□ -0.4
TRIM3-205ENST00000527237 ZC2HC1AQ96GY0 325 aa12.53□□□□□ -0.4
TRIM3-205ENST00000527237 FBLL1A6NHQ2 334 aaKnown RBP12.52□□□□□ -0.41
TRIM3-205ENST00000527237 PAX4O43316 350 aa12.52□□□□□ -0.41
TRIM3-205ENST00000527237 PPT1P50897 306 aa12.52□□□□□ -0.41
TRIM3-205ENST00000527237 SAPCD1Q5SSQ6 148 aa12.52□□□□□ -0.41
TRIM3-205ENST00000527237 HIST1H2BAQ96A08 127 aa12.52□□□□□ -0.41
TRIM3-205ENST00000527237 C9orf85Q96MD7 179 aa12.52□□□□□ -0.41
TRIM3-205ENST00000527237 NKX6-2Q9C056 277 aaPredicted RBP12.52□□□□□ -0.41
TRIM3-205ENST00000527237 PRO0255Q9UI72 69 aa12.52□□□□□ -0.41
TRIM3-205ENST00000527237 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
TRIM3-205ENST00000527237 IGKV3D-20A0A0C4DH25 116 aa12.51□□□□□ -0.41
TRIM3-205ENST00000527237 TRGV4A0A0C4DH28 118 aa12.51□□□□□ -0.41
TRIM3-205ENST00000527237 NBDYA0A0U1RRE5 68 aa12.51□□□□□ -0.41
TRIM3-205ENST00000527237 RNASE3P12724 160 aaKnown RBP12.51□□□□□ -0.41
TRIM3-205ENST00000527237 KRTAP1-5Q9BYS1 174 aa12.51□□□□□ -0.41
TRIM3-205ENST00000527237 HHLA3Q9XRX5 114 aa12.51□□□□□ -0.41
TRIM3-205ENST00000527237 A0A1B0GVY2 172 aa12.5□□□□□ -0.41
TRIM3-205ENST00000527237 SCO2A0A1W2PP80 73 aa12.5□□□□□ -0.41
TRIM3-205ENST00000527237 PRSS29PA6NIE9 313 aa12.5□□□□□ -0.41
TRIM3-205ENST00000527237 C9JCJ5 164 aa12.5□□□□□ -0.41
TRIM3-205ENST00000527237 AKR1C3P42330 323 aa12.5□□□□□ -0.41
TRIM3-205ENST00000527237 CRIP1P50238 77 aa12.5□□□□□ -0.41
TRIM3-205ENST00000527237 EIF5AP63241 154 aaKnown RBP12.5□□□□□ -0.41
TRIM3-205ENST00000527237 DPPA3Q6W0C5 159 aa12.5□□□□□ -0.41
TRIM3-205ENST00000527237 LINC00336Q6ZUF6 198 aa12.5□□□□□ -0.41
TRIM3-205ENST00000527237 MRPS16Q9Y3D3 137 aaKnown RBP12.5□□□□□ -0.41
TRIM3-205ENST00000527237 ICOSQ9Y6W8 199 aa12.5□□□□□ -0.41
TRIM3-205ENST00000527237 LOC100131303A0A0U1RQF7 123 aa12.49□□□□□ -0.41
TRIM3-205ENST00000527237 C1QBP02746 253 aa12.49□□□□□ -0.41
TRIM3-205ENST00000527237 H2AFB1P0C5Y9 115 aa12.49□□□□□ -0.41
TRIM3-205ENST00000527237 UBE2G1P62253 170 aa12.49□□□□□ -0.41
TRIM3-205ENST00000527237 NHLRC2Q8NBF2 726 aa12.49□□□□□ -0.41
TRIM3-205ENST00000527237 OR4C5Q8NGB2 326 aa12.49□□□□□ -0.41
TRIM3-205ENST00000527237 FMC1Q96HJ9 113 aa12.49□□□□□ -0.41
TRIM3-205ENST00000527237 UPK3BQ9BT76 320 aa12.49□□□□□ -0.41
TRIM3-205ENST00000527237 PKD1P98161 4303 aa12.49□□□□□ -0.41
TRIM3-205ENST00000527237 PKHD1P08F94 4074 aa12.48□□□□□ -0.41
TRIM3-205ENST00000527237 PGPEP1LA6NFU8 196 aa12.48□□□□□ -0.41
TRIM3-205ENST00000527237 SH2D1AO60880 128 aa12.48□□□□□ -0.41
TRIM3-205ENST00000527237 Q9H8V8 135 aa12.48□□□□□ -0.41
TRIM3-205ENST00000527237 M0R036 132 aa12.47□□□□□ -0.41
TRIM3-205ENST00000527237 LTAP01374 205 aa12.47□□□□□ -0.41
TRIM3-205ENST00000527237 GYPEP15421 78 aa12.47□□□□□ -0.41
TRIM3-205ENST00000527237 CCL20P78556 96 aa12.47□□□□□ -0.41
TRIM3-205ENST00000527237 ZNF876PQ49A33 203 aa12.47□□□□□ -0.41
TRIM3-205ENST00000527237 ZNF506Q5JVG8 444 aa12.47□□□□□ -0.41
TRIM3-205ENST00000527237 C1orf134Q5TEV5 83 aa12.47□□□□□ -0.41
TRIM3-205ENST00000527237 AKAP14Q86UN6 197 aa12.47□□□□□ -0.41
TRIM3-205ENST00000527237 TRBV6-1A0A0K0K1D8 114 aa12.46□□□□□ -0.41
TRIM3-205ENST00000527237 FABP5P3A8MUU1 101 aa12.46□□□□□ -0.41
TRIM3-205ENST00000527237 K7EQD1 137 aa12.46□□□□□ -0.41
TRIM3-205ENST00000527237 SLAQ13239 276 aa12.46□□□□□ -0.41
TRIM3-205ENST00000527237 COX8CQ7Z4L0 72 aa12.46□□□□□ -0.41
TRIM3-205ENST00000527237 TCEAL7Q9BRU2 100 aa12.46□□□□□ -0.41
TRIM3-205ENST00000527237 IGHV3-73A0A0B4J1V6 119 aa12.45□□□□□ -0.42
TRIM3-205ENST00000527237 CFAP126Q5VTH2 177 aa12.45□□□□□ -0.42
TRIM3-205ENST00000527237 ZFP30Q9Y2G7 519 aa12.45□□□□□ -0.42
TRIM3-205ENST00000527237 GRIFINA4D1Z8 144 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms