RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 TRAV8-1A0A0A6YYK1 113 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 BORCS7-ASMTA0A0B4J1R7 106 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 IGHV3-16A0A0C4DH30 117 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 F6UZH7 168 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 NXPH4O95158 308 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 CXorf1O96002 111 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 ORM1P02763 201 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 TCRAP04437 139 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 SRIP30626 198 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 GNG5P63218 68 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 SUN5Q8TC36 379 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 TVP23CQ96ET8 276 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 ZNF479Q96JC4 524 aa7.99□□□□□ -1.13
HIF3A-209ENST00000525854 TRAV4A0A0B4J268 109 aa7.98□□□□□ -1.13
HIF3A-209ENST00000525854 FBLL1A6NHQ2 334 aaKnown RBP7.98□□□□□ -1.13
HIF3A-209ENST00000525854 GNRH2O43555 120 aa7.98□□□□□ -1.13
HIF3A-209ENST00000525854 SFTA3P0C7M3 94 aa7.98□□□□□ -1.13
HIF3A-209ENST00000525854 Q5BKY6 102 aa7.98□□□□□ -1.13
HIF3A-209ENST00000525854 LYPD5Q6UWN5 251 aa7.98□□□□□ -1.13
HIF3A-209ENST00000525854 OR4C5Q8NGB2 326 aa7.98□□□□□ -1.13
HIF3A-209ENST00000525854 TXNDC17Q9BRA2 123 aa7.98□□□□□ -1.13
HIF3A-209ENST00000525854 hCG_2014768A0A024R1R8 64 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 TRAV9-2A0A087WT02 112 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 FXYD6-FXYD2A0A087WZ82 144 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 C9JCJ5 164 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 K7EQD1 137 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 TAAR5O14804 337 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 TYMSP04818 313 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 GYPEP15421 78 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 LINC00315P59091 139 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 SUMO1P63165 101 aaKnown RBP7.97□□□□□ -1.13
HIF3A-209ENST00000525854 ZFP69Q49AA0 526 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 SH2D6Q7Z4S9 175 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 SPATA12Q7Z6I5 190 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 SH3BGRL3Q9H299 93 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 EPDR1Q9UM22 224 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 PSG8Q9UQ74 426 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 PCLOQ9Y6V0 5065 aa7.97□□□□□ -1.13
HIF3A-209ENST00000525854 A0A1W2PRE2 83 aa7.96□□□□□ -1.14
HIF3A-209ENST00000525854 RNF222A6NCQ9 220 aa7.96□□□□□ -1.14
HIF3A-209ENST00000525854 K7EP13 123 aa7.96□□□□□ -1.14
HIF3A-209ENST00000525854 CDK2AP2O75956 126 aa7.96□□□□□ -1.14
HIF3A-209ENST00000525854 PFN1P07737 140 aaKnown RBP7.96□□□□□ -1.14
HIF3A-209ENST00000525854 SAPCD1Q5SSQ6 148 aa7.96□□□□□ -1.14
HIF3A-209ENST00000525854 RPL7L1Q6DKI1 246 aaKnown RBP7.96□□□□□ -1.14
HIF3A-209ENST00000525854 CYB561D1Q8N8Q1 229 aa7.96□□□□□ -1.14
HIF3A-209ENST00000525854 OR2T35Q8NGX2 323 aa7.96□□□□□ -1.14
HIF3A-209ENST00000525854 SGK494Q96LW2 274 aa7.96□□□□□ -1.14
HIF3A-209ENST00000525854 GGTLC3B5MD39 225 aa7.95□□□□□ -1.14
HIF3A-209ENST00000525854 CIDEAO60543 219 aa7.95□□□□□ -1.14
HIF3A-209ENST00000525854 GCGP01275 180 aa7.95□□□□□ -1.14
HIF3A-209ENST00000525854 FLI1Q01543 452 aaPredicted RBP7.95□□□□□ -1.14
HIF3A-209ENST00000525854 SMUG1Q53HV7 270 aa7.95□□□□□ -1.14
HIF3A-209ENST00000525854 PRNTQ86SH4 94 aa7.95□□□□□ -1.14
HIF3A-209ENST00000525854 NFE4Q86UQ8 179 aa7.95□□□□□ -1.14
HIF3A-209ENST00000525854 TMEM75Q8N9X5 138 aa7.95□□□□□ -1.14
HIF3A-209ENST00000525854 LY96Q9Y6Y9 160 aa7.95□□□□□ -1.14
HIF3A-209ENST00000525854 CTXND1A0A1B0GTU2 59 aa7.94□□□□□ -1.14
HIF3A-209ENST00000525854 IFNA7P01567 189 aa7.94□□□□□ -1.14
HIF3A-209ENST00000525854 IGLV2-11P01706 119 aa7.94□□□□□ -1.14
HIF3A-209ENST00000525854 EVI2AP22794 236 aa7.94□□□□□ -1.14
HIF3A-209ENST00000525854 PPT1P50897 306 aa7.94□□□□□ -1.14
HIF3A-209ENST00000525854 ZNF80P51504 273 aaPredicted RBP7.94□□□□□ -1.14
HIF3A-209ENST00000525854 ZNF876PQ49A33 203 aa7.94□□□□□ -1.14
HIF3A-209ENST00000525854 AKR1C8PQ5T2L2 129 aa7.94□□□□□ -1.14
HIF3A-209ENST00000525854 NKX6-2Q9C056 277 aaPredicted RBP7.94□□□□□ -1.14
HIF3A-209ENST00000525854 RYR1P21817 5038 aa7.93□□□□□ -1.14
HIF3A-209ENST00000525854 EREGO14944 169 aa7.93□□□□□ -1.14
HIF3A-209ENST00000525854 GATA1P15976 413 aaPredicted RBP7.93□□□□□ -1.14
HIF3A-209ENST00000525854 TIRAPP58753 221 aa7.93□□□□□ -1.14
HIF3A-209ENST00000525854 Q6ZRN7 208 aaPredicted RBP7.93□□□□□ -1.14
HIF3A-209ENST00000525854 NHLRC2Q8NBF2 726 aa7.93□□□□□ -1.14
HIF3A-209ENST00000525854 PTH2Q96A98 100 aa7.93□□□□□ -1.14
HIF3A-209ENST00000525854 C11orf21Q9P2W6 132 aa7.93□□□□□ -1.14
HIF3A-209ENST00000525854 ERVFC1-1P60608 527 aa7.92□□□□□ -1.14
HIF3A-209ENST00000525854 ZNF726P1Q15940 193 aa7.92□□□□□ -1.14
HIF3A-209ENST00000525854 TCTE3Q8IZS6 198 aa7.92□□□□□ -1.14
HIF3A-209ENST00000525854 C10orf126Q8N4M7 172 aa7.92□□□□□ -1.14
HIF3A-209ENST00000525854 C9orf85Q96MD7 179 aa7.92□□□□□ -1.14
HIF3A-209ENST00000525854 PRADC1Q9BSG0 188 aa7.92□□□□□ -1.14
HIF3A-209ENST00000525854 BOLA1Q9Y3E2 137 aa7.92□□□□□ -1.14
HIF3A-209ENST00000525854 TRBV6-4A0A1B0GX49 114 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 FABP5P3A8MUU1 101 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 PEX7O00628 323 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 ARPC5O15511 151 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 RS1O15537 224 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 DNAH10OSP0CZ25 163 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 UBE2G2P60604 165 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 RHOHQ15669 191 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 CFAP126Q5VTH2 177 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 WFDC10BQ8IUB3 73 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 SLC25A29Q8N8R3 303 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 HIST1H2BAQ96A08 127 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 PGPEP1Q9NXJ5 209 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 MSRB1Q9NZV6 116 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 ARL2-SNX15V9GYD0 113 aa7.91□□□□□ -1.14
HIF3A-209ENST00000525854 TRAV8-6A0A0B4J262 113 aa7.9□□□□□ -1.14
HIF3A-209ENST00000525854 TRAV34A0A0B4J273 112 aa7.9□□□□□ -1.14
HIF3A-209ENST00000525854 LOC100131303A0A0U1RQF7 123 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 252.6 ms