RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	UBE2L6	O14933	153 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	CCL25	O15444	150 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	MRPS14	O60783	128 aa	Known RBP	2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	OR5AC1	P0C628	307 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	LYNX1	P0DP58	116 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	PTHLH	P12272	177 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	FGF7	P21781	194 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	ATP6V0C	P27449	155 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	AKR1C2	P52895	323 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	TAS2R30	P59541	319 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	CCL20	P78556	96 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	MRPS10	P82664	201 aa	Known RBP	2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	MYL5	Q02045	173 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	NNAT	Q16517	81 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	RPL22L1	Q6P5R6	122 aa	Known RBP	2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	SLC25A34	Q6PIV7	304 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	RASL11A	Q6T310	242 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	LCA10	Q71F78	164 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	AMN1	Q8IY45	258 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	OR4C16	Q8NGL9	310 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	OR4K13	Q8NH42	304 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	H1FX	Q92522	213 aa	Known RBP	2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	ZNF799	Q96GE5	643 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	TEX37	Q96LM6	180 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	SMIM3	Q9BZL3	60 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	IFI27L2	Q9H2X8	130 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	CST9L	Q9H4G1	147 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	ZNF586	Q9NXT0	402 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	ZNRD1	Q9P1U0	126 aa		2.78	□□□□□ -1.96
PCM1-223	ENST00000524356	TRAV30	A0A087WSZ9	112 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	IGKV1D-43	A0A0B4J1Z2	117 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	TRAV5	A0A0B4J249	113 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	DHRS12	A0PJE2	317 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356		M0R2Z0	102 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	BCL2L11	O43521	198 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	ZNF73	O43830	326 aa	Predicted RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	EDF1	O60869	148 aa	Known RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	ZNF324	O75467	553 aa	Predicted RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	LINC00869	P0C866	280 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	SLC25A16	P16260	332 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	HIST1H2BO	P23527	126 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	FKBP2	P26885	142 aa	Known RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	BRS3	P32247	399 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	HIST1H2BB	P33778	126 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	SRP14	P37108	136 aa	Known RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	RPS10	P46783	165 aa	Known RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	ZNF80	P51504	273 aa	Predicted RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	HIST1H2BD	P58876	126 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	HIST1H2BC	P62807	126 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	RPL30	P62888	115 aa	Known RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	SLC38A11	Q08AI6	406 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	HIST2H2BE	Q16778	126 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	RTL8B	Q17RB0	113 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	RRN3P1	Q2M238	152 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	LHFPL1	Q86WI0	220 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	DAND5	Q8N907	189 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	HIST1H2BH	Q93079	126 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	MAGOHB	Q96A72	148 aa	Known RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	BORCS8	Q96FH0	119 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	TP53RK	Q96S44	253 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	HIST1H2BN	Q99877	126 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	HIST1H2BM	Q99879	126 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	SLC25A21	Q9BQT8	299 aa	Predicted RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	NDFIP1	Q9BT67	221 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	BPESC1	Q9GZL8	116 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	TUBA4B	Q9H853	241 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	TP73-AS1	Q9UF72	201 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	NAT8B	Q9UHF3	227 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	ERG28	Q9UKR5	140 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	KLK5	Q9Y337	293 aa	Predicted RBP	2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	TMEM14A	Q9Y6G1	99 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356		V9GYS6	101 aa		2.77	□□□□□ -1.97
PCM1-223	ENST00000524356	SACS	Q9NZJ4	4579 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	HYDIN	Q4G0P3	5121 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	DNAH9	Q9NYC9	4486 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356		A0A0J9YW62	118 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356		A0A1B0GW64	132 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	CORT	O00230	105 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	PDCD5	O14737	125 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	SNAPC5	O75971	98 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	IGKV1-5	P01602	117 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	IGHV1-46	P01743	117 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	PRM2	P04554	102 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	UCHL1	P09936	223 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	NFYB	P25208	207 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	EFNA4	P52798	201 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	CDK6	Q00534	326 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	PSG7	Q13046	419 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	NEDD8	Q15843	81 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	LGALS9B	Q3B8N2	356 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	COL5A1-AS1	Q5SY13	56 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	C1orf140	Q5VVS0	124 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	LGALS9C	Q6DKI2	356 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	AMTN	Q6UX39	209 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	PP632	Q6XCG6	107 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	SSX8	Q7RTT4	187 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	PRR15	Q8IV56	129 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	PDZD9	Q8IXQ8	264 aa		2.76	□□□□□ -1.97
PCM1-223	ENST00000524356	SVBP	Q8N300	66 aa		2.76	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms