RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 MYOZ3Q8TDC0 251 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 MRAP2Q96G30 205 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 JMJD8Q96S16 334 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 HIGD1BQ9P298 99 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 IGHV4-61A0A0C4DH41 118 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 H3BUT2 72 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 OVOL1O14753 267 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 GNLYP22749 145 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 PCP4P48539 62 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 SRSF1Q07955 248 aaKnown RBP eCLIP8.41□□□□□ -1.06
HDAC9-228ENST00000524023 LY6EQ16553 131 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 ZC2HC1BQ5TFG8 222 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 GTSCR1Q86UQ5 136 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 OR10J6PQ8NGY7 276 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 TTTY13Q9BZ97 58 aa8.41□□□□□ -1.06
HDAC9-228ENST00000524023 TRAV21A0A0B4J279 112 aa8.4□□□□□ -1.06
HDAC9-228ENST00000524023 BRI3O95415 125 aa8.4□□□□□ -1.06
HDAC9-228ENST00000524023 IGHG2P01859 326 aa8.4□□□□□ -1.06
HDAC9-228ENST00000524023 IGHV4-38-2P0DP08 117 aa8.4□□□□□ -1.06
HDAC9-228ENST00000524023 OCIAD2Q56VL3 154 aa8.4□□□□□ -1.06
HDAC9-228ENST00000524023 UFSP1Q6NVU6 142 aa8.4□□□□□ -1.06
HDAC9-228ENST00000524023 USMG5Q96IX5 58 aa8.4□□□□□ -1.06
HDAC9-228ENST00000524023 PIMREGQ9BSJ6 248 aa8.4□□□□□ -1.06
HDAC9-228ENST00000524023 TMEM160Q9NX00 188 aa8.4□□□□□ -1.06
HDAC9-228ENST00000524023 MRPL35Q9NZE8 188 aaKnown RBP8.4□□□□□ -1.06
HDAC9-228ENST00000524023 A0A0G2JLM5 398 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 H3BUA1 57 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 IGHV3-11P01762 117 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 DEFB1P60022 68 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 SMIM2Q9BVW6 85 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 PRORYQ9H606 182 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 CELSR2Q9HCU4 2923 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 COL12A1Q99715 3063 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 A0A087WX48 190 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 M0R381 172 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 SPRY2O43597 315 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 HLA-DRB4P13762 266 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 RAB37Q96AX2 223 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 NAA38Q9BRA0 125 aaKnown RBP8.39□□□□□ -1.07
HDAC9-228ENST00000524023 KLK15Q9H2R5 256 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 HLA-DRB4X5D2U9 266 aa8.39□□□□□ -1.07
HDAC9-228ENST00000524023 TRBV25-1A0A075B6N4 114 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 A6NDX4 124 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 H3BUX3 64 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 S100A4P26447 101 aaKnown RBP8.38□□□□□ -1.07
HDAC9-228ENST00000524023 RNF151Q2KHN1 245 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 TM4SF20Q53R12 229 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 C10orf105Q8TEF2 133 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 FAM19A4Q96LR4 140 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 CHAC1Q9BUX1 264 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 K7EP34 96 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 GCSHP23434 173 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 ASIPP42127 132 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 RPL11P62913 178 aaKnown RBP8.38□□□□□ -1.07
HDAC9-228ENST00000524023 C21orf62-AS1Q17RA5 79 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 ANXA2RQ3ZCQ2 193 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 RASL10AQ92737 203 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 DPH3P1Q9H4G8 78 aa8.38□□□□□ -1.07
HDAC9-228ENST00000524023 F6UB75 175 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-228ENST00000524023 PF4V1P10720 104 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 FXYD2P54710 66 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 SUMO2P61956 95 aaKnown RBP8.37□□□□□ -1.07
HDAC9-228ENST00000524023 BLCAPP62952 87 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 PHLDA3Q9Y5J5 127 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 A0A1W2PPM0 123 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 SMIM13P0DJ93 91 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 MED14OSP0DP75 135 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 RNASE4P34096 147 aaKnown RBP8.37□□□□□ -1.07
HDAC9-228ENST00000524023 ORMDL2Q53FV1 153 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 Q6ZS46 218 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 LCNL1Q6ZST4 164 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 APRG1Q8IVJ8 170 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 C14orf178Q8N769 122 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-228ENST00000524023 CCL19Q99731 98 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 C20orf78Q9BR46 151 aa8.37□□□□□ -1.07
HDAC9-228ENST00000524023 IGKV3-7A0A075B6H7 116 aa8.36□□□□□ -1.07
HDAC9-228ENST00000524023 TRAV12-1A0A0B4J245 112 aa8.36□□□□□ -1.07
HDAC9-228ENST00000524023 PLNP26678 52 aa8.36□□□□□ -1.07
HDAC9-228ENST00000524023 RPL39LQ96EH5 51 aaKnown RBP8.36□□□□□ -1.07
HDAC9-228ENST00000524023 RHPN1-AS1Q9BWJ2 59 aa8.36□□□□□ -1.07
HDAC9-228ENST00000524023 CFAP46Q8IYW2 2715 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 TRBV7-9A0A0J9YWB2 115 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 NDUFS8O00217 210 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 GNRH2O43555 120 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 IGLV1-40P01703 118 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 MAPKAPK5-AS1Q8N8E1 139 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 TOMM6Q96B49 74 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 H7C1H1 209 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 RNASE3P12724 160 aaKnown RBP8.35□□□□□ -1.07
HDAC9-228ENST00000524023 SLC25A16P16260 332 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 CLEC2AQ6UVW9 174 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 CEND1Q8N111 149 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 SCGB3A1Q96QR1 104 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 TM2D2Q9BX73 214 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 SELENOKQ9Y6D0 94 aa8.35□□□□□ -1.07
HDAC9-228ENST00000524023 MUC4Q99102 2169 aa8.34□□□□□ -1.07
HDAC9-228ENST00000524023 IGHV4-30-2A0A087WSY4 118 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms