RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 MAP1LC3BQ9GZQ8 125 aa13.27□□□□□ -0.29
FBXO28-205ENST00000523990 A0A096LPF7 62 aa13.26□□□□□ -0.29
FBXO28-205ENST00000523990 IGHV3-16A0A0C4DH30 117 aa13.26□□□□□ -0.29
FBXO28-205ENST00000523990 FBLL1A6NHQ2 334 aaKnown RBP13.26□□□□□ -0.29
FBXO28-205ENST00000523990 FAM74A7A6NL05 159 aa13.26□□□□□ -0.29
FBXO28-205ENST00000523990 GNRH2O43555 120 aa13.26□□□□□ -0.29
FBXO28-205ENST00000523990 GCGP01275 180 aa13.26□□□□□ -0.29
FBXO28-205ENST00000523990 RASL10AQ92737 203 aa13.26□□□□□ -0.29
FBXO28-205ENST00000523990 KCNS1Q96KK3 526 aa13.26□□□□□ -0.29
FBXO28-205ENST00000523990 A0A0D9SG52 128 aa13.25□□□□□ -0.29
FBXO28-205ENST00000523990 BCL2L11O43521 198 aa13.25□□□□□ -0.29
FBXO28-205ENST00000523990 FHITP49789 147 aa13.25□□□□□ -0.29
FBXO28-205ENST00000523990 ESRGQ1W209 222 aa13.25□□□□□ -0.29
FBXO28-205ENST00000523990 ZFP69Q49AA0 526 aa13.25□□□□□ -0.29
FBXO28-205ENST00000523990 PRNTQ86SH4 94 aa13.25□□□□□ -0.29
FBXO28-205ENST00000523990 LINC00479Q96M42 142 aa13.25□□□□□ -0.29
FBXO28-205ENST00000523990 SDF2L1Q9HCN8 221 aa13.25□□□□□ -0.29
FBXO28-205ENST00000523990 C11orf21Q9P2W6 132 aa13.25□□□□□ -0.29
FBXO28-205ENST00000523990 NBDYA0A0U1RRE5 68 aa13.24□□□□□ -0.29
FBXO28-205ENST00000523990 FHL2Q14192 279 aa13.24□□□□□ -0.29
FBXO28-205ENST00000523990 SMUG1Q53HV7 270 aa13.24□□□□□ -0.29
FBXO28-205ENST00000523990 UPK3BQ9BT76 320 aa13.24□□□□□ -0.29
FBXO28-205ENST00000523990 NKX6-2Q9C056 277 aaPredicted RBP13.24□□□□□ -0.29
FBXO28-205ENST00000523990 PRO0255Q9UI72 69 aa13.24□□□□□ -0.29
FBXO28-205ENST00000523990 TRAV34A0A0B4J273 112 aa13.23□□□□□ -0.29
FBXO28-205ENST00000523990 A0A1B0GVY2 172 aa13.23□□□□□ -0.29
FBXO28-205ENST00000523990 KANTRA0A1W2PQU2 76 aa13.23□□□□□ -0.29
FBXO28-205ENST00000523990 PRSS29PA6NIE9 313 aa13.23□□□□□ -0.29
FBXO28-205ENST00000523990 PEX7O00628 323 aa13.23□□□□□ -0.29
FBXO28-205ENST00000523990 IFNA7P01567 189 aa13.23□□□□□ -0.29
FBXO28-205ENST00000523990 PFN1P07737 140 aaKnown RBP13.23□□□□□ -0.29
FBXO28-205ENST00000523990 SEC11BP0C7V7 166 aa13.23□□□□□ -0.29
FBXO28-205ENST00000523990 CRYBA4P53673 196 aa13.23□□□□□ -0.29
FBXO28-205ENST00000523990 ZNF479Q96JC4 524 aa13.23□□□□□ -0.29
FBXO28-205ENST00000523990 ZNF471Q9BX82 626 aaPredicted RBP13.23□□□□□ -0.29
FBXO28-205ENST00000523990 M0R2P5 195 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 PAX4O43316 350 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 SFTA3P0C7M3 94 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 SLAQ13239 276 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 SAPCD1Q5SSQ6 148 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 HIST1H2BAQ96A08 127 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 HHLA3Q9XRX5 114 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 MRPS16Q9Y3D3 137 aaKnown RBP13.22□□□□□ -0.29
FBXO28-205ENST00000523990 ARL2-SNX15V9GYD0 113 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 C1orf134Q5TEV5 83 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 Q86TA4 180 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 Q9H8V8 135 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 ICOSQ9Y6W8 199 aa13.22□□□□□ -0.29
FBXO28-205ENST00000523990 TRAV4A0A0B4J268 109 aa13.21□□□□□ -0.3
FBXO28-205ENST00000523990 UMAD1C9J7I0 102 aa13.21□□□□□ -0.3
FBXO28-205ENST00000523990 PPT1P50897 306 aa13.21□□□□□ -0.3
FBXO28-205ENST00000523990 SOHLH1Q5JUK2 328 aa13.21□□□□□ -0.3
FBXO28-205ENST00000523990 STOML3Q8TAV4 291 aa13.21□□□□□ -0.3
FBXO28-205ENST00000523990 TRGV4A0A0C4DH28 118 aa13.2□□□□□ -0.3
FBXO28-205ENST00000523990 TMUB2Q71RG4 321 aa13.19□□□□□ -0.3
FBXO28-205ENST00000523990 FAM213BQ8TBF2 198 aa13.19□□□□□ -0.3
FBXO28-205ENST00000523990 PFDN1O60925 122 aa13.18□□□□□ -0.3
FBXO28-205ENST00000523990 MBD3L1Q8WWY6 194 aa13.18□□□□□ -0.3
FBXO28-205ENST00000523990 C9orf85Q96MD7 179 aa13.18□□□□□ -0.3
FBXO28-205ENST00000523990 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
FBXO28-205ENST00000523990 KRTAP1-5Q9BYS1 174 aa13.18□□□□□ -0.3
FBXO28-205ENST00000523990 EIF5AP63241 154 aaKnown RBP13.17□□□□□ -0.3
FBXO28-205ENST00000523990 DPPA3Q6W0C5 159 aa13.17□□□□□ -0.3
FBXO28-205ENST00000523990 OR4C5Q8NGB2 326 aa13.17□□□□□ -0.3
FBXO28-205ENST00000523990 SFT2D1Q8WV19 159 aa13.17□□□□□ -0.3
FBXO28-205ENST00000523990 RNASE3P12724 160 aaKnown RBP13.16□□□□□ -0.3
FBXO28-205ENST00000523990 TPT1P13693 172 aaKnown RBP13.16□□□□□ -0.3
FBXO28-205ENST00000523990 MRPL23Q16540 153 aaKnown RBP13.16□□□□□ -0.3
FBXO28-205ENST00000523990 CST9LP1Q5W188 147 aa13.16□□□□□ -0.3
FBXO28-205ENST00000523990 TCTE3Q8IZS6 198 aa13.16□□□□□ -0.3
FBXO28-205ENST00000523990 C6orf223Q8N319 242 aa13.16□□□□□ -0.3
FBXO28-205ENST00000523990 FMC1Q96HJ9 113 aa13.16□□□□□ -0.3
FBXO28-205ENST00000523990 HERC2O95714 4834 aa13.16□□□□□ -0.3
FBXO28-205ENST00000523990 IGKV3D-20A0A0C4DH25 116 aa13.15□□□□□ -0.3
FBXO28-205ENST00000523990 K7EQD1 137 aa13.15□□□□□ -0.3
FBXO28-205ENST00000523990 PAGE4O60829 102 aa13.15□□□□□ -0.3
FBXO28-205ENST00000523990 ZNF876PQ49A33 203 aa13.15□□□□□ -0.3
FBXO28-205ENST00000523990 TTC32Q5I0X7 151 aa13.15□□□□□ -0.3
FBXO28-205ENST00000523990 COX8CQ7Z4L0 72 aa13.15□□□□□ -0.3
FBXO28-205ENST00000523990 ZC2HC1AQ96GY0 325 aa13.15□□□□□ -0.3
FBXO28-205ENST00000523990 A0A1B0GV50 99 aa13.14□□□□□ -0.31
FBXO28-205ENST00000523990 FABP5P3A8MUU1 101 aa13.14□□□□□ -0.31
FBXO28-205ENST00000523990 C9JCJ5 164 aa13.14□□□□□ -0.31
FBXO28-205ENST00000523990 UBE2G1P62253 170 aa13.14□□□□□ -0.31
FBXO28-205ENST00000523990 ZFP30Q9Y2G7 519 aa13.14□□□□□ -0.31
FBXO28-205ENST00000523990 KIAA1109Q2LD37 5005 aa13.14□□□□□ -0.31
FBXO28-205ENST00000523990 TRBV6-1A0A0K0K1D8 114 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 ORM1P02763 201 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 GYPEP15421 78 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 CRIP1P50238 77 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 Q6ZNX1 250 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 A0A1W2PPQ1 181 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 LTAP01374 205 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 H2AFB1P0C5Y9 115 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 GATA1P15976 413 aaPredicted RBP13.13□□□□□ -0.31
FBXO28-205ENST00000523990 SRIP30626 198 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 LGALSLQ3ZCW2 172 aaPredicted RBP13.13□□□□□ -0.31
FBXO28-205ENST00000523990 ZNF506Q5JVG8 444 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 CFAP126Q5VTH2 177 aa13.13□□□□□ -0.31
FBXO28-205ENST00000523990 LYPD5Q6UWN5 251 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms