RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-222	ENST00000523555	ZNF471	Q9BX82	626 aa	Predicted RBP	6.6	□□□□□ -1.35
PABPC1-222	ENST00000523555	MAP1LC3B	Q9GZQ8	125 aa		6.6	□□□□□ -1.35
PABPC1-222	ENST00000523555		A0A096LPF7	62 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555	TRAV21	A0A0B4J279	112 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555		A0A1B0GV50	99 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555	GCG	P01275	180 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555	FHL2	Q14192	279 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555	ESRG	Q1W209	222 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555	LGALS9B	Q3B8N2	356 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555	TMUB2	Q71RG4	321 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555	ZNF479	Q96JC4	524 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555	ATG101	Q9BSB4	218 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555	ARL2-SNX15	V9GYD0	113 aa		6.59	□□□□□ -1.35
PABPC1-222	ENST00000523555	TRGV11	A0A075B6L2	103 aa		6.58	□□□□□ -1.36
PABPC1-222	ENST00000523555		A0A0D9SG52	128 aa		6.58	□□□□□ -1.36
PABPC1-222	ENST00000523555	SERTM2	A0A1B0GWG4	89 aa		6.58	□□□□□ -1.36
PABPC1-222	ENST00000523555	KANTR	A0A1W2PQU2	76 aa		6.58	□□□□□ -1.36
PABPC1-222	ENST00000523555	PEX7	O00628	323 aa		6.58	□□□□□ -1.36
PABPC1-222	ENST00000523555	SEC11B	P0C7V7	166 aa		6.58	□□□□□ -1.36
PABPC1-222	ENST00000523555	LGALSL	Q3ZCW2	172 aa	Predicted RBP	6.58	□□□□□ -1.36
PABPC1-222	ENST00000523555		Q6ZNX1	250 aa		6.58	□□□□□ -1.36
PABPC1-222	ENST00000523555	FAM213B	Q8TBF2	198 aa		6.58	□□□□□ -1.36
PABPC1-222	ENST00000523555	LRP1B	Q9NZR2	4599 aa		6.58	□□□□□ -1.36
PABPC1-222	ENST00000523555	KIAA1109	Q2LD37	5005 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	HERC2	O95714	4834 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	hCG_2014768	A0A024R1R8	64 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	IGKV3D-20	A0A0C4DH25	116 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555		A0A1B0GVY2	172 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	IFNA7	P01567	189 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	CRIP1	P50238	77 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	CRYBA4	P53673	196 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	CCL18	P55774	89 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	SMUG1	Q53HV7	270 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	LCE2D	Q5TA82	110 aa	Predicted RBP	6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	DPPA3	Q6W0C5	159 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555		Q86TA4	180 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	RASL10A	Q92737	203 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	NDFIP1	Q9BT67	221 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555	KRTAP1-5	Q9BYS1	174 aa		6.57	□□□□□ -1.36
PABPC1-222	ENST00000523555		H3BNG1	76 aa		6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555		K7EQM0	130 aa		6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555	PAX4	O43316	350 aa		6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555	PAGE4	O60829	102 aa		6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555	PFN1	P07737	140 aa	Known RBP	6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555	RNASE3	P12724	160 aa	Known RBP	6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555	TCTE3	Q8IZS6	198 aa		6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555	MBD3L1	Q8WWY6	194 aa		6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555	ZC2HC1A	Q96GY0	325 aa		6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555	SPX	Q9BT56	116 aa		6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555	SDF2L1	Q9HCN8	221 aa		6.56	□□□□□ -1.36
PABPC1-222	ENST00000523555	TRAV4	A0A0B4J268	109 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	LOC100131303	A0A0U1RQF7	123 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	NBDY	A0A0U1RRE5	68 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	PGPEP1L	A6NFU8	196 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	PRSS29P	A6NIE9	313 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555		C9JCJ5	164 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555		M0R2P5	195 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	PFDN1	O60925	122 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	FAM3B	P58499	235 aa	Predicted RBP	6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	CCL20	P78556	96 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	CST9LP1	Q5W188	147 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	ZNF575	Q86XF7	245 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	STOML3	Q8TAV4	291 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	SFT2D1	Q8WV19	159 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	HIST1H2BA	Q96A08	127 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	KCNS1	Q96KK3	526 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	C9orf85	Q96MD7	179 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	PRO0255	Q9UI72	69 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	HHLA3	Q9XRX5	114 aa		6.55	□□□□□ -1.36
PABPC1-222	ENST00000523555	TRGV4	A0A0C4DH28	118 aa		6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555	SCO2	A0A1W2PP80	73 aa		6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555	UMAD1	C9J7I0	102 aa		6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555		K7EQD1	137 aa		6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555	TPT1	P13693	172 aa	Known RBP	6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555	ZFP69	Q49AA0	526 aa		6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555	SAPCD1	Q5SSQ6	148 aa		6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555	LINC00336	Q6ZUF6	198 aa		6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555	NHLRC2	Q8NBF2	726 aa		6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555	UPK3B	Q9BT76	320 aa		6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555		Q9H8V8	135 aa		6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555	MRPS16	Q9Y3D3	137 aa	Known RBP	6.54	□□□□□ -1.36
PABPC1-222	ENST00000523555	IGHV3-73	A0A0B4J1V6	119 aa		6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555		A0A1B0GVG6	124 aa		6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	FBLL1	A6NHQ2	334 aa	Known RBP	6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	SH2D1A	O60880	128 aa		6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	C1QB	P02746	253 aa		6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	H2AFB1	P0C5Y9	115 aa		6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	ZNF876P	Q49A33	203 aa		6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	ZNF506	Q5JVG8	444 aa		6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	C1orf134	Q5TEV5	83 aa		6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	OR4C5	Q8NGB2	326 aa		6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	NKX6-2	Q9C056	277 aa	Predicted RBP	6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	ICOS	Q9Y6W8	199 aa		6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	APOB	P04114	4563 aa	Known RBP	6.53	□□□□□ -1.36
PABPC1-222	ENST00000523555	HSPG2	P98160	4391 aa		6.52	□□□□□ -1.37
PABPC1-222	ENST00000523555	GRIFIN	A4D1Z8	144 aa		6.52	□□□□□ -1.37
PABPC1-222	ENST00000523555	FABP5P3	A8MUU1	101 aa		6.52	□□□□□ -1.37
PABPC1-222	ENST00000523555	KRBOX1	C9JBD0	128 aa		6.52	□□□□□ -1.37
PABPC1-222	ENST00000523555		M0R036	132 aa		6.52	□□□□□ -1.37
PABPC1-222	ENST00000523555	RS1	O15537	224 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms