RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 RAB37Q96AX2 223 aa13.59□□□□□ -0.23
IKBKB-228ENST00000523517 TMEM160Q9NX00 188 aa13.59□□□□□ -0.23
IKBKB-228ENST00000523517 MRPL35Q9NZE8 188 aaKnown RBP13.59□□□□□ -0.23
IKBKB-228ENST00000523517 SOCS3O14543 225 aa13.58□□□□□ -0.24
IKBKB-228ENST00000523517 OVOL1O14753 267 aa13.58□□□□□ -0.24
IKBKB-228ENST00000523517 MEGF9Q9H1U4 602 aa13.58□□□□□ -0.24
IKBKB-228ENST00000523517 TRAV40A0A0B4J280 105 aa13.58□□□□□ -0.24
IKBKB-228ENST00000523517 TM4SF20Q53R12 229 aa13.58□□□□□ -0.24
IKBKB-228ENST00000523517 TRAV21A0A0B4J279 112 aa13.57□□□□□ -0.24
IKBKB-228ENST00000523517 K7EP34 96 aa13.57□□□□□ -0.24
IKBKB-228ENST00000523517 CHAC1Q9BUX1 264 aa13.57□□□□□ -0.24
IKBKB-228ENST00000523517 A0A087WX48 190 aa13.57□□□□□ -0.24
IKBKB-228ENST00000523517 GCSHP23434 173 aa13.57□□□□□ -0.24
IKBKB-228ENST00000523517 SMIM2Q9BVW6 85 aa13.57□□□□□ -0.24
IKBKB-228ENST00000523517 ASH1LQ9NR48 2969 aaKnown RBP13.56□□□□□ -0.24
IKBKB-228ENST00000523517 HLA-DRB4P13762 266 aa13.56□□□□□ -0.24
IKBKB-228ENST00000523517 HLA-DRB4X5D2U9 266 aa13.56□□□□□ -0.24
IKBKB-228ENST00000523517 TRBV25-1A0A075B6N4 114 aa13.56□□□□□ -0.24
IKBKB-228ENST00000523517 M0R381 172 aa13.56□□□□□ -0.24
IKBKB-228ENST00000523517 DEFB1P60022 68 aa13.56□□□□□ -0.24
IKBKB-228ENST00000523517 USMG5Q96IX5 58 aa13.56□□□□□ -0.24
IKBKB-228ENST00000523517 IGHV4-61A0A0C4DH41 118 aa13.55□□□□□ -0.24
IKBKB-228ENST00000523517 SPRY2O43597 315 aa13.55□□□□□ -0.24
IKBKB-228ENST00000523517 BRI3O95415 125 aa13.55□□□□□ -0.24
IKBKB-228ENST00000523517 SMIM13P0DJ93 91 aa13.55□□□□□ -0.24
IKBKB-228ENST00000523517 FXYD2P54710 66 aa13.55□□□□□ -0.24
IKBKB-228ENST00000523517 LY6EQ16553 131 aa13.55□□□□□ -0.24
IKBKB-228ENST00000523517 CACNA1BQ00975 2339 aa13.55□□□□□ -0.24
IKBKB-228ENST00000523517 COL6A6A6NMZ7 2263 aa13.55□□□□□ -0.24
IKBKB-228ENST00000523517 A0A1W2PPM0 123 aa13.54□□□□□ -0.24
IKBKB-228ENST00000523517 IGHV3-11P01762 117 aa13.54□□□□□ -0.24
IKBKB-228ENST00000523517 S100A4P26447 101 aaKnown RBP13.54□□□□□ -0.24
IKBKB-228ENST00000523517 ASIPP42127 132 aa13.54□□□□□ -0.24
IKBKB-228ENST00000523517 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.54□□□□□ -0.24
IKBKB-228ENST00000523517 H3BUA1 57 aa13.54□□□□□ -0.24
IKBKB-228ENST00000523517 IGHG2P01859 326 aa13.54□□□□□ -0.24
IKBKB-228ENST00000523517 GNLYP22749 145 aa13.54□□□□□ -0.24
IKBKB-228ENST00000523517 FAM19A4Q96LR4 140 aa13.54□□□□□ -0.24
IKBKB-228ENST00000523517 IGHV4-38-2P0DP08 117 aa13.53□□□□□ -0.24
IKBKB-228ENST00000523517 RPL11P62913 178 aaKnown RBP13.53□□□□□ -0.24
IKBKB-228ENST00000523517 ANXA2RQ3ZCQ2 193 aa13.53□□□□□ -0.24
IKBKB-228ENST00000523517 PIMREGQ9BSJ6 248 aa13.53□□□□□ -0.24
IKBKB-228ENST00000523517 KLK15Q9H2R5 256 aa13.53□□□□□ -0.24
IKBKB-228ENST00000523517 PLNP26678 52 aa13.53□□□□□ -0.24
IKBKB-228ENST00000523517 SUMO2P61956 95 aaKnown RBP13.53□□□□□ -0.24
IKBKB-228ENST00000523517 RASL10AQ92737 203 aa13.53□□□□□ -0.24
IKBKB-228ENST00000523517 C20orf78Q9BR46 151 aa13.53□□□□□ -0.24
IKBKB-228ENST00000523517 DPH3P1Q9H4G8 78 aa13.53□□□□□ -0.24
IKBKB-228ENST00000523517 PHLDA3Q9Y5J5 127 aa13.53□□□□□ -0.24
IKBKB-228ENST00000523517 K7ERU9 68 aa13.52□□□□□ -0.24
IKBKB-228ENST00000523517 RNASE4P34096 147 aaKnown RBP13.52□□□□□ -0.24
IKBKB-228ENST00000523517 ORMDL2Q53FV1 153 aa13.52□□□□□ -0.24
IKBKB-228ENST00000523517 MAPKAPK5-AS1Q8N8E1 139 aa13.52□□□□□ -0.24
IKBKB-228ENST00000523517 VPS25Q9BRG1 176 aa13.52□□□□□ -0.24
IKBKB-228ENST00000523517 SPTBN1Q01082 2364 aaKnown RBP13.52□□□□□ -0.25
IKBKB-228ENST00000523517 TRAV12-1A0A0B4J245 112 aa13.52□□□□□ -0.25
IKBKB-228ENST00000523517 A6NDX4 124 aa13.52□□□□□ -0.25
IKBKB-228ENST00000523517 C14orf178Q8N769 122 aaPredicted RBP13.52□□□□□ -0.25
IKBKB-228ENST00000523517 SPCS1Q9Y6A9 102 aa13.52□□□□□ -0.25
IKBKB-228ENST00000523517 F6UB75 175 aa13.51□□□□□ -0.25
IKBKB-228ENST00000523517 H3BUX3 64 aa13.51□□□□□ -0.25
IKBKB-228ENST00000523517 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
IKBKB-228ENST00000523517 PF4V1P10720 104 aa13.51□□□□□ -0.25
IKBKB-228ENST00000523517 TM2D2Q9BX73 214 aa13.51□□□□□ -0.25
IKBKB-228ENST00000523517 SELENOKQ9Y6D0 94 aa13.51□□□□□ -0.25
IKBKB-228ENST00000523517 H7C1H1 209 aa13.51□□□□□ -0.25
IKBKB-228ENST00000523517 SAMD5Q5TGI4 173 aa13.51□□□□□ -0.25
IKBKB-228ENST00000523517 APRG1Q8IVJ8 170 aa13.51□□□□□ -0.25
IKBKB-228ENST00000523517 TOMM6Q96B49 74 aa13.51□□□□□ -0.25
IKBKB-228ENST00000523517 RPL39LQ96EH5 51 aaKnown RBP13.51□□□□□ -0.25
IKBKB-228ENST00000523517 FABP2P12104 132 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 CEND1Q8N111 149 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 SCGB3A1Q96QR1 104 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 RHPN1-AS1Q9BWJ2 59 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 IGKV3-7A0A075B6H7 116 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 F8VRH5 84 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 GNRH2O43555 120 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 SLC25A16P16260 332 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 BLCAPP62952 87 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 OR5A1Q8NGJ0 315 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 C10orf105Q8TEF2 133 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 PRORYQ9H606 182 aa13.5□□□□□ -0.25
IKBKB-228ENST00000523517 HIVEP3Q5T1R4 2406 aa13.49□□□□□ -0.25
IKBKB-228ENST00000523517 TRBV7-9A0A0J9YWB2 115 aa13.49□□□□□ -0.25
IKBKB-228ENST00000523517 K7EMI3 77 aa13.49□□□□□ -0.25
IKBKB-228ENST00000523517 K7ERJ3 54 aa13.49□□□□□ -0.25
IKBKB-228ENST00000523517 MGPP08493 103 aa13.49□□□□□ -0.25
IKBKB-228ENST00000523517 Q6ZS46 218 aa13.49□□□□□ -0.25
IKBKB-228ENST00000523517 LCNL1Q6ZST4 164 aa13.49□□□□□ -0.25
IKBKB-228ENST00000523517 PHLDA1Q8WV24 401 aaPredicted RBP13.49□□□□□ -0.25
IKBKB-228ENST00000523517 SPOCK3Q9BQ16 436 aa13.49□□□□□ -0.25
IKBKB-228ENST00000523517 RNF223E7ERA6 249 aa13.48□□□□□ -0.25
IKBKB-228ENST00000523517 SAP30O75446 220 aa13.48□□□□□ -0.25
IKBKB-228ENST00000523517 RNASE3P12724 160 aaKnown RBP13.48□□□□□ -0.25
IKBKB-228ENST00000523517 CHTOPQ9Y3Y2 248 aaKnown RBP13.48□□□□□ -0.25
IKBKB-228ENST00000523517 CCL19Q99731 98 aa13.47□□□□□ -0.25
IKBKB-228ENST00000523517 IGLV1-40P01703 118 aa13.47□□□□□ -0.25
IKBKB-228ENST00000523517 NEXN-AS1Q8NBZ9 246 aa13.47□□□□□ -0.25
IKBKB-228ENST00000523517 TAL2Q16559 108 aa13.46□□□□□ -0.25
IKBKB-228ENST00000523517 DAZ1Q9NQZ3 744 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms