RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 DMBT1Q9UGM3 2413 aaPredicted RBP6.44□□□□□ -1.38
SDC2-207ENST00000522911 TRBV19A0A075B6N1 114 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 A0A087WWC5 75 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 TRAV12-3A0A0B4J271 114 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 C7orf71A4D174 169 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 C5orf52A6NGY3 159 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 PCP4L1A6NKN8 68 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 IFNA5P01569 189 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 RAB5AP20339 215 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 TCL1AP56279 114 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 AKR1C8PQ5T2L2 129 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 C9orf47Q6ZRZ4 202 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 NFE4Q86UQ8 179 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 OR10G4Q8NGN3 311 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 HIST1H2BAQ96A08 127 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 VGLL1Q99990 258 aa6.43□□□□□ -1.38
SDC2-207ENST00000522911 PARD6GQ9BYG4 376 aaPredicted RBP6.43□□□□□ -1.38
SDC2-207ENST00000522911 LYRM2Q9NU23 88 aaPredicted RBP6.43□□□□□ -1.38
SDC2-207ENST00000522911 TRGV2A0A075B6R0 118 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 TRAV1-1A0A0B4J248 108 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 RBFOX3A6NFN3 312 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 EPM2AB3EWF7 344 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 EREGO14944 169 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 NDUFS6O75380 124 aaKnown RBP6.42□□□□□ -1.38
SDC2-207ENST00000522911 HIST1H1EP10412 219 aaKnown RBP6.42□□□□□ -1.38
SDC2-207ENST00000522911 S100PP25815 95 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 TAGLN2P37802 199 aaKnown RBP6.42□□□□□ -1.38
SDC2-207ENST00000522911 ERVFC1-1P60608 527 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 PNRC1Q12796 327 aaPredicted RBP6.42□□□□□ -1.38
SDC2-207ENST00000522911 STX12Q86Y82 276 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 LYPD1Q8N2G4 141 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 TMEM252Q8N6L7 170 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 OR2G3Q8NGZ4 309 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 FAM213BQ8TBF2 198 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 GSN-AS1Q9NRJ2 163 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 PRO0255Q9UI72 69 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 TP53TG3Q9ULZ0 132 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 FUT9Q9Y231 359 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 ICOSQ9Y6W8 199 aa6.42□□□□□ -1.38
SDC2-207ENST00000522911 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
SDC2-207ENST00000522911 MPDU1O75352 247 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 NDUFB4O95168 129 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 SULT1A1P50225 295 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 XGP55808 180 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 SNRPEP62304 92 aaKnown RBP6.41□□□□□ -1.38
SDC2-207ENST00000522911 KHDC3LQ587J8 217 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 ZNF506Q5JVG8 444 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 MIC13Q5XKP0 118 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 HSD17B11Q8NBQ5 300 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 SCGB1C1Q8TD33 95 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 ATP5SQ99766 215 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 AGPAT4-IT1Q9H0P7 198 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 WFDC1Q9HC57 220 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 SLC39A9Q9NUM3 307 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 KLF12Q9Y4X4 402 aa6.41□□□□□ -1.38
SDC2-207ENST00000522911 DNAH8Q96JB1 4490 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 TRAV9-2A0A087WT02 112 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 TRGV1A0A0A0MS02 117 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 C9JQL5 133 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 H3BTX0 84 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 M0R3E3 92 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 PAX4O43316 350 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 EIF3GO75821 320 aaKnown RBP eCLIP6.4□□□□□ -1.38
SDC2-207ENST00000522911 NXPH4O95158 308 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 IFNA1P01562 189 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 SNRPCP09234 159 aaKnown RBP6.4□□□□□ -1.38
SDC2-207ENST00000522911 ATP6V0CP27449 155 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 CRYBA4P53673 196 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 HBG1P69891 147 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 HBG2P69892 147 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 NHLH2Q02577 135 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 MRPL23Q16540 153 aaKnown RBP6.4□□□□□ -1.38
SDC2-207ENST00000522911 ATP6V1FQ16864 119 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 ZFAND2AQ8N6M9 145 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 TVP23CQ96ET8 276 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 OR51M1Q9H341 326 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 TMEM242Q9NWH2 141 aa6.4□□□□□ -1.38
SDC2-207ENST00000522911 TRAV5A0A0B4J249 113 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 FAM24AA6NFZ4 105 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 PRB4P10163 310 aaPredicted RBP6.39□□□□□ -1.39
SDC2-207ENST00000522911 SERF2P84101 59 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 FHL2Q14192 279 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 DNLZQ5SXM8 178 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 LYPD5Q6UWN5 251 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 NEGR1Q7Z3B1 354 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 ZFP82Q8N141 532 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 OR5C1Q8NGR4 320 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 PSMG3Q9BT73 122 aaPredicted RBP6.39□□□□□ -1.39
SDC2-207ENST00000522911 MRPL32Q9BYC8 188 aaKnown RBP6.39□□□□□ -1.39
SDC2-207ENST00000522911 CTDSP1Q9GZU7 261 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 HHLA3Q9XRX5 114 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 LENEPQ9Y5L5 61 aa6.39□□□□□ -1.39
SDC2-207ENST00000522911 IGHV1OR15-1A0A075B7D0 117 aa6.38□□□□□ -1.39
SDC2-207ENST00000522911 A0A087WTM6 91 aa6.38□□□□□ -1.39
SDC2-207ENST00000522911 IGSF23A1L1A6 192 aa6.38□□□□□ -1.39
SDC2-207ENST00000522911 RBAKDNA6NC62 111 aa6.38□□□□□ -1.39
SDC2-207ENST00000522911 CST7O76096 145 aa6.38□□□□□ -1.39
SDC2-207ENST00000522911 GPX1P07203 203 aa6.38□□□□□ -1.39
SDC2-207ENST00000522911 SRP19P09132 144 aaKnown RBP6.38□□□□□ -1.39
SDC2-207ENST00000522911 DNAH10OSP0CZ25 163 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms