RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ARL2-SNX15V9GYD0 113 aa12.46□□□□□ -0.41
CLK4-211ENST00000522556 IGHV3-16A0A0C4DH30 117 aa12.45□□□□□ -0.42
CLK4-211ENST00000522556 UMAD1C9J7I0 102 aa12.45□□□□□ -0.42
CLK4-211ENST00000522556 K7EQM0 130 aa12.45□□□□□ -0.42
CLK4-211ENST00000522556 PAGE4O60829 102 aa12.45□□□□□ -0.42
CLK4-211ENST00000522556 AKAP14Q86UN6 197 aa12.45□□□□□ -0.42
CLK4-211ENST00000522556 UBE2DNLQ8IWF7 75 aa12.45□□□□□ -0.42
CLK4-211ENST00000522556 C15orf53Q8NAA6 179 aa12.45□□□□□ -0.42
CLK4-211ENST00000522556 NDFIP1Q9BT67 221 aa12.45□□□□□ -0.42
CLK4-211ENST00000522556 IGLV2-18A0A075B6J9 118 aa12.44□□□□□ -0.42
CLK4-211ENST00000522556 M0R2N4 97 aa12.44□□□□□ -0.42
CLK4-211ENST00000522556 CST9LP1Q5W188 147 aa12.44□□□□□ -0.42
CLK4-211ENST00000522556 VSIG2Q96IQ7 327 aa12.44□□□□□ -0.42
CLK4-211ENST00000522556 C18orf15Q96N68 181 aa12.44□□□□□ -0.42
CLK4-211ENST00000522556 TRGV11A0A075B6L2 103 aa12.43□□□□□ -0.42
CLK4-211ENST00000522556 SFTA3P0C7M3 94 aa12.43□□□□□ -0.42
CLK4-211ENST00000522556 CCL20P78556 96 aa12.43□□□□□ -0.42
CLK4-211ENST00000522556 C9orf62Q8N4C0 152 aa12.43□□□□□ -0.42
CLK4-211ENST00000522556 H2AFB1P0C5Y9 115 aa12.42□□□□□ -0.42
CLK4-211ENST00000522556 EIF5AP63241 154 aaKnown RBP12.42□□□□□ -0.42
CLK4-211ENST00000522556 SMUG1Q53HV7 270 aa12.42□□□□□ -0.42
CLK4-211ENST00000522556 DNAH10Q8IVF4 4471 aa12.41□□□□□ -0.42
CLK4-211ENST00000522556 SCO2A0A1W2PP80 73 aa12.41□□□□□ -0.42
CLK4-211ENST00000522556 PFN1P07737 140 aaKnown RBP12.41□□□□□ -0.42
CLK4-211ENST00000522556 CRIP1P50238 77 aa12.41□□□□□ -0.42
CLK4-211ENST00000522556 LGALS9BQ3B8N2 356 aa12.41□□□□□ -0.42
CLK4-211ENST00000522556 DPPA3Q6W0C5 159 aa12.41□□□□□ -0.42
CLK4-211ENST00000522556 HIST1H2BAQ96A08 127 aa12.41□□□□□ -0.42
CLK4-211ENST00000522556 ZC2HC1AQ96GY0 325 aa12.41□□□□□ -0.42
CLK4-211ENST00000522556 ZNF479Q96JC4 524 aa12.41□□□□□ -0.42
CLK4-211ENST00000522556 SDF2L1Q9HCN8 221 aa12.41□□□□□ -0.42
CLK4-211ENST00000522556 FRAS1Q86XX4 4008 aa12.4□□□□□ -0.42
CLK4-211ENST00000522556 NKX6-2Q9C056 277 aaPredicted RBP12.4□□□□□ -0.42
CLK4-211ENST00000522556 LINC00588Q9Y4M8 146 aa12.4□□□□□ -0.42
CLK4-211ENST00000522556 IGKV3D-20A0A0C4DH25 116 aa12.39□□□□□ -0.43
CLK4-211ENST00000522556 NKX2-5P52952 324 aaPredicted RBP12.39□□□□□ -0.43
CLK4-211ENST00000522556 FHL2Q14192 279 aa12.39□□□□□ -0.43
CLK4-211ENST00000522556 ZFP69Q49AA0 526 aa12.39□□□□□ -0.43
CLK4-211ENST00000522556 SAPCD1Q5SSQ6 148 aa12.39□□□□□ -0.43
CLK4-211ENST00000522556 NHLRC2Q8NBF2 726 aa12.39□□□□□ -0.43
CLK4-211ENST00000522556 RASL10AQ92737 203 aa12.39□□□□□ -0.43
CLK4-211ENST00000522556 SPXQ9BT56 116 aa12.39□□□□□ -0.43
CLK4-211ENST00000522556 A0A096LPF7 62 aa12.38□□□□□ -0.43
CLK4-211ENST00000522556 FBLL1A6NHQ2 334 aaKnown RBP12.38□□□□□ -0.43
CLK4-211ENST00000522556 RNASE3P12724 160 aaKnown RBP12.38□□□□□ -0.43
CLK4-211ENST00000522556 AKR1C3P42330 323 aa12.38□□□□□ -0.43
CLK4-211ENST00000522556 SULT1A2P50226 295 aa12.38□□□□□ -0.43
CLK4-211ENST00000522556 PPT1P50897 306 aa12.38□□□□□ -0.43
CLK4-211ENST00000522556 RNF212Q495C1 297 aa12.38□□□□□ -0.43
CLK4-211ENST00000522556 C9orf85Q96MD7 179 aa12.38□□□□□ -0.43
CLK4-211ENST00000522556 M0R2P5 195 aa12.37□□□□□ -0.43
CLK4-211ENST00000522556 LTAP01374 205 aa12.37□□□□□ -0.43
CLK4-211ENST00000522556 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
CLK4-211ENST00000522556 ZNRF2Q8NHG8 242 aa12.37□□□□□ -0.43
CLK4-211ENST00000522556 FMC1Q96HJ9 113 aa12.37□□□□□ -0.43
CLK4-211ENST00000522556 KCNS1Q96KK3 526 aa12.37□□□□□ -0.43
CLK4-211ENST00000522556 GNG13Q9P2W3 67 aa12.37□□□□□ -0.43
CLK4-211ENST00000522556 C9JCJ5 164 aa12.36□□□□□ -0.43
CLK4-211ENST00000522556 SH2D1AO60880 128 aa12.36□□□□□ -0.43
CLK4-211ENST00000522556 CRYBA4P53673 196 aa12.36□□□□□ -0.43
CLK4-211ENST00000522556 UBE2G1P62253 170 aa12.36□□□□□ -0.43
CLK4-211ENST00000522556 ESRGQ1W209 222 aa12.36□□□□□ -0.43
CLK4-211ENST00000522556 Q6ZR54 194 aa12.36□□□□□ -0.43
CLK4-211ENST00000522556 H3BNG1 76 aa12.35□□□□□ -0.43
CLK4-211ENST00000522556 M0R036 132 aa12.35□□□□□ -0.43
CLK4-211ENST00000522556 ZNF575Q86XF7 245 aa12.35□□□□□ -0.43
CLK4-211ENST00000522556 BOLA1Q9Y3E2 137 aa12.35□□□□□ -0.43
CLK4-211ENST00000522556 TRAV1-1A0A0B4J248 108 aa12.34□□□□□ -0.43
CLK4-211ENST00000522556 TRAV4A0A0B4J268 109 aa12.34□□□□□ -0.43
CLK4-211ENST00000522556 TRBV6-1A0A0K0K1D8 114 aa12.34□□□□□ -0.43
CLK4-211ENST00000522556 PGPEP1LA6NFU8 196 aa12.34□□□□□ -0.43
CLK4-211ENST00000522556 PAX4O43316 350 aa12.34□□□□□ -0.43
CLK4-211ENST00000522556 COX8CQ7Z4L0 72 aa12.34□□□□□ -0.43
CLK4-211ENST00000522556 TCEAL7Q9BRU2 100 aa12.34□□□□□ -0.43
CLK4-211ENST00000522556 DERL1Q9BUN8 251 aa12.34□□□□□ -0.43
CLK4-211ENST00000522556 TRGV4A0A0C4DH28 118 aa12.33□□□□□ -0.44
CLK4-211ENST00000522556 LOC100131303A0A0U1RQF7 123 aa12.33□□□□□ -0.44
CLK4-211ENST00000522556 FABP5P3A8MUU1 101 aa12.33□□□□□ -0.44
CLK4-211ENST00000522556 RTL8CO15255 209 aa12.33□□□□□ -0.44
CLK4-211ENST00000522556 RAB5CP51148 216 aa12.33□□□□□ -0.44
CLK4-211ENST00000522556 CCL18P55774 89 aa12.33□□□□□ -0.44
CLK4-211ENST00000522556 ZNF506Q5JVG8 444 aa12.33□□□□□ -0.44
CLK4-211ENST00000522556 EIF5AL1Q6IS14 154 aaKnown RBP12.33□□□□□ -0.44
CLK4-211ENST00000522556 PRO0255Q9UI72 69 aa12.33□□□□□ -0.44
CLK4-211ENST00000522556 HHLA3Q9XRX5 114 aa12.33□□□□□ -0.44
CLK4-211ENST00000522556 ZFP30Q9Y2G7 519 aa12.33□□□□□ -0.44
CLK4-211ENST00000522556 BIRC6Q9NR09 4857 aa12.32□□□□□ -0.44
CLK4-211ENST00000522556 TMSB15BA0A087X1C1 80 aa12.32□□□□□ -0.44
CLK4-211ENST00000522556 GRIFINA4D1Z8 144 aa12.32□□□□□ -0.44
CLK4-211ENST00000522556 KRBOX1C9JBD0 128 aa12.32□□□□□ -0.44
CLK4-211ENST00000522556 ORM1P02763 201 aa12.32□□□□□ -0.44
CLK4-211ENST00000522556 ZNF674Q2M3X9 581 aa12.32□□□□□ -0.44
CLK4-211ENST00000522556 ZNF876PQ49A33 203 aa12.32□□□□□ -0.44
CLK4-211ENST00000522556 ALKAL2Q6UX46 152 aa12.32□□□□□ -0.44
CLK4-211ENST00000522556 OR4C5Q8NGB2 326 aa12.32□□□□□ -0.44
CLK4-211ENST00000522556 DNAH2Q9P225 4427 aa12.32□□□□□ -0.44
CLK4-211ENST00000522556 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
CLK4-211ENST00000522556 B4DEV8 164 aa12.31□□□□□ -0.44
CLK4-211ENST00000522556 H3BVH4 76 aa12.31□□□□□ -0.44
CLK4-211ENST00000522556 KRTAP1-5Q9BYS1 174 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms