RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 GSN-AS1Q9NRJ2 163 aa6.64□□□□□ -1.35
CLK4-209ENST00000521621 VPS13DQ5THJ4 4388 aa6.64□□□□□ -1.35
CLK4-209ENST00000521621 TRAV8-1A0A0A6YYK1 113 aa6.64□□□□□ -1.35
CLK4-209ENST00000521621 FABP5P3A8MUU1 101 aa6.64□□□□□ -1.35
CLK4-209ENST00000521621 IFNA7P01567 189 aa6.64□□□□□ -1.35
CLK4-209ENST00000521621 MED14OSP0DP75 135 aa6.64□□□□□ -1.35
CLK4-209ENST00000521621 ZNF674Q2M3X9 581 aa6.64□□□□□ -1.35
CLK4-209ENST00000521621 MLST8Q9BVC4 326 aa6.64□□□□□ -1.35
CLK4-209ENST00000521621 IFNA1P01562 189 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 PRM2P04554 102 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 TYMSP04818 313 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 POM121L12Q8N7R1 296 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 M0R2P5 195 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 PDE6DO43924 150 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 PAGE4O60829 102 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 ZNF80P51504 273 aaPredicted RBP6.63□□□□□ -1.35
CLK4-209ENST00000521621 BLOC1S1P78537 153 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 LINC01559Q495D7 138 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 TMEM88Q6PEY1 159 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 TRAV4A0A0B4J268 109 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 PRNTQ86SH4 94 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 C8orf49Q96NF6 230 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 UPK3BQ9BT76 320 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 RPH3ALQ9UNE2 315 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 BOLA1Q9Y3E2 137 aa6.63□□□□□ -1.35
CLK4-209ENST00000521621 GCGP01275 180 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 DEFB130BP0DP73 79 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 DEFB130AP0DP74 79 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 UBE2G2P60604 165 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 UBE2G1P62253 170 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 Q6ZTI0 123 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 ZNF767PQ75MW2 155 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 J3KRW8 73 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 AKR1C3P42330 323 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 FAM162BQ5T6X4 162 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 SCRT2Q9NQ03 307 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 C11orf21Q9P2W6 132 aa6.62□□□□□ -1.35
CLK4-209ENST00000521621 KRBOX1C9JBD0 128 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 PRB4P10163 310 aaPredicted RBP6.61□□□□□ -1.35
CLK4-209ENST00000521621 HOXA5P20719 270 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 Q6ZQT7 251 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 IL36BQ9NZH7 164 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 MDFICQ9P1T7 246 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 RYR3Q15413 4870 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 GAGE12BA1L429 117 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 RS1O15537 224 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 GAGE7O76087 117 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 GAGE12FP0CL80 117 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 GAGE12GP0CL81 117 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 GAGE12IP0CL82 117 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 HTN1P15515 57 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 TIRAPP58753 221 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 CST9LP1Q5W188 147 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 ZFP2Q6ZN57 461 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 VAX2Q9UIW0 290 aa6.61□□□□□ -1.35
CLK4-209ENST00000521621 TRGV1A0A0A0MS02 117 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 F5H768 121 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 LY6G6CO95867 125 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 BCL2P10415 239 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 CRIP1P50238 77 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 FHL2Q14192 279 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 SH2D6Q7Z4S9 175 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 ZC2HC1AQ96GY0 325 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 LINC00479Q96M42 142 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 BIN3Q9NQY0 253 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 IGKV3D-20A0A0C4DH25 116 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 ORM1P02763 201 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 RNASE3P12724 160 aaKnown RBP6.6□□□□□ -1.35
CLK4-209ENST00000521621 CCL20P78556 96 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 MEF2BQ02080 365 aaPredicted RBP6.6□□□□□ -1.35
CLK4-209ENST00000521621 ZNF575Q86XF7 245 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 PRO0255Q9UI72 69 aa6.6□□□□□ -1.35
CLK4-209ENST00000521621 TRAV26-1A0A087WT03 109 aa6.59□□□□□ -1.35
CLK4-209ENST00000521621 A0A1B0GVG6 124 aa6.59□□□□□ -1.35
CLK4-209ENST00000521621 NXPH4O95158 308 aa6.59□□□□□ -1.35
CLK4-209ENST00000521621 CRYBA4P53673 196 aa6.59□□□□□ -1.35
CLK4-209ENST00000521621 VSIG2Q96IQ7 327 aa6.59□□□□□ -1.35
CLK4-209ENST00000521621 TRGV2A0A075B6R0 118 aa6.59□□□□□ -1.35
CLK4-209ENST00000521621 TRAV34A0A0B4J273 112 aa6.59□□□□□ -1.35
CLK4-209ENST00000521621 GNRH2O43555 120 aa6.59□□□□□ -1.35
CLK4-209ENST00000521621 MUC21Q5SSG8 566 aa6.59□□□□□ -1.35
CLK4-209ENST00000521621 hCG_2014768A0A024R1R8 64 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 SCO2A0A1W2PP80 73 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 A0A1W2PPQ1 181 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 C9JCJ5 164 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 TMEM250H0YL14 139 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 K7EP13 123 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 SH2D1AO60880 128 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 ASIPP42127 132 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 Q6ZR54 194 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 SSBP4Q9BWG4 385 aaPredicted RBP6.58□□□□□ -1.36
CLK4-209ENST00000521621 MRPS16Q9Y3D3 137 aaKnown RBP6.58□□□□□ -1.36
CLK4-209ENST00000521621 A8MWV9 139 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 ZNF506Q5JVG8 444 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 GNG13Q9P2W3 67 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 LY96Q9Y6Y9 160 aa6.58□□□□□ -1.36
CLK4-209ENST00000521621 TRBV6-4A0A1B0GX49 114 aa6.57□□□□□ -1.36
CLK4-209ENST00000521621 GATA1P15976 413 aaPredicted RBP6.57□□□□□ -1.36
CLK4-209ENST00000521621 UFSP1Q6NVU6 142 aa6.57□□□□□ -1.36
CLK4-209ENST00000521621 BAGE2Q86Y30 109 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms