RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 FSIP2Q5CZC0 6907 aa0.08□□□□□ -2.4
NPM1-206ENST00000519955 A0A096LNT2 108 aa0.07□□□□□ -2.4
NPM1-206ENST00000519955 UQCRQO14949 82 aa0.07□□□□□ -2.4
NPM1-206ENST00000519955 CDK12Q9NYV4 1490 aaPredicted RBP0.07□□□□□ -2.4
NPM1-206ENST00000519955 RBBP6Q7Z6E9 1792 aaKnown RBP0.06□□□□□ -2.4
NPM1-206ENST00000519955 FABP1P07148 127 aa0.06□□□□□ -2.4
NPM1-206ENST00000519955 TFAMQ00059 246 aaKnown RBP0.06□□□□□ -2.4
NPM1-206ENST00000519955 IQCJQ1A5X6 159 aa0.06□□□□□ -2.4
NPM1-206ENST00000519955 CCDC115Q96NT0 180 aa0.06□□□□□ -2.4
NPM1-206ENST00000519955 PNMA8CA0A1B0GUJ8 204 aa0.05□□□□□ -2.4
NPM1-206ENST00000519955 IFNA21P01568 189 aa0.05□□□□□ -2.4
NPM1-206ENST00000519955 CCKP06307 115 aa0.05□□□□□ -2.4
NPM1-206ENST00000519955 TMEM128Q5BJH2 165 aa0.05□□□□□ -2.4
NPM1-206ENST00000519955 SAMD13Q5VXD3 122 aa0.05□□□□□ -2.4
NPM1-206ENST00000519955 UNQ5815/PRO19632Q6UWF5 114 aa0.05□□□□□ -2.4
NPM1-206ENST00000519955 OR4S1Q8NGB4 309 aa0.05□□□□□ -2.4
NPM1-206ENST00000519955 FER1L6Q2WGJ9 1857 aa0.05□□□□□ -2.4
NPM1-206ENST00000519955 KDM6BO15054 1643 aa0.05□□□□□ -2.4
NPM1-206ENST00000519955 ZCCHC6Q5VYS8 1495 aaKnown RBP0.04□□□□□ -2.4
NPM1-206ENST00000519955 TPRP12270 2363 aaKnown RBP0.04□□□□□ -2.4
NPM1-206ENST00000519955 AFDNP55196 1824 aaKnown RBP0.04□□□□□ -2.4
NPM1-206ENST00000519955 ADCYAP1P18509 176 aa0.04□□□□□ -2.4
NPM1-206ENST00000519955 SDC4P31431 198 aa0.04□□□□□ -2.4
NPM1-206ENST00000519955 PROK2Q9HC23 129 aa0.04□□□□□ -2.4
NPM1-206ENST00000519955 CPDO75976 1380 aa0.04□□□□□ -2.4
NPM1-206ENST00000519955 PTPRGP23470 1445 aa0.04□□□□□ -2.4
NPM1-206ENST00000519955 BLMP54132 1417 aaPredicted RBP0.04□□□□□ -2.4
NPM1-206ENST00000519955 PTPRZ1P23471 2315 aaPredicted RBP0.03□□□□□ -2.4
NPM1-206ENST00000519955 NINQ8N4C6 2090 aa0.03□□□□□ -2.4
NPM1-206ENST00000519955 PCBD1P61457 104 aa0.03□□□□□ -2.4
NPM1-206ENST00000519955 VMO1Q7Z5L0 202 aa0.03□□□□□ -2.4
NPM1-206ENST00000519955 MED23Q9ULK4 1368 aa0.03□□□□□ -2.4
NPM1-206ENST00000519955 SLC25A5P05141 298 aaKnown RBP0.02□□□□□ -2.41
NPM1-206ENST00000519955 S100A5P33763 92 aa0.02□□□□□ -2.41
NPM1-206ENST00000519955 POLR2JP52435 117 aaKnown RBP0.02□□□□□ -2.41
NPM1-206ENST00000519955 TMEM35BQ8NCS4 154 aa0.02□□□□□ -2.41
NPM1-206ENST00000519955 WDR97A6NE52 1622 aa0.02□□□□□ -2.41
NPM1-206ENST00000519955 RREB1Q92766 1687 aa0.02□□□□□ -2.41
NPM1-206ENST00000519955 TRBV10-1A0A0K0K1A3 114 aa0.01□□□□□ -2.41
NPM1-206ENST00000519955 MPC1LP0DKB6 136 aa0.01□□□□□ -2.41
NPM1-206ENST00000519955 PSPHP78330 225 aa0.01□□□□□ -2.41
NPM1-206ENST00000519955 PBRM1Q86U86 1689 aa0.01□□□□□ -2.41
NPM1-206ENST00000519955 DSCR8Q96T75 97 aa0□□□□□ -2.41
NPM1-206ENST00000519955 DDA1Q9BW61 102 aa0□□□□□ -2.41
NPM1-206ENST00000519955 METTL1Q9UBP6 276 aaKnown RBP0□□□□□ -2.41
NPM1-206ENST00000519955 DLEC1Q9Y238 1755 aa-0.01□□□□□ -2.41
NPM1-206ENST00000519955 TEX49A0A1B0GTD5 131 aa-0.01□□□□□ -2.41
NPM1-206ENST00000519955 MCRIP1C9JLW8 97 aa-0.01□□□□□ -2.41
NPM1-206ENST00000519955 TCRAP04437 139 aa-0.01□□□□□ -2.41
NPM1-206ENST00000519955 HIST1H1BP16401 226 aaKnown RBP-0.01□□□□□ -2.41
NPM1-206ENST00000519955 S100GP29377 79 aa-0.01□□□□□ -2.41
NPM1-206ENST00000519955 ESPL1Q14674 2120 aa-0.02□□□□□ -2.41
NPM1-206ENST00000519955 PPP1R1CQ8WVI7 109 aa-0.02□□□□□ -2.41
NPM1-206ENST00000519955 SKA2Q8WVK7 121 aaPredicted RBP-0.02□□□□□ -2.41
NPM1-206ENST00000519955 PPDPFLQ8WWR9 84 aa-0.02□□□□□ -2.41
NPM1-206ENST00000519955 ZFYVE26Q68DK2 2539 aa-0.02□□□□□ -2.41
NPM1-206ENST00000519955 KIDINS220Q9ULH0 1771 aa-0.02□□□□□ -2.41
NPM1-206ENST00000519955 MYH1P12882 1939 aa-0.03□□□□□ -2.41
NPM1-206ENST00000519955 OR2H2O95918 312 aa-0.03□□□□□ -2.41
NPM1-206ENST00000519955 APOC1P02654 83 aa-0.03□□□□□ -2.41
NPM1-206ENST00000519955 RPS28P62857 69 aaKnown RBP-0.03□□□□□ -2.41
NPM1-206ENST00000519955 PLGLB1Q02325 96 aa-0.03□□□□□ -2.41
NPM1-206ENST00000519955 VPS25Q9BRG1 176 aa-0.03□□□□□ -2.41
NPM1-206ENST00000519955 COA4Q9NYJ1 87 aa-0.03□□□□□ -2.41
NPM1-206ENST00000519955 LRP5O75197 1615 aa-0.03□□□□□ -2.41
NPM1-206ENST00000519955 TANC1Q9C0D5 1861 aa-0.03□□□□□ -2.41
NPM1-206ENST00000519955 DPM2O94777 84 aa-0.04□□□□□ -2.42
NPM1-206ENST00000519955 HSD17B12Q53GQ0 312 aa-0.04□□□□□ -2.42
NPM1-206ENST00000519955 SMIM15Q7Z3B0 74 aa-0.04□□□□□ -2.42
NPM1-206ENST00000519955 SPRR2GQ9BYE4 73 aa-0.04□□□□□ -2.42
NPM1-206ENST00000519955 PIEZO1Q92508 2521 aa-0.04□□□□□ -2.42
NPM1-206ENST00000519955 OVOS2A0A0G2JMS6 1433 aa-0.04□□□□□ -2.42
NPM1-206ENST00000519955 TTC28Q96AY4 2481 aa-0.05□□□□□ -2.42
NPM1-206ENST00000519955 J3KT08 172 aa-0.05□□□□□ -2.42
NPM1-206ENST00000519955 SPINK1P00995 79 aa-0.05□□□□□ -2.42
NPM1-206ENST00000519955 NEFHP12036 1026 aa-0.05□□□□□ -2.42
NPM1-206ENST00000519955 Q5BKY6 102 aa-0.05□□□□□ -2.42
NPM1-206ENST00000519955 TMEM141Q96I45 108 aa-0.05□□□□□ -2.42
NPM1-206ENST00000519955 SSPOA2VEC9 5147 aa-0.05□□□□□ -2.42
NPM1-206ENST00000519955 TRAV12-2A0A075B6T6 113 aa-0.06□□□□□ -2.42
NPM1-206ENST00000519955 TRAV17A0A0B4J275 112 aa-0.06□□□□□ -2.42
NPM1-206ENST00000519955 C9JAW5 83 aa-0.06□□□□□ -2.42
NPM1-206ENST00000519955 PYYP10082 97 aa-0.06□□□□□ -2.42
NPM1-206ENST00000519955 OR8I2Q8N0Y5 310 aa-0.06□□□□□ -2.42
NPM1-206ENST00000519955 PRR15LQ9BU68 103 aa-0.06□□□□□ -2.42
NPM1-206ENST00000519955 SLC35B3Q9H1N7 401 aa-0.06□□□□□ -2.42
NPM1-206ENST00000519955 TAS2R8Q9NYW2 309 aa-0.06□□□□□ -2.42
NPM1-206ENST00000519955 ARHGAP31Q2M1Z3 1444 aa-0.06□□□□□ -2.42
NPM1-206ENST00000519955 SPAG17Q6Q759 2223 aa-0.06□□□□□ -2.42
NPM1-206ENST00000519955 LRP1Q07954 4544 aaKnown RBP-0.06□□□□□ -2.42
NPM1-206ENST00000519955 ABCA12Q86UK0 2595 aa-0.07□□□□□ -2.42
NPM1-206ENST00000519955 TRAV2A0A0B4J234 112 aa-0.07□□□□□ -2.42
NPM1-206ENST00000519955 CXorf51AA0A1B0GTR3 108 aa-0.07□□□□□ -2.42
NPM1-206ENST00000519955 TSTD3H0UI37 97 aa-0.07□□□□□ -2.42
NPM1-206ENST00000519955 BET1LQ9NYM9 111 aa-0.07□□□□□ -2.42
NPM1-206ENST00000519955 CALML5Q9NZT1 146 aa-0.07□□□□□ -2.42
NPM1-206ENST00000519955 NDUFAF1Q9Y375 327 aa-0.07□□□□□ -2.42
NPM1-206ENST00000519955 IGF2RP11717 2491 aa-0.07□□□□□ -2.42
NPM1-206ENST00000519955 DMBT1Q9UGM3 2413 aaPredicted RBP-0.07□□□□□ -2.42
NPM1-206ENST00000519955 MAP2P11137 1827 aaKnown RBP-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms