RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 TUBA4BQ9H853 241 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 GSN-AS1Q9NRJ2 163 aa2.05□□□□□ -2.08
MCF2-208ENST00000519895 TRGV11A0A075B6L2 103 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 C9JCJ5 164 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 TMEM250H0YL14 139 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 NXPH4O95158 308 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 GCHFRP30047 84 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 PKIAP61925 76 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 ZNF415Q09FC8 603 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 RNF212Q495C1 297 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 FFAR4Q5NUL3 377 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 TMUB2Q71RG4 321 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 AKAP14Q86UN6 197 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 Q8NAQ8 132 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 OR4B1Q8NGF8 309 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 OR2T35Q8NGX2 323 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 TMEM263Q8WUH6 116 aaKnown RBP2.04□□□□□ -2.08
MCF2-208ENST00000519895 ZNF586Q9NXT0 402 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 IGHV4-4A0A075B6R2 117 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 UBE2L5PA0A1B0GUS4 154 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 PDE6DO43924 150 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 ZNF138P52744 262 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 CEBPGP53567 150 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 MLANAQ16655 118 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 TMEM183BQ1AE95 376 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 AKR1C8PQ5T2L2 129 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 MIC13Q5XKP0 118 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 LGALS9CQ6DKI2 356 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 ZFP2Q6ZN57 461 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 POM121L12Q8N7R1 296 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 OR10G9Q8NGN4 311 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 UPK3BQ9BT76 320 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 ARL6Q9H0F7 186 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 Q9H8V8 135 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 KLK5Q9Y337 293 aaPredicted RBP2.04□□□□□ -2.08
MCF2-208ENST00000519895 TRAV10A0A0B4J240 114 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 A0A1W2PPV4 95 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 GAGE12BA1L429 117 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 C7orf71A4D174 169 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 IZUMO1RA6ND01 250 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 GAGE12HA6NDE8 117 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 ZNF324O75467 553 aaPredicted RBP2.04□□□□□ -2.08
MCF2-208ENST00000519895 APOHP02749 345 aaPredicted RBP2.04□□□□□ -2.08
MCF2-208ENST00000519895 DEFB131AP59861 70 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 FAM231DQ6ZW35 169 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 C9orf62Q8N4C0 152 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 EIF4E3Q8N5X7 224 aaKnown RBP2.04□□□□□ -2.08
MCF2-208ENST00000519895 CYB561D1Q8N8Q1 229 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 UHRF2Q96PU4 802 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 NDFIP1Q9BT67 221 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 RSG1Q9BU20 258 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 C20orf24Q9BUV8 137 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 TM2D2Q9BX73 214 aa2.04□□□□□ -2.08
MCF2-208ENST00000519895 VPS13DQ5THJ4 4388 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 NEBP20929 6669 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 CRXO43186 299 aaPredicted RBP2.03□□□□□ -2.08
MCF2-208ENST00000519895 PFDN1O60925 122 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 TCL1AP56279 114 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 LINC01620Q4KN68 170 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 TMEM97Q5BJF2 176 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 GATD1Q8NB37 220 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 VGLL1Q99990 258 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 SCRT1Q9BWW7 348 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 EPDR1Q9UM22 224 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 CSMD3Q7Z407 3707 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 TRAV21A0A0B4J279 112 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 SPINK4O60575 86 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 CST7O76096 145 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 GAS8-AS1O95177 125 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 LTAP01374 205 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 CD7P09564 240 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 SPART-AS1P0CW21 52 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 FOXA3P55318 350 aaPredicted RBP2.03□□□□□ -2.08
MCF2-208ENST00000519895 GUCA2BQ16661 112 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 SPINK9Q5DT21 86 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 ZNF506Q5JVG8 444 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 FAM78BQ5VT40 261 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 RNASEKQ6P5S7 137 aaKnown RBP2.03□□□□□ -2.08
MCF2-208ENST00000519895 CEMP1Q6PRD7 247 aaPredicted RBP2.03□□□□□ -2.08
MCF2-208ENST00000519895 C19orf35Q6ZS72 473 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 SBSPONQ8IVN8 264 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 RPP25LQ8N5L8 163 aaKnown RBP2.03□□□□□ -2.08
MCF2-208ENST00000519895 ZFAND2AQ8N6M9 145 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 RASL10AQ92737 203 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 C20orf173Q96LM9 149 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 C9orf85Q96MD7 179 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 CHCHD7Q9BUK0 85 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 CNFNQ9BYD5 112 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 GFRA4Q9GZZ7 299 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 Q9H3A6 140 aa2.03□□□□□ -2.08
MCF2-208ENST00000519895 A0A1B0GW15 77 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 FAM74A7A6NL05 159 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 H3BQ15 152 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 SMLR1H3BR10 107 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 SNAI2O43623 268 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 SIX6O95475 246 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 IGHV3-23P01764 117 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 TCRAP04437 139 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 ORM2P19652 201 aa2.02□□□□□ -2.09
MCF2-208ENST00000519895 CACNG7P62955 275 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms