RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 PRAC2D3DTV9 90 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 F2Z2F3 143 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 MGST1P10620 155 aaKnown RBP5.58□□□□□ -1.52
SDCBP-206ENST00000519115 HLA-DRB4P13762 266 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 LEPP41159 167 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 DEFB131AP59861 70 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 TDRG1Q3Y452 100 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 RNF182Q8N6D2 247 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 ZC2HC1AQ96GY0 325 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 C20orf173Q96LM9 149 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 SPATA25Q9BR10 227 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 RPP21Q9H633 154 aaKnown RBP5.58□□□□□ -1.52
SDCBP-206ENST00000519115 NAT8BQ9UHF3 227 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 HLA-DRB4X5D2U9 266 aa5.58□□□□□ -1.52
SDCBP-206ENST00000519115 IGKV2-40A0A087WW87 121 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-206ENST00000519115 TRAV21A0A0B4J279 112 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 PGPEP1LA6NFU8 196 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 H3BMM0 161 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 IGKV2D-40P01614 121 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-206ENST00000519115 MT-ND6P03923 174 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 S100A8P05109 93 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 MED14OSP0DP75 135 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 CRIP1P50238 77 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 FAM3BP58499 235 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-206ENST00000519115 NUTF2P61970 127 aaKnown RBP5.57□□□□□ -1.52
SDCBP-206ENST00000519115 OR5I1Q13606 314 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 PSMG4Q5JS54 123 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 ZFAND2AQ8N6M9 145 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 KCNS1Q96KK3 526 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 LINC00467Q9BRT7 94 aa5.57□□□□□ -1.52
SDCBP-206ENST00000519115 KNCNA6PVL3 124 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 GPX1P07203 203 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 RAB5AP20339 215 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 HLA-DMBP28068 263 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 CDKN1BP46527 198 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 APOC4P55056 127 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 DEFB135Q30KP9 77 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 PIK3CD-AS1Q5SR53 167 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 IGFL4Q6B9Z1 124 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 TMEM88Q6PEY1 159 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 FAM210BQ96KR6 192 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 WWC2-AS2Q96NR7 200 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 SSBP4Q9BWG4 385 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-206ENST00000519115 GNB1LQ9BYB4 327 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 CNFNQ9BYD5 112 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 RNASE7Q9H1E1 156 aaKnown RBP5.56□□□□□ -1.52
SDCBP-206ENST00000519115 RPH3ALQ9UNE2 315 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 RYR1P21817 5038 aa5.56□□□□□ -1.52
SDCBP-206ENST00000519115 KMT2CQ8NEZ4 4911 aaKnown RBP5.56□□□□□ -1.52
SDCBP-206ENST00000519115 HUWE1Q7Z6Z7 4374 aaKnown RBP5.55□□□□□ -1.52
SDCBP-206ENST00000519115 IGHV4-4A0A075B6R2 117 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 TMEM189A5PLL7 270 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 SH2D1AO60880 128 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 ZNF324O75467 553 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-206ENST00000519115 SCO1O75880 301 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 OR5AL1P0C617 328 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 DEFB1P60022 68 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 ERCC8Q13216 396 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 ACTL10Q5JWF8 245 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 MORN3Q6PF18 240 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-206ENST00000519115 AMTNQ6UX39 209 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 CBLN2Q8IUK8 224 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 GATD1Q8NB37 220 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 OR2D3Q8NGH3 330 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 FRZBQ92765 325 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 PTH2Q96A98 100 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 NDUFAF3Q9BU61 184 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 C1QTNF4Q9BXJ3 329 aa5.55□□□□□ -1.52
SDCBP-206ENST00000519115 KIR2DL5BA0A0G2JN68 375 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 KIR2DL5BA0A0G2JPC4 375 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 A0A1B0GUT8 65 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 HIGD1CA8MV81 97 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 CA1P00915 261 aaPredicted RBP5.54□□□□□ -1.52
SDCBP-206ENST00000519115 STHQ8IWL8 128 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 KIR2DL5AQ8N109 375 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 TMEM256Q8N2U0 113 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 NUP35Q8NFH5 326 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 KIR2DL5BQ8NHK3 375 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 SGK494Q96LW2 274 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 OVOL2Q9BRP0 275 aa5.54□□□□□ -1.52
SDCBP-206ENST00000519115 C7orf71A4D174 169 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 SNAI2O43623 268 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 HLA-DQA1P01909 254 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 ORM1P02763 201 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 IGLC6P0CF74 106 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 PRB4P10163 310 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-206ENST00000519115 CTRLP40313 264 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 ZNF80P51504 273 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-206ENST00000519115 CACNG7P62955 275 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 RIGQ13278 110 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 PRR27Q6MZM9 219 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 ZNF493Q6ZR52 646 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 TRPT1Q86TN4 253 aaKnown RBP5.53□□□□□ -1.52
SDCBP-206ENST00000519115 ZNF575Q86XF7 245 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 NHLRC2Q8NBF2 726 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 BORCS7Q96B45 105 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 C8orf49Q96NF6 230 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 NEU1Q99519 415 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 CSTL1Q9H114 145 aa5.53□□□□□ -1.52
SDCBP-206ENST00000519115 A0A1B0GXF2 115 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms