RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	NEK7	Q8TDX7	302 aa		-0.92	□□□□□ -2.56
PCM1-208	ENST00000518877	MCEE	Q96PE7	176 aa		-0.92	□□□□□ -2.56
PCM1-208	ENST00000518877	DSCR8	Q96T75	97 aa		-0.92	□□□□□ -2.56
PCM1-208	ENST00000518877	GINS3	Q9BRX5	216 aa		-0.92	□□□□□ -2.56
PCM1-208	ENST00000518877	DOCK11	Q5JSL3	2073 aa		-0.92	□□□□□ -2.56
PCM1-208	ENST00000518877	C2CD3	Q4AC94	2353 aa		-0.92	□□□□□ -2.56
PCM1-208	ENST00000518877	CDK12	Q9NYV4	1490 aa	Predicted RBP	-0.92	□□□□□ -2.56
PCM1-208	ENST00000518877	LAMA5	O15230	3695 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	GVQW2	A0A096LPI5	108 aa	Predicted RBP	-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	TMEM189	A5PLL7	270 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877		C9JAW5	83 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	SLC25A4	P12235	298 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	TPT1	P13693	172 aa	Known RBP	-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	HSD11B1	P28845	292 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	ELOF1	P60002	83 aa	Known RBP	-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	MAX	P61244	160 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	REEP5	Q00765	189 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	EMX2	Q04743	252 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	SMIM20	Q8N5G0	67 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	TEX29	Q8N6K0	151 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	OR8J3	Q8NGG0	315 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	PRELID3A	Q96N28	172 aa		-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	BLM	P54132	1417 aa	Predicted RBP	-0.93	□□□□□ -2.56
PCM1-208	ENST00000518877	DLC1	Q96QB1	1528 aa		-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	HERC2	O95714	4834 aa		-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	NUP210	Q8TEM1	1887 aa	Predicted RBP	-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	TECPR2	O15040	1411 aa		-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	TRAPPC8	Q9Y2L5	1435 aa		-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	GABARAP	H6UMI1	98 aa		-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	EDF1	O60869	148 aa	Known RBP	-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	SAA1	P0DJI8	122 aa	Predicted RBP	-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	SPRR2B	P35325	72 aa		-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	GTF2A1	P52655	376 aa	Predicted RBP	-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	RPL19	P84098	196 aa	Known RBP	-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	ATG5	Q9H1Y0	275 aa		-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	C19orf12	Q9NSK7	152 aa		-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	ADGB	Q8N7X0	1667 aa		-0.94	□□□□□ -2.56
PCM1-208	ENST00000518877	SSC5D	A1L4H1	1573 aa		-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	NF1	P21359	2839 aa		-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	FAM135B	Q49AJ0	1406 aa		-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	TRDV1	A0A1B0GX56	115 aa		-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	PYY	P10082	97 aa		-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	CCSMST1	Q4G0I0	132 aa		-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	CEP19	Q96LK0	163 aa		-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	MED11	Q9P086	117 aa		-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	VIRMA	Q69YN4	1812 aa	Known RBP	-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	NBEAL1	Q6ZS30	2694 aa		-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	SETX	Q7Z333	2677 aa	Known RBP	-0.95	□□□□□ -2.56
PCM1-208	ENST00000518877	WNK1	Q9H4A3	2382 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	ACAN	P16112	2415 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	LRP5	O75197	1615 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	TCOF1	Q13428	1488 aa	Known RBP	-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877		F2Z2F3	143 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	IFNA1	P01562	189 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	BLCAP	P62952	87 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	GNG3	P63215	75 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	OR13C6P	Q8NH95	151 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	NUBP2	Q9Y5Y2	271 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	MYH1	P12882	1939 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	PCLO	Q9Y6V0	5065 aa		-0.96	□□□□□ -2.56
PCM1-208	ENST00000518877	LAMB1	P07942	1786 aa		-0.97	□□□□□ -2.56
PCM1-208	ENST00000518877	FLG	P20930	4061 aa	Predicted RBP	-0.97	□□□□□ -2.56
PCM1-208	ENST00000518877	TRBV27	A0A0K0K1C4	114 aa		-0.97	□□□□□ -2.56
PCM1-208	ENST00000518877	LOC107986453	A0A1B0GWG9	222 aa		-0.97	□□□□□ -2.56
PCM1-208	ENST00000518877	BASP1	P80723	227 aa	Known RBP	-0.97	□□□□□ -2.56
PCM1-208	ENST00000518877	FADD	Q13158	208 aa		-0.97	□□□□□ -2.56
PCM1-208	ENST00000518877	DEFB109B	Q30KR1	87 aa		-0.97	□□□□□ -2.56
PCM1-208	ENST00000518877	TMEM141	Q96I45	108 aa		-0.97	□□□□□ -2.56
PCM1-208	ENST00000518877	BPESC1	Q9GZL8	116 aa		-0.97	□□□□□ -2.56
PCM1-208	ENST00000518877	ATR	Q13535	2644 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	SPTBN1	Q01082	2364 aa	Known RBP	-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	CDK13	Q14004	1512 aa	Known RBP	-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	IFITM5	A6NNB3	132 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	S100A11	P31949	105 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	SDC2	P34741	201 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	MT4	P47944	62 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	CRYBA4	P53673	196 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	TAS2R41	P59536	307 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	LINC00305	Q7Z4B0	112 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	MORN4	Q8NDC4	146 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	OR51A4	Q8NGJ6	313 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	UFC1	Q9Y3C8	167 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	CREBBP	Q92793	2442 aa		-0.98	□□□□□ -2.57
PCM1-208	ENST00000518877	HELZ	P42694	1942 aa	Known RBP	-0.99	□□□□□ -2.57
PCM1-208	ENST00000518877		A0A087WTM6	91 aa		-0.99	□□□□□ -2.57
PCM1-208	ENST00000518877	HRCT1	Q6UXD1	115 aa		-0.99	□□□□□ -2.57
PCM1-208	ENST00000518877	CROCCP2	Q86T23	111 aa		-0.99	□□□□□ -2.57
PCM1-208	ENST00000518877	DYDC1	Q8WWB3	177 aa		-0.99	□□□□□ -2.57
PCM1-208	ENST00000518877	SMIM7	Q9BQ49	75 aa		-0.99	□□□□□ -2.57
PCM1-208	ENST00000518877	KIDINS220	Q9ULH0	1771 aa		-0.99	□□□□□ -2.57
PCM1-208	ENST00000518877	GVINP1	Q7Z2Y8	2422 aa		-0.99	□□□□□ -2.57
PCM1-208	ENST00000518877	STAB2	Q8WWQ8	2551 aa		-1	□□□□□ -2.57
PCM1-208	ENST00000518877	NHSL1	Q5SYE7	1610 aa		-1	□□□□□ -2.57
PCM1-208	ENST00000518877	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	-1	□□□□□ -2.57
PCM1-208	ENST00000518877	MCRIP1	C9JLW8	97 aa		-1	□□□□□ -2.57
PCM1-208	ENST00000518877		H3BMG7	143 aa		-1	□□□□□ -2.57
PCM1-208	ENST00000518877	CRYGS	P22914	178 aa		-1	□□□□□ -2.57
PCM1-208	ENST00000518877	UNQ5815/PRO19632	Q6UWF5	114 aa		-1	□□□□□ -2.57
PCM1-208	ENST00000518877	OTOS	Q8NHW6	89 aa		-1	□□□□□ -2.57
PCM1-208	ENST00000518877	PLCE1	Q9P212	2302 aa		-1	□□□□□ -2.57

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