RNA–Protein interactions for RNA: ENST00000518263.5

CTNNA1-207, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-207ENST00000518263 MBD5Q9P267 1494 aa1.81□□□□□ -2.12
CTNNA1-207ENST00000518263 UNC80Q8N2C7 3258 aa1.81□□□□□ -2.12
CTNNA1-207ENST00000518263 RTTNQ86VV8 2226 aa1.81□□□□□ -2.12
CTNNA1-207ENST00000518263 RNF17Q9BXT8 1623 aaKnown RBP1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 PTPRZ1P23471 2315 aaPredicted RBP1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 NCOR1O75376 2440 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 CASZ1Q86V15 1759 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 NCOR2Q9Y618 2525 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 SETD2Q9BYW2 2564 aaPredicted RBP1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 MCM3APO60318 1980 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 EXPH5Q8NEV8 1989 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 CHD3Q12873 2000 aaKnown RBP1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 ERC2-IT1O76042 136 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 APOC1P02654 83 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 FREM3P0C091 2139 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 BRS3P32247 399 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 PCBD1P61457 104 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 C1orf137Q5JT78 98 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 CLLU1Q5K131 121 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 GLIPR1L1Q6UWM5 242 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 ZCCHC23Q6ZST2 131 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 KRTAP13-1Q8IUC0 172 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 Q96M85 177 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 CST11Q9H112 138 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 SLC35B3Q9H1N7 401 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 SOX21Q9Y651 276 aaPredicted RBP1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 CNOT1A5YKK6 2376 aaKnown RBP1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 RALGAPBQ86X10 1494 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 POLQO75417 2590 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 GLI2P10070 1586 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 TTC37Q6PGP7 1564 aa1.8□□□□□ -2.12
CTNNA1-207ENST00000518263 CASP8AP2Q9UKL3 1982 aa1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 CFAP46Q8IYW2 2715 aa1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 TRAV14DV4A0A0A6YYC5 116 aa1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 RNASE3P12724 160 aaKnown RBP1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 CNBPP62633 177 aaKnown RBP1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 PLGLB1Q02325 96 aa1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 CIRBPQ14011 172 aaKnown RBP1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 OR5AS1Q8N127 324 aa1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 OR5AK2Q8NH90 309 aa1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 TMEM2Q9UHN6 1383 aa1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 ROBO1Q9Y6N7 1651 aa1.79□□□□□ -2.12
CTNNA1-207ENST00000518263 NINQ8N4C6 2090 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 MAP3K4Q9Y6R4 1608 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 FGD6Q6ZV73 1430 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 C3orf85A0A1B0GTC6 90 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 F8W036 122 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 PITX3O75364 302 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 CXCL8P10145 99 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 LSM3P62310 102 aaKnown RBP1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 C10orf55Q5SWW7 151 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 FOXI2Q6ZQN5 318 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 C10orf111Q8N326 155 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 VCANP13611 3396 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 EYSQ5T1H1 3165 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 KALRNO60229 2985 aa1.78□□□□□ -2.12
CTNNA1-207ENST00000518263 NOTCH1P46531 2555 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 KIAA0586Q9BVV6 1533 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 UHRF1BP1LA0JNW5 1464 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 ZNF518AQ6AHZ1 1483 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 SPG11Q96JI7 2443 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 SMG6Q86US8 1419 aaKnown RBP1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 TRBV6-8A0A0A6YYG3 113 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 LOC107984156A0A0G2JMH3 177 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 LOC100130705A0A1B0GUX0 176 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 MIF4GDA9UHW6 222 aaKnown RBP1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 CKS2P33552 79 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 ETV6P41212 452 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 MIR22HGQ0VDD5 57 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 ASB16-AS1Q495Z4 193 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 C2orf82Q6UX34 121 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 IZUMO2Q6UXV1 221 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 COA5Q86WW8 74 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 ARL17AQ8IVW1 177 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 MPC1Q9Y5U8 109 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 LRRK2Q5S007 2527 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 QRICH2Q9H0J4 1663 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 BIVM-ERCC5R4GMW8 1640 aa1.77□□□□□ -2.13
CTNNA1-207ENST00000518263 ALPK2Q86TB3 2170 aa1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 CDK13Q14004 1512 aaKnown RBP1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 TRBV20-1A0A075B6N2 111 aa1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 S100A1P23297 94 aa1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 CCSMST1Q4G0I0 132 aa1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 KRTAP5-4Q6L8H1 288 aa1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 PATE1Q8WXA2 126 aa1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 TMEM191AQ9H0A3 160 aa1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 RANBP2P49792 3224 aaKnown RBP1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 HELZ2Q9BYK8 2649 aaKnown RBP1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 EFCAB6Q5THR3 1501 aa1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 FAM135AQ9P2D6 1515 aa1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 SPTBN5Q9NRC6 3674 aaKnown RBP1.76□□□□□ -2.13
CTNNA1-207ENST00000518263 SPTBN2O15020 2390 aa1.75□□□□□ -2.13
CTNNA1-207ENST00000518263 IGHV1-24A0A0C4DH33 117 aa1.75□□□□□ -2.13
CTNNA1-207ENST00000518263 A0A0G2JMM0 328 aa1.75□□□□□ -2.13
CTNNA1-207ENST00000518263 PNMA8CA0A1B0GUJ8 204 aa1.75□□□□□ -2.13
CTNNA1-207ENST00000518263 SPAARA0A1B0GVQ0 90 aa1.75□□□□□ -2.13
CTNNA1-207ENST00000518263 A0A1W2PPB8 328 aa1.75□□□□□ -2.13
CTNNA1-207ENST00000518263 KIR3DP1A8MWS1 328 aa1.75□□□□□ -2.13
CTNNA1-207ENST00000518263 FAM25AB3EWG3 89 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms