RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 F8P00451 2351 aa17.53■□□□□ 0.4
SLIT3-204ENST00000518140 C2CD3Q4AC94 2353 aa17.53■□□□□ 0.4
SLIT3-204ENST00000518140 CCL24O00175 119 aa17.52■□□□□ 0.4
SLIT3-204ENST00000518140 TCF21O43680 179 aa17.52■□□□□ 0.4
SLIT3-204ENST00000518140 CSN3P07498 182 aa17.52■□□□□ 0.4
SLIT3-204ENST00000518140 ZNF688P0C7X2 276 aa17.52■□□□□ 0.4
SLIT3-204ENST00000518140 G0S2P27469 103 aa17.52■□□□□ 0.4
SLIT3-204ENST00000518140 SPATA45Q537H7 98 aa17.52■□□□□ 0.4
SLIT3-204ENST00000518140 PRR31Q5SQ13 230 aa17.52■□□□□ 0.4
SLIT3-204ENST00000518140 OR8A1Q8NGG7 326 aa17.52■□□□□ 0.4
SLIT3-204ENST00000518140 K7EQG2 157 aa17.52■□□□□ 0.39
SLIT3-204ENST00000518140 ZNF25P17030 456 aaPredicted RBP17.52■□□□□ 0.39
SLIT3-204ENST00000518140 HIST1H1AQ02539 215 aaPredicted RBP17.52■□□□□ 0.39
SLIT3-204ENST00000518140 OR10J6PQ8NGY7 276 aa17.52■□□□□ 0.39
SLIT3-204ENST00000518140 CRLF1O75462 422 aa17.51■□□□□ 0.39
SLIT3-204ENST00000518140 KRTAP10-3P60369 221 aa17.51■□□□□ 0.39
SLIT3-204ENST00000518140 FHL3Q13643 280 aa17.51■□□□□ 0.39
SLIT3-204ENST00000518140 GFRA4Q9GZZ7 299 aa17.51■□□□□ 0.39
SLIT3-204ENST00000518140 NTF3P20783 257 aa17.51■□□□□ 0.39
SLIT3-204ENST00000518140 ID1P41134 155 aa17.51■□□□□ 0.39
SLIT3-204ENST00000518140 PRR9Q5T870 116 aa17.51■□□□□ 0.39
SLIT3-204ENST00000518140 ALKBH7Q9BT30 221 aaPredicted RBP17.51■□□□□ 0.39
SLIT3-204ENST00000518140 PPP1R14DQ9NXH3 145 aa17.51■□□□□ 0.39
SLIT3-204ENST00000518140 PEMTQ9UBM1 199 aa17.51■□□□□ 0.39
SLIT3-204ENST00000518140 BAHCC1Q9P281 2608 aa17.5■□□□□ 0.39
SLIT3-204ENST00000518140 A0A1B0GXF2 115 aa17.5■□□□□ 0.39
SLIT3-204ENST00000518140 TMEM189A5PLL7 270 aa17.5■□□□□ 0.39
SLIT3-204ENST00000518140 M0QZ24 198 aa17.5■□□□□ 0.39
SLIT3-204ENST00000518140 PSMG4Q5JS54 123 aa17.5■□□□□ 0.39
SLIT3-204ENST00000518140 RBPMS2Q6ZRY4 209 aaKnown RBP17.5■□□□□ 0.39
SLIT3-204ENST00000518140 LINC00477Q96M19 166 aa17.5■□□□□ 0.39
SLIT3-204ENST00000518140 FABP5P3A8MUU1 101 aa17.49■□□□□ 0.39
SLIT3-204ENST00000518140 C11orf21Q9P2W6 132 aa17.49■□□□□ 0.39
SLIT3-204ENST00000518140 UQCR10Q9UDW1 63 aa17.49■□□□□ 0.39
SLIT3-204ENST00000518140 ADARB2-AS1A8MUL3 147 aa17.49■□□□□ 0.39
SLIT3-204ENST00000518140 J3KRW8 73 aa17.49■□□□□ 0.39
SLIT3-204ENST00000518140 CAMPP49913 170 aa17.49■□□□□ 0.39
SLIT3-204ENST00000518140 FOXA3P55318 350 aaPredicted RBP17.49■□□□□ 0.39
SLIT3-204ENST00000518140 FAM231BA6NCW3 169 aa17.48■□□□□ 0.39
SLIT3-204ENST00000518140 HSBP1O75506 76 aa17.48■□□□□ 0.39
SLIT3-204ENST00000518140 KIR3DS1Q14943 382 aa17.48■□□□□ 0.39
SLIT3-204ENST00000518140 CYSRT1A8MQ03 144 aa17.47■□□□□ 0.39
SLIT3-204ENST00000518140 ORM1P02763 201 aa17.47■□□□□ 0.39
SLIT3-204ENST00000518140 IGLC3P0DOY3 106 aa17.47■□□□□ 0.39
SLIT3-204ENST00000518140 ZFAND2AQ8N6M9 145 aa17.47■□□□□ 0.39
SLIT3-204ENST00000518140 TPPP3Q9BW30 176 aa17.47■□□□□ 0.39
SLIT3-204ENST00000518140 SSBP4Q9BWG4 385 aaPredicted RBP17.47■□□□□ 0.39
SLIT3-204ENST00000518140 NIPBLQ6KC79 2804 aaeCLIP17.47■□□□□ 0.39
SLIT3-204ENST00000518140 PMCHL1Q16048 86 aa17.46■□□□□ 0.39
SLIT3-204ENST00000518140 TMEM61Q8N0U2 210 aa17.46■□□□□ 0.39
SLIT3-204ENST00000518140 TMEM208Q9BTX3 173 aa17.46■□□□□ 0.39
SLIT3-204ENST00000518140 GAGE1Q13065 139 aa17.46■□□□□ 0.39
SLIT3-204ENST00000518140 SAMD13Q5VXD3 122 aa17.46■□□□□ 0.39
SLIT3-204ENST00000518140 FAM19A4Q96LR4 140 aa17.46■□□□□ 0.39
SLIT3-204ENST00000518140 DLEU1O43261 78 aa17.45■□□□□ 0.38
SLIT3-204ENST00000518140 HBBP68871 147 aa17.45■□□□□ 0.38
SLIT3-204ENST00000518140 DEFB114Q30KQ6 69 aa17.45■□□□□ 0.38
SLIT3-204ENST00000518140 NSUN5P1Q3KNT7 163 aa17.45■□□□□ 0.38
SLIT3-204ENST00000518140 IGKV3D-20A0A0C4DH25 116 aa17.44■□□□□ 0.38
SLIT3-204ENST00000518140 M0R2Z0 102 aa17.44■□□□□ 0.38
SLIT3-204ENST00000518140 ARMS2P0C7Q2 107 aa17.44■□□□□ 0.38
SLIT3-204ENST00000518140 SNRPD3P62318 126 aaKnown RBP17.44■□□□□ 0.38
SLIT3-204ENST00000518140 BATFQ16520 125 aa17.44■□□□□ 0.38
SLIT3-204ENST00000518140 MUC21A0A0G2JKD1 596 aa17.44■□□□□ 0.38
SLIT3-204ENST00000518140 MUC21A0A140T8X8 626 aa17.44■□□□□ 0.38
SLIT3-204ENST00000518140 MUC21Q5SSG8 566 aa17.44■□□□□ 0.38
SLIT3-204ENST00000518140 COL5A1-AS1Q5SY13 56 aa17.44■□□□□ 0.38
SLIT3-204ENST00000518140 LENEPQ9Y5L5 61 aa17.44■□□□□ 0.38
SLIT3-204ENST00000518140 RNASEKQ6P5S7 137 aaKnown RBP17.43■□□□□ 0.38
SLIT3-204ENST00000518140 JMJD1CQ15652 2540 aa17.43■□□□□ 0.38
SLIT3-204ENST00000518140 CD300EQ496F6 205 aaPredicted RBP17.43■□□□□ 0.38
SLIT3-204ENST00000518140 LYZL1Q6UWQ5 148 aa17.43■□□□□ 0.38
SLIT3-204ENST00000518140 DYNLRB2Q8TF09 96 aa17.43■□□□□ 0.38
SLIT3-204ENST00000518140 BTF3P20290 206 aaKnown RBP17.42■□□□□ 0.38
SLIT3-204ENST00000518140 EBLN2Q6P2I7 272 aa17.42■□□□□ 0.38
SLIT3-204ENST00000518140 AGRNO00468 2067 aa17.42■□□□□ 0.38
SLIT3-204ENST00000518140 LINC01559Q495D7 138 aa17.41■□□□□ 0.38
SLIT3-204ENST00000518140 Q6ZN92 141 aa17.41■□□□□ 0.38
SLIT3-204ENST00000518140 A0A0J9YX75 114 aa17.41■□□□□ 0.38
SLIT3-204ENST00000518140 A0A1B0GUT8 65 aa17.41■□□□□ 0.38
SLIT3-204ENST00000518140 IGKV3-20P01619 116 aa17.41■□□□□ 0.38
SLIT3-204ENST00000518140 RNASE4P34096 147 aaKnown RBP17.41■□□□□ 0.38
SLIT3-204ENST00000518140 GOLT1BQ9Y3E0 138 aa17.41■□□□□ 0.38
SLIT3-204ENST00000518140 HNRNPA3P51991 378 aaKnown RBP17.4■□□□□ 0.38
SLIT3-204ENST00000518140 C20orf202A1L168 122 aa17.4■□□□□ 0.38
SLIT3-204ENST00000518140 URB1-AS1Q96HZ7 61 aa17.4■□□□□ 0.38
SLIT3-204ENST00000518140 IGLC6P0CF74 106 aa17.39■□□□□ 0.37
SLIT3-204ENST00000518140 ATOH7Q8N100 152 aa17.39■□□□□ 0.37
SLIT3-204ENST00000518140 TRAV9-2A0A087WT02 112 aa17.38■□□□□ 0.37
SLIT3-204ENST00000518140 RPS20P60866 119 aaKnown RBP17.38■□□□□ 0.37
SLIT3-204ENST00000518140 FER1L6-AS1Q8NA97 138 aa17.38■□□□□ 0.37
SLIT3-204ENST00000518140 LAMTOR2Q9Y2Q5 125 aa17.38■□□□□ 0.37
SLIT3-204ENST00000518140 DEFB131AP59861 70 aa17.37■□□□□ 0.37
SLIT3-204ENST00000518140 APRG1Q8IVJ8 170 aa17.37■□□□□ 0.37
SLIT3-204ENST00000518140 CHCHD1Q96BP2 118 aaKnown RBP17.37■□□□□ 0.37
SLIT3-204ENST00000518140 MAJINQ3KP22 176 aa17.36■□□□□ 0.37
SLIT3-204ENST00000518140 Q6AWC8 147 aa17.36■□□□□ 0.37
SLIT3-204ENST00000518140 KNCNA6PVL3 124 aa17.36■□□□□ 0.37
SLIT3-204ENST00000518140 MRPS16Q9Y3D3 137 aaKnown RBP17.36■□□□□ 0.37
SLIT3-204ENST00000518140 NPSP0C0P6 89 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms