RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, human

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-225	ENST00000515824	TRAV26-1	A0A087WT03	109 aa		13.58	□□□□□ -0.24
LMNA-225	ENST00000515824	PEX7	O00628	323 aa		13.58	□□□□□ -0.24
LMNA-225	ENST00000515824	GCG	P01275	180 aa		13.58	□□□□□ -0.24
LMNA-225	ENST00000515824	HOXA5	P20719	270 aa		13.58	□□□□□ -0.24
LMNA-225	ENST00000515824	CST9LP1	Q5W188	147 aa		13.58	□□□□□ -0.24
LMNA-225	ENST00000515824	EIF5AL1	Q6IS14	154 aa	Known RBP	13.58	□□□□□ -0.24
LMNA-225	ENST00000515824	LINC00479	Q96M42	142 aa		13.58	□□□□□ -0.24
LMNA-225	ENST00000515824	SDF2L1	Q9HCN8	221 aa		13.58	□□□□□ -0.24
LMNA-225	ENST00000515824	MRPL16	Q9NX20	251 aa	Known RBP	13.58	□□□□□ -0.24
LMNA-225	ENST00000515824	DNAH10	Q8IVF4	4471 aa		13.57	□□□□□ -0.24
LMNA-225	ENST00000515824	hCG_2014768	A0A024R1R8	64 aa		13.57	□□□□□ -0.24
LMNA-225	ENST00000515824	TRAV34	A0A0B4J273	112 aa		13.57	□□□□□ -0.24
LMNA-225	ENST00000515824	GNRH2	O43555	120 aa		13.57	□□□□□ -0.24
LMNA-225	ENST00000515824	H2AFB1	P0C5Y9	115 aa		13.57	□□□□□ -0.24
LMNA-225	ENST00000515824	AKAP14	Q86UN6	197 aa		13.57	□□□□□ -0.24
LMNA-225	ENST00000515824	TCEAL7	Q9BRU2	100 aa		13.57	□□□□□ -0.24
LMNA-225	ENST00000515824	ARL2-SNX15	V9GYD0	113 aa		13.57	□□□□□ -0.24
LMNA-225	ENST00000515824		A0A0J9YY99	117 aa		13.56	□□□□□ -0.24
LMNA-225	ENST00000515824		H3BNG1	76 aa		13.56	□□□□□ -0.24
LMNA-225	ENST00000515824	PFN1	P07737	140 aa	Known RBP	13.56	□□□□□ -0.24
LMNA-225	ENST00000515824	ZNF80	P51504	273 aa	Predicted RBP	13.56	□□□□□ -0.24
LMNA-225	ENST00000515824	PAGE4	O60829	102 aa		13.55	□□□□□ -0.24
LMNA-225	ENST00000515824	TYMS	P04818	313 aa		13.55	□□□□□ -0.24
LMNA-225	ENST00000515824	RAB5C	P51148	216 aa		13.55	□□□□□ -0.24
LMNA-225	ENST00000515824	IGHV3-16	A0A0C4DH30	117 aa		13.54	□□□□□ -0.24
LMNA-225	ENST00000515824		A0A1B0GV50	99 aa		13.54	□□□□□ -0.24
LMNA-225	ENST00000515824	CCL18	P55774	89 aa		13.54	□□□□□ -0.24
LMNA-225	ENST00000515824	FAM3B	P58499	235 aa	Predicted RBP	13.54	□□□□□ -0.24
LMNA-225	ENST00000515824	RASL10A	Q92737	203 aa		13.54	□□□□□ -0.24
LMNA-225	ENST00000515824	IGHV3-53	P01767	116 aa		13.53	□□□□□ -0.24
LMNA-225	ENST00000515824	UBE2G1	P62253	170 aa		13.53	□□□□□ -0.24
LMNA-225	ENST00000515824	SLA	Q13239	276 aa		13.53	□□□□□ -0.24
LMNA-225	ENST00000515824	SLC51B	Q86UW2	128 aa		13.53	□□□□□ -0.24
LMNA-225	ENST00000515824	FMC1	Q96HJ9	113 aa		13.53	□□□□□ -0.24
LMNA-225	ENST00000515824	FABP5P3	A8MUU1	101 aa		13.52	□□□□□ -0.25
LMNA-225	ENST00000515824		M0R2P5	195 aa		13.52	□□□□□ -0.25
LMNA-225	ENST00000515824		Q86TA4	180 aa		13.52	□□□□□ -0.25
LMNA-225	ENST00000515824	ZFP30	Q9Y2G7	519 aa		13.52	□□□□□ -0.25
LMNA-225	ENST00000515824	TEX46	H3BTG2	121 aa		13.51	□□□□□ -0.25
LMNA-225	ENST00000515824	AKR1C3	P42330	323 aa		13.51	□□□□□ -0.25
LMNA-225	ENST00000515824	VSIG2	Q96IQ7	327 aa		13.51	□□□□□ -0.25
LMNA-225	ENST00000515824	C11orf21	Q9P2W6	132 aa		13.51	□□□□□ -0.25
LMNA-225	ENST00000515824		M0R2N4	97 aa		13.5	□□□□□ -0.25
LMNA-225	ENST00000515824	SULT1A2	P50226	295 aa		13.5	□□□□□ -0.25
LMNA-225	ENST00000515824	PRO0255	Q9UI72	69 aa		13.5	□□□□□ -0.25
LMNA-225	ENST00000515824	HHLA3	Q9XRX5	114 aa		13.5	□□□□□ -0.25
LMNA-225	ENST00000515824	EPPK1	P58107	5090 aa	Known RBP	13.5	□□□□□ -0.25
LMNA-225	ENST00000515824	IGLV2-18	A0A075B6J9	118 aa		13.49	□□□□□ -0.25
LMNA-225	ENST00000515824	TRAV1-1	A0A0B4J248	108 aa		13.49	□□□□□ -0.25
LMNA-225	ENST00000515824	TRGV4	A0A0C4DH28	118 aa		13.49	□□□□□ -0.25
LMNA-225	ENST00000515824	TRBV6-1	A0A0K0K1D8	114 aa		13.49	□□□□□ -0.25
LMNA-225	ENST00000515824	PAX4	O43316	350 aa		13.49	□□□□□ -0.25
LMNA-225	ENST00000515824	S100A9	P06702	114 aa	Known RBP	13.49	□□□□□ -0.25
LMNA-225	ENST00000515824	FHL2	Q14192	279 aa		13.49	□□□□□ -0.25
LMNA-225	ENST00000515824	MUC4	Q99102	2169 aa		13.49	□□□□□ -0.25
LMNA-225	ENST00000515824	DNAH2	Q9P225	4427 aa		13.49	□□□□□ -0.25
LMNA-225	ENST00000515824	COX8C	Q7Z4L0	72 aa		13.48	□□□□□ -0.25
LMNA-225	ENST00000515824	OR4C5	Q8NGB2	326 aa		13.48	□□□□□ -0.25
LMNA-225	ENST00000515824	ZNF479	Q96JC4	524 aa		13.48	□□□□□ -0.25
LMNA-225	ENST00000515824	MANBAL	Q9NQG1	85 aa		13.48	□□□□□ -0.25
LMNA-225	ENST00000515824	LINC00588	Q9Y4M8	146 aa		13.48	□□□□□ -0.25
LMNA-225	ENST00000515824	TRAV4	A0A0B4J268	109 aa		13.47	□□□□□ -0.25
LMNA-225	ENST00000515824	SFTA3	P0C7M3	94 aa		13.47	□□□□□ -0.25
LMNA-225	ENST00000515824	CRYBA4	P53673	196 aa		13.47	□□□□□ -0.25
LMNA-225	ENST00000515824	C9orf62	Q8N4C0	152 aa		13.47	□□□□□ -0.25
LMNA-225	ENST00000515824	ZC2HC1A	Q96GY0	325 aa		13.47	□□□□□ -0.25
LMNA-225	ENST00000515824	FRAS1	Q86XX4	4008 aa		13.47	□□□□□ -0.25
LMNA-225	ENST00000515824		A0A096LPF7	62 aa		13.46	□□□□□ -0.25
LMNA-225	ENST00000515824	IGKV3D-20	A0A0C4DH25	116 aa		13.46	□□□□□ -0.25
LMNA-225	ENST00000515824		C9JCJ5	164 aa		13.46	□□□□□ -0.25
LMNA-225	ENST00000515824	LTA	P01374	205 aa		13.46	□□□□□ -0.25
LMNA-225	ENST00000515824	ORM1	P02763	201 aa		13.46	□□□□□ -0.25
LMNA-225	ENST00000515824	S100A4	P26447	101 aa	Known RBP	13.46	□□□□□ -0.25
LMNA-225	ENST00000515824	CCL20	P78556	96 aa		13.46	□□□□□ -0.25
LMNA-225	ENST00000515824	C9orf85	Q96MD7	179 aa		13.46	□□□□□ -0.25
LMNA-225	ENST00000515824	GNG13	Q9P2W3	67 aa		13.46	□□□□□ -0.25
LMNA-225	ENST00000515824	SCO2	A0A1W2PP80	73 aa		13.45	□□□□□ -0.26
LMNA-225	ENST00000515824	CRIP1	P50238	77 aa		13.45	□□□□□ -0.26
LMNA-225	ENST00000515824	ESRG	Q1W209	222 aa		13.45	□□□□□ -0.26
LMNA-225	ENST00000515824	ZNF876P	Q49A33	203 aa		13.45	□□□□□ -0.26
LMNA-225	ENST00000515824	FAM162B	Q5T6X4	162 aa		13.45	□□□□□ -0.26
LMNA-225	ENST00000515824	ZNRF2	Q8NHG8	242 aa		13.45	□□□□□ -0.26
LMNA-225	ENST00000515824	ICOS	Q9Y6W8	199 aa		13.45	□□□□□ -0.26
LMNA-225	ENST00000515824		B4DEV8	164 aa		13.44	□□□□□ -0.26
LMNA-225	ENST00000515824	ASIP	P42127	132 aa		13.44	□□□□□ -0.26
LMNA-225	ENST00000515824	SH2D1A	O60880	128 aa		13.43	□□□□□ -0.26
LMNA-225	ENST00000515824	RNASE3	P12724	160 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-225	ENST00000515824	MRPL23	Q16540	153 aa	Known RBP	13.43	□□□□□ -0.26
LMNA-225	ENST00000515824	ZNF674	Q2M3X9	581 aa		13.43	□□□□□ -0.26
LMNA-225	ENST00000515824		Q6ZR54	194 aa		13.43	□□□□□ -0.26
LMNA-225	ENST00000515824	PTH2	Q96A98	100 aa		13.43	□□□□□ -0.26
LMNA-225	ENST00000515824	TXNDC17	Q9BRA2	123 aa		13.43	□□□□□ -0.26
LMNA-225	ENST00000515824		A0A1B0GVG6	124 aa		13.42	□□□□□ -0.26
LMNA-225	ENST00000515824	CIDEA	O60543	219 aa		13.42	□□□□□ -0.26
LMNA-225	ENST00000515824	BAGE2	Q86Y30	109 aa		13.42	□□□□□ -0.26
LMNA-225	ENST00000515824		Q9H8V8	135 aa		13.42	□□□□□ -0.26
LMNA-225	ENST00000515824	NACA	E9PAV3	2078 aa		13.42	□□□□□ -0.26
LMNA-225	ENST00000515824	PGPEP1L	A6NFU8	196 aa		13.41	□□□□□ -0.26
LMNA-225	ENST00000515824	KRBOX1	C9JBD0	128 aa		13.41	□□□□□ -0.26
LMNA-225	ENST00000515824		M0R036	132 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms