RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 EMP1P54849 157 aa9.86□□□□□ -0.83
PHF3-212ENST00000515594 Q8N8P6 123 aa9.86□□□□□ -0.83
PHF3-212ENST00000515594 H3BMG7 143 aa9.86□□□□□ -0.83
PHF3-212ENST00000515594 WFDC2Q14508 124 aa9.86□□□□□ -0.83
PHF3-212ENST00000515594 CCDC144NLQ6NUI1 221 aa9.86□□□□□ -0.83
PHF3-212ENST00000515594 UNQ9165/PRO28630Q6UXU0 137 aa9.86□□□□□ -0.83
PHF3-212ENST00000515594 PHLDA1Q8WV24 401 aaPredicted RBP9.86□□□□□ -0.83
PHF3-212ENST00000515594 HIF1ANQ9NWT6 349 aa9.86□□□□□ -0.83
PHF3-212ENST00000515594 SIVA1O15304 175 aa9.86□□□□□ -0.83
PHF3-212ENST00000515594 SH2D6Q7Z4S9 175 aa9.86□□□□□ -0.83
PHF3-212ENST00000515594 SRD5A1P18405 259 aa9.85□□□□□ -0.83
PHF3-212ENST00000515594 C14orf178Q8N769 122 aaPredicted RBP9.85□□□□□ -0.83
PHF3-212ENST00000515594 IGHV3-11P01762 117 aa9.85□□□□□ -0.83
PHF3-212ENST00000515594 C11orf71Q6IPW1 123 aa9.85□□□□□ -0.83
PHF3-212ENST00000515594 POLQO75417 2590 aa9.85□□□□□ -0.83
PHF3-212ENST00000515594 K7ENP7 123 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 LAGE3Q14657 143 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 BRD3OSQ6XYD6 125 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 CEND1Q8N111 149 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 FAM110DQ8TAY7 271 aaPredicted RBP9.84□□□□□ -0.83
PHF3-212ENST00000515594 C16orf92Q96LL3 132 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 SIRPDQ9H106 197 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 USP9YO00507 2555 aaPredicted RBP9.84□□□□□ -0.83
PHF3-212ENST00000515594 EDN2P20800 178 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 RPL11P62913 178 aaKnown RBP9.84□□□□□ -0.83
PHF3-212ENST00000515594 MYOZ3Q8TDC0 251 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 MGPP08493 103 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 ARL6IP6Q8N6S5 226 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 GTSF1LQ9H1H1 148 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 UBTD1Q9HAC8 227 aa9.84□□□□□ -0.83
PHF3-212ENST00000515594 TMEM238C9JI98 176 aa9.83□□□□□ -0.84
PHF3-212ENST00000515594 BPESC1Q9GZL8 116 aa9.83□□□□□ -0.84
PHF3-212ENST00000515594 CYSLTR1Q9Y271 337 aa9.83□□□□□ -0.84
PHF3-212ENST00000515594 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.83□□□□□ -0.84
PHF3-212ENST00000515594 INSL3P51460 131 aa9.83□□□□□ -0.84
PHF3-212ENST00000515594 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
PHF3-212ENST00000515594 GNRH2O43555 120 aa9.82□□□□□ -0.84
PHF3-212ENST00000515594 EBI3Q14213 229 aa9.82□□□□□ -0.84
PHF3-212ENST00000515594 ETDBQ3ZM63 59 aa9.82□□□□□ -0.84
PHF3-212ENST00000515594 METTL26Q96S19 204 aa9.82□□□□□ -0.84
PHF3-212ENST00000515594 CFAP46Q8IYW2 2715 aa9.82□□□□□ -0.84
PHF3-212ENST00000515594 JPT2Q9H910 190 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 LINC01546A6NGU7 62 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 IGLL5B9A064 214 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 ZNF479Q96JC4 524 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 A0A087WX48 190 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 LY6EQ16553 131 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 C12orf74Q32Q52 190 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 GPHB5Q86YW7 130 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 OR5A1Q8NGJ0 315 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 RASL10AQ92737 203 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 SLC50A1Q9BRV3 221 aa9.81□□□□□ -0.84
PHF3-212ENST00000515594 SCGB2A1O75556 95 aa9.8□□□□□ -0.84
PHF3-212ENST00000515594 ATP5LO75964 103 aa9.8□□□□□ -0.84
PHF3-212ENST00000515594 S100A4P26447 101 aaKnown RBP9.8□□□□□ -0.84
PHF3-212ENST00000515594 KLHL30-AS1Q8NEE0 82 aa9.8□□□□□ -0.84
PHF3-212ENST00000515594 RAXQ9Y2V3 346 aa9.8□□□□□ -0.84
PHF3-212ENST00000515594 PRSS29PA6NIE9 313 aa9.8□□□□□ -0.84
PHF3-212ENST00000515594 SCGB3A1Q96QR1 104 aa9.8□□□□□ -0.84
PHF3-212ENST00000515594 SMIM2Q9BVW6 85 aa9.8□□□□□ -0.84
PHF3-212ENST00000515594 CENPVL3A0A0U1RRI6 287 aa9.79□□□□□ -0.84
PHF3-212ENST00000515594 RNASE4P34096 147 aaKnown RBP9.79□□□□□ -0.84
PHF3-212ENST00000515594 SMAGPQ0VAQ4 97 aa9.79□□□□□ -0.84
PHF3-212ENST00000515594 ANXA2RQ3ZCQ2 193 aa9.79□□□□□ -0.84
PHF3-212ENST00000515594 HIGD1BQ9P298 99 aa9.79□□□□□ -0.84
PHF3-212ENST00000515594 MINOS1Q5TGZ0 78 aa9.79□□□□□ -0.84
PHF3-212ENST00000515594 Q6ZS46 218 aa9.79□□□□□ -0.84
PHF3-212ENST00000515594 EEF1AKMT3Q96AZ1 226 aa9.79□□□□□ -0.84
PHF3-212ENST00000515594 TM2D2Q9BX73 214 aa9.79□□□□□ -0.84
PHF3-212ENST00000515594 TSSC4Q9Y5U2 329 aaPredicted RBP9.79□□□□□ -0.84
PHF3-212ENST00000515594 MINOS1-NBL1R4GNA1 71 aa9.79□□□□□ -0.84
PHF3-212ENST00000515594 SRSF1Q07955 248 aaKnown RBP eCLIP9.79□□□□□ -0.84
PHF3-212ENST00000515594 PLEKHB2Q96CS7 222 aa9.79□□□□□ -0.84
PHF3-212ENST00000515594 NOTCH3Q9UM47 2321 aa9.78□□□□□ -0.84
PHF3-212ENST00000515594 MXRA5Q9NR99 2828 aa9.78□□□□□ -0.84
PHF3-212ENST00000515594 SRSF2Q01130 221 aaKnown RBP9.78□□□□□ -0.84
PHF3-212ENST00000515594 ZFAND2AQ8N6M9 145 aa9.78□□□□□ -0.84
PHF3-212ENST00000515594 SPOCK3Q9BQ16 436 aa9.78□□□□□ -0.84
PHF3-212ENST00000515594 RBAKDNA6NC62 111 aa9.78□□□□□ -0.84
PHF3-212ENST00000515594 TGFAP01135 160 aa9.78□□□□□ -0.84
PHF3-212ENST00000515594 ARL3P36405 182 aa9.78□□□□□ -0.84
PHF3-212ENST00000515594 FBXL19-AS1Q494R0 122 aa9.78□□□□□ -0.84
PHF3-212ENST00000515594 C9orf47Q6ZRZ4 202 aa9.78□□□□□ -0.84
PHF3-212ENST00000515594 C5orf56Q8N8D9 126 aa9.78□□□□□ -0.84
PHF3-212ENST00000515594 CHTOPQ9Y3Y2 248 aaKnown RBP9.78□□□□□ -0.84
PHF3-212ENST00000515594 E9PLD3 99 aa9.77□□□□□ -0.84
PHF3-212ENST00000515594 UBE2E1P51965 193 aa9.77□□□□□ -0.84
PHF3-212ENST00000515594 SUMO2P61956 95 aaKnown RBP9.77□□□□□ -0.84
PHF3-212ENST00000515594 ATP5G2Q06055 141 aa9.77□□□□□ -0.84
PHF3-212ENST00000515594 CD300EQ496F6 205 aaPredicted RBP9.77□□□□□ -0.84
PHF3-212ENST00000515594 PIFOQ8TCI5 191 aa9.77□□□□□ -0.84
PHF3-212ENST00000515594 RNF223E7ERA6 249 aa9.77□□□□□ -0.85
PHF3-212ENST00000515594 DUSP14O95147 198 aaKnown RBP9.77□□□□□ -0.85
PHF3-212ENST00000515594 PHLDA3Q9Y5J5 127 aa9.77□□□□□ -0.85
PHF3-212ENST00000515594 F8VRH5 84 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 HLA-DRB4P13762 266 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 C2orf66Q6UXQ4 117 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 HLA-DRB4X5D2U9 266 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 A0A087WWL8 130 aa9.76□□□□□ -0.85
PHF3-212ENST00000515594 OR11H12B2RN74 326 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms