RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 LRP5O75197 1615 aa0.13□□□□□ -2.39
NEDD4-211ENST00000514893 F2Z2F3 143 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 IFNA21P01568 189 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 CCKP06307 115 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 ADCYAP1P18509 176 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 SDC4P31431 198 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 RHOHQ15669 191 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 HSD17B12Q53GQ0 312 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 C10orf99Q6UWK7 81 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 OR5A2Q8NGI9 324 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 TMEM141Q96I45 108 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 CCDC115Q96NT0 180 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 DSCR8Q96T75 97 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 SELENOSQ9BQE4 189 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 TMEM14BQ9NUH8 114 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 KDM6BO15054 1643 aa0.12□□□□□ -2.39
NEDD4-211ENST00000514893 TCRBV3S1A0A5B6 114 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 ZNF670-ZNF695F2Z2N8 137 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 SPINK1P00995 79 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 APOC1P02654 83 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 TCRAP04437 139 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 SLC25A5P05141 298 aaKnown RBP0.11□□□□□ -2.39
NEDD4-211ENST00000514893 MPC1LP0DKB6 136 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 CCSMST1Q4G0I0 132 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 SMIM15Q7Z3B0 74 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 PRR15LQ9BU68 103 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 SLC35B3Q9H1N7 401 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 COA4Q9NYJ1 87 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 KNTC1P50748 2209 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 FER1L6Q2WGJ9 1857 aa0.11□□□□□ -2.39
NEDD4-211ENST00000514893 POLQO75417 2590 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 TNCP24821 2201 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 ZCCHC11Q5TAX3 1644 aaKnown RBP0.1□□□□□ -2.39
NEDD4-211ENST00000514893 SYNE1Q8NF91 8797 aaKnown RBP0.1□□□□□ -2.39
NEDD4-211ENST00000514893 TRBV7-6A0A0J9YX20 115 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 TRBV10-1A0A0K0K1A3 114 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 PNMA8CA0A1B0GUJ8 204 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 J3KT08 172 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 MT-ND4LP03901 98 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 PAEPP09466 180 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 KLKP1Q107X0 134 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 ASB16-AS1Q495Z4 193 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 TMEM128Q5BJH2 165 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 SNX29P2Q8IUI4 249 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 OR8I2Q8N0Y5 310 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 OR4S1Q8NGB4 309 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 BANF2Q9H503 90 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 PROK2Q9HC23 129 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 C19orf12Q9NSK7 152 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 IGF2RP11717 2491 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 TTC28Q96AY4 2481 aa0.1□□□□□ -2.39
NEDD4-211ENST00000514893 MYH1P12882 1939 aa0.09□□□□□ -2.39
NEDD4-211ENST00000514893 JMJD1CQ15652 2540 aa0.09□□□□□ -2.39
NEDD4-211ENST00000514893 A0A1B0GW64 132 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 A6NN06 94 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 TSTD3H0UI37 97 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 UQCRQO14949 82 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 DPM2O94777 84 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 HIST1H1BP16401 226 aaKnown RBP0.09□□□□□ -2.4
NEDD4-211ENST00000514893 CMPK1P30085 196 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 RPL22P35268 128 aaKnown RBP0.09□□□□□ -2.4
NEDD4-211ENST00000514893 CYP2G1PQ6ZSU1 146 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 OR9Q1Q8NGQ5 310 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 FAM213BQ8TBF2 198 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 SKA2Q8WVK7 121 aaPredicted RBP0.09□□□□□ -2.4
NEDD4-211ENST00000514893 OVOS2A0A0G2JMS6 1433 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 BLMP54132 1417 aaPredicted RBP0.09□□□□□ -2.4
NEDD4-211ENST00000514893 IGSF10Q6WRI0 2623 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 DLEC1Q9Y238 1755 aa0.09□□□□□ -2.4
NEDD4-211ENST00000514893 TANC2Q9HCD6 1990 aa0.08□□□□□ -2.4
NEDD4-211ENST00000514893 CPDO75976 1380 aa0.08□□□□□ -2.4
NEDD4-211ENST00000514893 TNS1Q9HBL0 1735 aaKnown RBP0.08□□□□□ -2.4
NEDD4-211ENST00000514893 TPRP12270 2363 aaKnown RBP0.08□□□□□ -2.4
NEDD4-211ENST00000514893 BORCS7-ASMTA0A0B4J1R7 106 aa0.08□□□□□ -2.4
NEDD4-211ENST00000514893 PGRMC1O00264 195 aaKnown RBP0.08□□□□□ -2.4
NEDD4-211ENST00000514893 AKR1D1P51857 326 aa0.08□□□□□ -2.4
NEDD4-211ENST00000514893 PLGLB1Q02325 96 aa0.08□□□□□ -2.4
NEDD4-211ENST00000514893 VMO1Q7Z5L0 202 aa0.08□□□□□ -2.4
NEDD4-211ENST00000514893 NAT14Q8WUY8 206 aa0.08□□□□□ -2.4
NEDD4-211ENST00000514893 PPP1R1CQ8WVI7 109 aa0.08□□□□□ -2.4
NEDD4-211ENST00000514893 NDUFAF1Q9Y375 327 aa0.08□□□□□ -2.4
NEDD4-211ENST00000514893 PTPRZ1P23471 2315 aaPredicted RBP0.08□□□□□ -2.4
NEDD4-211ENST00000514893 NCOR2Q9Y618 2525 aa0.08□□□□□ -2.4
NEDD4-211ENST00000514893 MED23Q9ULK4 1368 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 KIDINS220Q9ULH0 1771 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 TEX49A0A1B0GTD5 131 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 SMIM24O75264 130 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 OR2H2O95918 312 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 RBP4P02753 201 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 COX4I1P13073 169 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 IFITM1P13164 125 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 TFAMQ00059 246 aaKnown RBP0.07□□□□□ -2.4
NEDD4-211ENST00000514893 COX6A2Q02221 97 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 CLLU1Q5K131 121 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 VPS25Q9BRG1 176 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 MRPL40Q9NQ50 206 aaKnown RBP0.07□□□□□ -2.4
NEDD4-211ENST00000514893 BET1LQ9NYM9 111 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 TAS2R8Q9NYW2 309 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 METTL1Q9UBP6 276 aaKnown RBP0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms