RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TRAPPC1Q9Y5R8 145 aa6.13□□□□□ -1.43
CCL28-204ENST00000514421 J3QL48 77 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 SOCS3O14543 225 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 P01737 135 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 HLA-DQA1P01909 254 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 CRIP1P50238 77 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 PSMG4Q5JS54 123 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 XP32Q5T750 250 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 Q6ZWC4 215 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 PRNTQ86SH4 94 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 STHQ8IWL8 128 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 GATD1Q8NB37 220 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 NUP35Q8NFH5 326 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 STAB2Q8WWQ8 2551 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 WWC2-AS2Q96NR7 200 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 RPH3ALQ9UNE2 315 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 LENEPQ9Y5L5 61 aa6.12□□□□□ -1.43
CCL28-204ENST00000514421 HIGD1CA8MV81 97 aa6.11□□□□□ -1.43
CCL28-204ENST00000514421 SMIM6P0DI80 62 aa6.11□□□□□ -1.43
CCL28-204ENST00000514421 ESDP10768 282 aa6.11□□□□□ -1.43
CCL28-204ENST00000514421 NDUFA6P56556 154 aa6.11□□□□□ -1.43
CCL28-204ENST00000514421 Q6AWC8 147 aa6.11□□□□□ -1.43
CCL28-204ENST00000514421 C9orf47Q6ZRZ4 202 aa6.11□□□□□ -1.43
CCL28-204ENST00000514421 GTSF1Q8WW33 167 aa6.11□□□□□ -1.43
CCL28-204ENST00000514421 C16orf92Q96LL3 132 aa6.11□□□□□ -1.43
CCL28-204ENST00000514421 SGK494Q96LW2 274 aa6.11□□□□□ -1.43
CCL28-204ENST00000514421 NEU1Q99519 415 aa6.11□□□□□ -1.43
CCL28-204ENST00000514421 COL7A1Q02388 2944 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 IGKV2-40A0A087WW87 121 aaPredicted RBP6.1□□□□□ -1.43
CCL28-204ENST00000514421 TRBV7-9A0A0J9YWB2 115 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 KNCNA6PVL3 124 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 SPRY2O43597 315 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 CA1P00915 261 aaPredicted RBP6.1□□□□□ -1.43
CCL28-204ENST00000514421 IGKV2D-40P01614 121 aaPredicted RBP6.1□□□□□ -1.43
CCL28-204ENST00000514421 Q0VG73 95 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 DNLZQ5SXM8 178 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 FAM162BQ5T6X4 162 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 PRR27Q6MZM9 219 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 TRPT1Q86TN4 253 aaKnown RBP6.1□□□□□ -1.43
CCL28-204ENST00000514421 ZNF575Q86XF7 245 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 RNF183Q96D59 192 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 DAZAP1Q96EP5 407 aaKnown RBP6.1□□□□□ -1.43
CCL28-204ENST00000514421 PACRGQ96M98 296 aaPredicted RBP6.1□□□□□ -1.43
CCL28-204ENST00000514421 VGLL1Q99990 258 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 OVOL2Q9BRP0 275 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 MRPL18Q9H0U6 180 aaKnown RBP6.1□□□□□ -1.43
CCL28-204ENST00000514421 TP53TG1Q9Y2A0 90 aa6.1□□□□□ -1.43
CCL28-204ENST00000514421 A0A1B0GW15 77 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 XKRY2A2RUG3 117 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 ZNF705FA8MVS1 300 aaPredicted RBP6.09□□□□□ -1.43
CCL28-204ENST00000514421 SNURFLB1AK76 121 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 H3BMM0 161 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 CT45A10P0DMU9 189 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 HLA-DMBP28068 263 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 TCL1AP56279 114 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 GDF5OSQ5U4N7 250 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 GFI1BQ5VTD9 330 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 EBLN2Q6P2I7 272 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 MORN3Q6PF18 240 aaPredicted RBP6.09□□□□□ -1.43
CCL28-204ENST00000514421 FOXI2Q6ZQN5 318 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 FAM19A4Q96LR4 140 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 RETNQ9HD89 108 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 AGRNO00468 2067 aa6.09□□□□□ -1.43
CCL28-204ENST00000514421 TENM3Q9P273 2699 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 PRAC2D3DTV9 90 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 HLA-DRB4P13762 266 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 ZNF138P52744 262 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 RPS20P60866 119 aaKnown RBP6.08□□□□□ -1.44
CCL28-204ENST00000514421 NUTF2P61970 127 aaKnown RBP6.08□□□□□ -1.44
CCL28-204ENST00000514421 HBBP68871 147 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 OR10J3Q5JRS4 329 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 IGFL4Q6B9Z1 124 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 OR2D3Q8NGH3 330 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 C20orf173Q96LM9 149 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 C8orf49Q96NF6 230 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 CLUHP3Q96NS8 147 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 HIST1H2BLQ99880 126 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 NDFIP1Q9BT67 221 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 CNFNQ9BYD5 112 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 AGPAT4-IT1Q9H0P7 198 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 TP53TG3Q9ULZ0 132 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 HLA-DRB4X5D2U9 266 aa6.08□□□□□ -1.44
CCL28-204ENST00000514421 SH2D1AO60880 128 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 DUSP14O95147 198 aaKnown RBP6.07□□□□□ -1.44
CCL28-204ENST00000514421 APCSP02743 223 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 GIG44P09565 113 aaPredicted RBP6.07□□□□□ -1.44
CCL28-204ENST00000514421 CTRLP40313 264 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 ZNF80P51504 273 aaPredicted RBP6.07□□□□□ -1.44
CCL28-204ENST00000514421 AKR1D1P51857 326 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 LINC00310P59036 64 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 DEFB1P60022 68 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 DEFB135Q30KP9 77 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 LINC01559Q495D7 138 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 MRPL54Q6P161 138 aaKnown RBP6.07□□□□□ -1.44
CCL28-204ENST00000514421 ZNF493Q6ZR52 646 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 RNF182Q8N6D2 247 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 LINC00477Q96M19 166 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 EDA2RQ9HAV5 297 aa6.07□□□□□ -1.44
CCL28-204ENST00000514421 A0A0J9YX75 114 aa6.06□□□□□ -1.44
CCL28-204ENST00000514421 A0A1B0GUT8 65 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms