RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 S100A4P26447 101 aaKnown RBP11.83□□□□□ -0.52
NUP54-214ENST00000514307 HBBP68871 147 aa11.83□□□□□ -0.52
NUP54-214ENST00000514307 SPINK13Q1W4C9 94 aa11.83□□□□□ -0.52
NUP54-214ENST00000514307 LYZL1Q6UWQ5 148 aa11.83□□□□□ -0.52
NUP54-214ENST00000514307 TPPP3Q9BW30 176 aa11.83□□□□□ -0.52
NUP54-214ENST00000514307 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
NUP54-214ENST00000514307 HLA-DQA1P01909 254 aa11.82□□□□□ -0.52
NUP54-214ENST00000514307 IGLC6P0CF74 106 aa11.82□□□□□ -0.52
NUP54-214ENST00000514307 ASIPP42127 132 aa11.82□□□□□ -0.52
NUP54-214ENST00000514307 DNLZQ5SXM8 178 aa11.82□□□□□ -0.52
NUP54-214ENST00000514307 PRR9Q5T870 116 aa11.82□□□□□ -0.52
NUP54-214ENST00000514307 FRZBQ92765 325 aa11.82□□□□□ -0.52
NUP54-214ENST00000514307 C11orf21Q9P2W6 132 aa11.82□□□□□ -0.52
NUP54-214ENST00000514307 FBN1P35555 2871 aaKnown RBP11.82□□□□□ -0.52
NUP54-214ENST00000514307 DNHD1Q96M86 4753 aa11.82□□□□□ -0.52
NUP54-214ENST00000514307 M0R2Z0 102 aa11.81□□□□□ -0.52
NUP54-214ENST00000514307 CD7P09564 240 aa11.81□□□□□ -0.52
NUP54-214ENST00000514307 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
NUP54-214ENST00000514307 CAMPP49913 170 aa11.81□□□□□ -0.52
NUP54-214ENST00000514307 CACNG7P62955 275 aa11.81□□□□□ -0.52
NUP54-214ENST00000514307 FABP9Q0Z7S8 132 aa11.81□□□□□ -0.52
NUP54-214ENST00000514307 TDRG1Q3Y452 100 aa11.81□□□□□ -0.52
NUP54-214ENST00000514307 ANXA2RQ3ZCQ2 193 aa11.81□□□□□ -0.52
NUP54-214ENST00000514307 GFI1BQ5VTD9 330 aa11.81□□□□□ -0.52
NUP54-214ENST00000514307 MORN3Q6PF18 240 aaPredicted RBP11.81□□□□□ -0.52
NUP54-214ENST00000514307 TRPT1Q86TN4 253 aaKnown RBP11.81□□□□□ -0.52
NUP54-214ENST00000514307 IGHV1OR15-1A0A075B7D0 117 aa11.8□□□□□ -0.52
NUP54-214ENST00000514307 SNURFLB1AK76 121 aa11.8□□□□□ -0.52
NUP54-214ENST00000514307 WIPF1O43516 503 aa11.8□□□□□ -0.52
NUP54-214ENST00000514307 APCSP02743 223 aa11.8□□□□□ -0.52
NUP54-214ENST00000514307 OR5AL1P0C617 328 aa11.8□□□□□ -0.52
NUP54-214ENST00000514307 ZNF124Q15973 351 aa11.8□□□□□ -0.52
NUP54-214ENST00000514307 TMEM136Q6ZRR5 245 aa11.8□□□□□ -0.52
NUP54-214ENST00000514307 SMIM15Q7Z3B0 74 aa11.8□□□□□ -0.52
NUP54-214ENST00000514307 SSBP4Q9BWG4 385 aaPredicted RBP11.8□□□□□ -0.52
NUP54-214ENST00000514307 C1QTNF4Q9BXJ3 329 aa11.8□□□□□ -0.52
NUP54-214ENST00000514307 MRPL18Q9H0U6 180 aaKnown RBP11.8□□□□□ -0.52
NUP54-214ENST00000514307 COL6A5A8TX70 2615 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 TRAV12-2A0A075B6T6 113 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 S100A6P06703 90 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 IGLL1P15814 213 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 CTRLP40313 264 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 KIR3DS1Q14943 382 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 TWIST1Q15672 202 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 PRR31Q5SQ13 230 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 MUC21Q5SSG8 566 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 C19orf73Q9NVV2 129 aa11.79□□□□□ -0.52
NUP54-214ENST00000514307 TRGV11A0A075B6L2 103 aa11.78□□□□□ -0.52
NUP54-214ENST00000514307 GNRH2O43555 120 aa11.78□□□□□ -0.52
NUP54-214ENST00000514307 INSP01308 110 aa11.78□□□□□ -0.52
NUP54-214ENST00000514307 ARMS2P0C7Q2 107 aa11.78□□□□□ -0.52
NUP54-214ENST00000514307 NTF3P20783 257 aa11.78□□□□□ -0.52
NUP54-214ENST00000514307 FXYD7P58549 80 aa11.78□□□□□ -0.52
NUP54-214ENST00000514307 ZNF575Q86XF7 245 aa11.78□□□□□ -0.52
NUP54-214ENST00000514307 TMEM256Q8N2U0 113 aa11.78□□□□□ -0.52
NUP54-214ENST00000514307 SPANXN1Q5VSR9 72 aa11.77□□□□□ -0.53
NUP54-214ENST00000514307 LINC01587Q99440 93 aa11.77□□□□□ -0.53
NUP54-214ENST00000514307 LINC00467Q9BRT7 94 aa11.77□□□□□ -0.53
NUP54-214ENST00000514307 CNFNQ9BYD5 112 aa11.77□□□□□ -0.53
NUP54-214ENST00000514307 PHLDA3Q9Y5J5 127 aa11.77□□□□□ -0.53
NUP54-214ENST00000514307 IGHV4-4A0A075B6R2 117 aa11.76□□□□□ -0.53
NUP54-214ENST00000514307 RBMY1BA6NDE4 496 aaKnown RBP11.76□□□□□ -0.53
NUP54-214ENST00000514307 RBMY1EA6NEQ0 496 aaKnown RBP11.76□□□□□ -0.53
NUP54-214ENST00000514307 SNAI2O43623 268 aa11.76□□□□□ -0.53
NUP54-214ENST00000514307 RBMY1DP0C7P1 496 aaKnown RBP11.76□□□□□ -0.53
NUP54-214ENST00000514307 TRGC1P0CF51 173 aa11.76□□□□□ -0.53
NUP54-214ENST00000514307 Q6ZQT7 251 aa11.76□□□□□ -0.53
NUP54-214ENST00000514307 CBY3A6NI87 242 aa11.75□□□□□ -0.53
NUP54-214ENST00000514307 CRXO43186 299 aaPredicted RBP11.75□□□□□ -0.53
NUP54-214ENST00000514307 ZNF493Q6ZR52 646 aa11.75□□□□□ -0.53
NUP54-214ENST00000514307 ZFP82Q8N141 532 aa11.75□□□□□ -0.53
NUP54-214ENST00000514307 GATD1Q8NB37 220 aa11.75□□□□□ -0.53
NUP54-214ENST00000514307 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
NUP54-214ENST00000514307 FRMD6-AS1P0C7T7 363 aa11.74□□□□□ -0.53
NUP54-214ENST00000514307 SSTP61278 116 aa11.74□□□□□ -0.53
NUP54-214ENST00000514307 DEFB125Q8N687 156 aa11.74□□□□□ -0.53
NUP54-214ENST00000514307 SCRT2Q9NQ03 307 aa11.74□□□□□ -0.53
NUP54-214ENST00000514307 XCL2Q9UBD3 114 aa11.74□□□□□ -0.53
NUP54-214ENST00000514307 GOLT1BQ9Y3E0 138 aa11.74□□□□□ -0.53
NUP54-214ENST00000514307 TIMM8BQ9Y5J9 83 aaPredicted RBP11.74□□□□□ -0.53
NUP54-214ENST00000514307 H3BVH4 76 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 PHOX2AO14813 284 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST1H2BKO60814 126 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST1H2BJP06899 126 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 RPL35AP18077 110 aaKnown RBP11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST1H2BOP23527 126 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST1H2BBP33778 126 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST1H2BDP58876 126 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST1H2BCP62807 126 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST2H2BEQ16778 126 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.73□□□□□ -0.53
NUP54-214ENST00000514307 SYT8Q8NBV8 401 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 SPATA3Q8NHX4 192 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST1H2BHQ93079 126 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST1H2BNQ99877 126 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 HIST1H2BMQ99879 126 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 TMEM191AQ9H0A3 160 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 CSTL1Q9H114 145 aa11.73□□□□□ -0.53
NUP54-214ENST00000514307 IGHV3-16A0A0C4DH30 117 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms