RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 MPV17L2Q567V2 206 aa7.06□□□□□ -1.28
SFXN1-210ENST00000513725 RAB2BQ8WUD1 216 aa7.06□□□□□ -1.28
SFXN1-210ENST00000513725 AAMDCQ9H7C9 122 aa7.06□□□□□ -1.28
SFXN1-210ENST00000513725 A0A096LNI7 61 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 A0A0B4J2A0 478 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 A6NJY4 79 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 TMEM127O75204 238 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 MT-ND6P03923 174 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 TYMSP04818 313 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 RPS10P46783 165 aaKnown RBP7.05□□□□□ -1.28
SFXN1-210ENST00000513725 SRPXP78539 464 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 SPANXN5Q5MJ07 72 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 C10orf113Q5VZT2 155 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 EXOC3-AS1Q8N2X6 119 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 OR2T35Q8NGX2 323 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 Q9UF83 564 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 SHPKQ9UHJ6 478 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 TIMM9Q9Y5J7 89 aa7.05□□□□□ -1.28
SFXN1-210ENST00000513725 A0A087WWL8 130 aa7.04□□□□□ -1.28
SFXN1-210ENST00000513725 AGPAT2O15120 278 aa7.04□□□□□ -1.28
SFXN1-210ENST00000513725 SLC38A11Q08AI6 406 aa7.04□□□□□ -1.28
SFXN1-210ENST00000513725 SCGB2B2Q4G0G5 96 aa7.04□□□□□ -1.28
SFXN1-210ENST00000513725 LYZL2Q7Z4W2 148 aa7.04□□□□□ -1.28
SFXN1-210ENST00000513725 RTBDNQ9BSG5 229 aaPredicted RBP7.04□□□□□ -1.28
SFXN1-210ENST00000513725 MLST8Q9BVC4 326 aa7.04□□□□□ -1.28
SFXN1-210ENST00000513725 H0Y9J4 135 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 NDUFB4O95168 129 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 PKIAP61925 76 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 PDE6HQ13956 83 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 C1orf137Q5JT78 98 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 CLPSL2Q6UWE3 100 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 ZFP2Q6ZN57 461 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 OR10G7Q8NGN6 311 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 OR2G3Q8NGZ4 309 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 SUN5Q8TC36 379 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 NPVFQ9HCQ7 196 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 PRR34Q9NV39 138 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 PRR13Q9NZ81 148 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 KCNIP3Q9Y2W7 256 aa7.03□□□□□ -1.28
SFXN1-210ENST00000513725 STRAPQ9Y3F4 350 aaKnown RBP7.03□□□□□ -1.28
SFXN1-210ENST00000513725 CD3DP04234 171 aa7.02□□□□□ -1.29
SFXN1-210ENST00000513725 FAM162BQ5T6X4 162 aa7.02□□□□□ -1.29
SFXN1-210ENST00000513725 SNX29P2Q8IUI4 249 aa7.02□□□□□ -1.29
SFXN1-210ENST00000513725 SAMD12Q8N8I0 201 aa7.02□□□□□ -1.29
SFXN1-210ENST00000513725 KCNS1Q96KK3 526 aa7.02□□□□□ -1.29
SFXN1-210ENST00000513725 C9orf85Q96MD7 179 aa7.02□□□□□ -1.29
SFXN1-210ENST00000513725 FAM210AQ96ND0 272 aa7.02□□□□□ -1.29
SFXN1-210ENST00000513725 SSPOA2VEC9 5147 aa7.01□□□□□ -1.29
SFXN1-210ENST00000513725 H3BP45 60 aa7.01□□□□□ -1.29
SFXN1-210ENST00000513725 SYNGR2O43760 224 aa7.01□□□□□ -1.29
SFXN1-210ENST00000513725 TBPP20226 339 aa7.01□□□□□ -1.29
SFXN1-210ENST00000513725 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
SFXN1-210ENST00000513725 ZNF506Q5JVG8 444 aa7.01□□□□□ -1.29
SFXN1-210ENST00000513725 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
SFXN1-210ENST00000513725 ARL6IP6Q8N6S5 226 aa7.01□□□□□ -1.29
SFXN1-210ENST00000513725 C14orf178Q8N769 122 aaPredicted RBP7.01□□□□□ -1.29
SFXN1-210ENST00000513725 ASB13Q8WXK3 278 aa7.01□□□□□ -1.29
SFXN1-210ENST00000513725 PARLQ9H300 379 aa7.01□□□□□ -1.29
SFXN1-210ENST00000513725 PKIGQ9Y2B9 76 aa7.01□□□□□ -1.29
SFXN1-210ENST00000513725 SMIM31A0A1B0GVY4 71 aa7□□□□□ -1.29
SFXN1-210ENST00000513725 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
SFXN1-210ENST00000513725 RRAS2P62070 204 aaPredicted RBP7□□□□□ -1.29
SFXN1-210ENST00000513725 GPN1Q9HCN4 374 aaPredicted RBP7□□□□□ -1.29
SFXN1-210ENST00000513725 TMA7Q9Y2S6 64 aaKnown RBP7□□□□□ -1.29
SFXN1-210ENST00000513725 LENEPQ9Y5L5 61 aa7□□□□□ -1.29
SFXN1-210ENST00000513725 MACF1Q9UPN3 7388 aaKnown RBP6.99□□□□□ -1.29
SFXN1-210ENST00000513725 TRBV6-8A0A0A6YYG3 113 aa6.99□□□□□ -1.29
SFXN1-210ENST00000513725 TRAV21A0A0B4J279 112 aa6.99□□□□□ -1.29
SFXN1-210ENST00000513725 PGPEP1LA6NFU8 196 aa6.99□□□□□ -1.29
SFXN1-210ENST00000513725 A8MWV9 139 aa6.99□□□□□ -1.29
SFXN1-210ENST00000513725 GZMBP10144 247 aa6.99□□□□□ -1.29
SFXN1-210ENST00000513725 CAV2P51636 162 aa6.99□□□□□ -1.29
SFXN1-210ENST00000513725 C12orf45Q8N5I9 185 aaPredicted RBP6.99□□□□□ -1.29
SFXN1-210ENST00000513725 PTH2Q96A98 100 aa6.99□□□□□ -1.29
SFXN1-210ENST00000513725 SOSTQ9BQB4 213 aa6.99□□□□□ -1.29
SFXN1-210ENST00000513725 FCGBPQ9Y6R7 5405 aaPredicted RBP6.98□□□□□ -1.29
SFXN1-210ENST00000513725 USH2AO75445 5202 aa6.98□□□□□ -1.29
SFXN1-210ENST00000513725 PIGBOS1A0A0B4J2F0 54 aa6.98□□□□□ -1.29
SFXN1-210ENST00000513725 FNDC10F2Z333 226 aa6.98□□□□□ -1.29
SFXN1-210ENST00000513725 IGLV7-43P04211 117 aa6.98□□□□□ -1.29
SFXN1-210ENST00000513725 CFAP161Q6P656 301 aa6.98□□□□□ -1.29
SFXN1-210ENST00000513725 Q6ZRG5 221 aa6.98□□□□□ -1.29
SFXN1-210ENST00000513725 CHCHD5Q9BSY4 110 aa6.98□□□□□ -1.29
SFXN1-210ENST00000513725 GFRA4Q9GZZ7 299 aa6.98□□□□□ -1.29
SFXN1-210ENST00000513725 TMEM14CQ9P0S9 112 aa6.98□□□□□ -1.29
SFXN1-210ENST00000513725 MGAT4CQ9UBM8 478 aa6.98□□□□□ -1.29
SFXN1-210ENST00000513725 hCG_2014768A0A024R1R8 64 aa6.97□□□□□ -1.29
SFXN1-210ENST00000513725 TRAV8-4A0A0B4J246 113 aa6.97□□□□□ -1.29
SFXN1-210ENST00000513725 RBAKDNA6NC62 111 aa6.97□□□□□ -1.29
SFXN1-210ENST00000513725 P01737 135 aa6.97□□□□□ -1.29
SFXN1-210ENST00000513725 KRTAP10-6P60371 365 aaPredicted RBP6.97□□□□□ -1.29
SFXN1-210ENST00000513725 IZUMO2Q6UXV1 221 aa6.97□□□□□ -1.29
SFXN1-210ENST00000513725 CROCCP3Q8IVE0 287 aa6.97□□□□□ -1.29
SFXN1-210ENST00000513725 OR1L4Q8NGR5 311 aa6.97□□□□□ -1.29
SFXN1-210ENST00000513725 CCDC59Q9P031 241 aaKnown RBP6.97□□□□□ -1.29
SFXN1-210ENST00000513725 CARHSP1Q9Y2V2 147 aaKnown RBP6.97□□□□□ -1.29
SFXN1-210ENST00000513725 IGLV7-46A0A075B6I9 117 aa6.96□□□□□ -1.3
SFXN1-210ENST00000513725 FAM24AA6NFZ4 105 aa6.96□□□□□ -1.3
SFXN1-210ENST00000513725 CSN1S1P47710 185 aa6.96□□□□□ -1.3
SFXN1-210ENST00000513725 MT1HP80294 61 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms