RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 SMIM17P0DL12 118 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 VAMP3Q15836 100 aa7□□□□□ -1.29
CPNE4-210ENST00000512332 DAZ1Q9NQZ3 744 aaKnown RBP7□□□□□ -1.29
CPNE4-210ENST00000512332 H3BVH4 76 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 PRSS1P07477 247 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 HSD52Q0P140 79 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 ADAMTSL5Q6ZMM2 481 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 Q6ZQT7 251 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 C18orf15Q96N68 181 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 C20orf78Q9BR46 151 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 RHPN1-AS1Q9BWJ2 59 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 PEF1Q9UBV8 284 aaKnown RBP6.99□□□□□ -1.29
CPNE4-210ENST00000512332 TMEM89A2RUT3 159 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 IGHV3-11P01762 117 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 IGKCP01834 107 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 HLA-DRB4P13762 266 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 ASIPP42127 132 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 MYOZ3Q8TDC0 251 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 HIGD1BQ9P298 99 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 UFC1Q9Y3C8 167 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 HLA-DRB4X5D2U9 266 aa6.99□□□□□ -1.29
CPNE4-210ENST00000512332 A6NDN8 102 aa6.98□□□□□ -1.29
CPNE4-210ENST00000512332 M0R381 172 aa6.98□□□□□ -1.29
CPNE4-210ENST00000512332 SMIM2Q9BVW6 85 aa6.98□□□□□ -1.29
CPNE4-210ENST00000512332 DPH3P1Q9H4G8 78 aa6.98□□□□□ -1.29
CPNE4-210ENST00000512332 SPTAN1Q13813 2472 aaKnown RBP6.98□□□□□ -1.29
CPNE4-210ENST00000512332 C7orf71A4D174 169 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 CBY3A6NI87 242 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 H3BRM9 83 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 DPM2O94777 84 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 PPP1R17O96001 155 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 AVPP01185 164 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 SLC25A16P16260 332 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 Q6ZS46 218 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 WFDC3Q8IUB2 231 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 POM121L12Q8N7R1 296 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 OR4C5Q8NGB2 326 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 TRAV26-2A0A0B4J265 109 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 KLLNB2CW77 178 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 NXPH4O95158 308 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 S100A4P26447 101 aaKnown RBP6.97□□□□□ -1.29
CPNE4-210ENST00000512332 PSMB8P28062 276 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 RPL11P62913 178 aaKnown RBP6.97□□□□□ -1.29
CPNE4-210ENST00000512332 ANXA2RQ3ZCQ2 193 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 ORMDL2Q53FV1 153 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 TM4SF20Q53R12 229 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 PCP2Q8IVA1 136 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 FOXC2Q99958 501 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 PHLDA3Q9Y5J5 127 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 PKD1L2Q7Z442 2459 aa6.97□□□□□ -1.29
CPNE4-210ENST00000512332 SVEP1Q4LDE5 3571 aa6.96□□□□□ -1.29
CPNE4-210ENST00000512332 A0A087WX48 190 aa6.96□□□□□ -1.29
CPNE4-210ENST00000512332 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.29
CPNE4-210ENST00000512332 ID1P41134 155 aa6.96□□□□□ -1.29
CPNE4-210ENST00000512332 NMUP48645 174 aa6.96□□□□□ -1.29
CPNE4-210ENST00000512332 SUMO2P61956 95 aaKnown RBP6.96□□□□□ -1.29
CPNE4-210ENST00000512332 DOPEY1Q5JWR5 2465 aa6.96□□□□□ -1.3
CPNE4-210ENST00000512332 J3QLI3 93 aa6.96□□□□□ -1.3
CPNE4-210ENST00000512332 RNASE3P12724 160 aaKnown RBP6.96□□□□□ -1.3
CPNE4-210ENST00000512332 RNASE4P34096 147 aaKnown RBP6.96□□□□□ -1.3
CPNE4-210ENST00000512332 DCANP1Q8TF63 244 aa6.96□□□□□ -1.3
CPNE4-210ENST00000512332 RASL10AQ92737 203 aa6.96□□□□□ -1.3
CPNE4-210ENST00000512332 C9orf118A6NHY6 69 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-210ENST00000512332 PLNP26678 52 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 RPL32P62910 135 aaKnown RBP6.95□□□□□ -1.3
CPNE4-210ENST00000512332 AMMECR1LQ6DCA0 310 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 LINC01356Q8N9X3 169 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 TOMM6Q96B49 74 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 ODF3Q96PU9 254 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 CBY1Q9Y3M2 126 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 IGHV4OR15-8A0A075B7B6 117 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 A0A087WW49 117 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 IGKV2D-26A0A0A0MRZ7 120 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 TRAV8-6A0A0B4J262 113 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 F6UB75 175 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 ZC2HC1BQ5TFG8 222 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 AP1S3Q96PC3 154 aa6.95□□□□□ -1.3
CPNE4-210ENST00000512332 LINC01549A6NIU2 74 aa6.94□□□□□ -1.3
CPNE4-210ENST00000512332 J3KRW8 73 aa6.94□□□□□ -1.3
CPNE4-210ENST00000512332 DEFB1P60022 68 aa6.94□□□□□ -1.3
CPNE4-210ENST00000512332 LCNL1Q6ZST4 164 aa6.94□□□□□ -1.3
CPNE4-210ENST00000512332 C14orf178Q8N769 122 aaPredicted RBP6.94□□□□□ -1.3
CPNE4-210ENST00000512332 MRPL35Q9NZE8 188 aaKnown RBP6.94□□□□□ -1.3
CPNE4-210ENST00000512332 CACNA1AO00555 2505 aa6.94□□□□□ -1.3
CPNE4-210ENST00000512332 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPNE4-210ENST00000512332 A0A096LNT2 108 aa6.93□□□□□ -1.3
CPNE4-210ENST00000512332 H7C1H1 209 aa6.93□□□□□ -1.3
CPNE4-210ENST00000512332 GNRH2O43555 120 aa6.93□□□□□ -1.3
CPNE4-210ENST00000512332 KIF25-AS1Q9Y6Z4 181 aa6.93□□□□□ -1.3
CPNE4-210ENST00000512332 RNF223E7ERA6 249 aa6.93□□□□□ -1.3
CPNE4-210ENST00000512332 F8VRH5 84 aa6.93□□□□□ -1.3
CPNE4-210ENST00000512332 LINC00315P59091 139 aa6.93□□□□□ -1.3
CPNE4-210ENST00000512332 DEFB112Q30KQ8 113 aa6.93□□□□□ -1.3
CPNE4-210ENST00000512332 TMEM160Q9NX00 188 aa6.93□□□□□ -1.3
CPNE4-210ENST00000512332 SPG11Q96JI7 2443 aa6.93□□□□□ -1.3
CPNE4-210ENST00000512332 TRBV25-1A0A075B6N4 114 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 IGHV4-59P01825 116 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 TAL2Q16559 108 aa6.92□□□□□ -1.3
CPNE4-210ENST00000512332 FAM159AQ6UWV7 190 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms