RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 SLC50A1Q9BRV3 221 aa5.16□□□□□ -1.58
RFC1-213ENST00000512275 DERL1Q9BUN8 251 aa5.16□□□□□ -1.58
RFC1-213ENST00000512275 ZNF331Q9NQX6 463 aaPredicted RBP5.16□□□□□ -1.58
RFC1-213ENST00000512275 TMEM218A2RU14 115 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 IZUMO1RA6ND01 250 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 F8W036 122 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 DNASE2O00115 360 aaPredicted RBP5.15□□□□□ -1.59
RFC1-213ENST00000512275 SOCS3O14543 225 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 PDE6DO43924 150 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 ZNF253O75346 499 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 MEOX2P50222 304 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 DEFB1P60022 68 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 DEFB114Q30KQ6 69 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 SOHLH1Q5JUK2 328 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 MUC21Q5SSG8 566 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 GOLT1AQ6ZVE7 132 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 FAM24BQ8N5W8 94 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 ZNF738Q8NE65 137 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 CMTM2Q8TAZ6 248 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 SLC35B3Q9H1N7 401 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 MS4A6AQ9H2W1 248 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 SCRT2Q9NQ03 307 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 VWFP04275 2813 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 COL6A5A8TX70 2615 aa5.15□□□□□ -1.59
RFC1-213ENST00000512275 IGKV2-40A0A087WW87 121 aaPredicted RBP5.14□□□□□ -1.59
RFC1-213ENST00000512275 TRAV8-1A0A0A6YYK1 113 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 ZNF727A8MUV8 499 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 TMEM250H0YL14 139 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 IGKV2D-40P01614 121 aaPredicted RBP5.14□□□□□ -1.59
RFC1-213ENST00000512275 TCRAP04437 139 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 ZNF688P0C7X2 276 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 CSN1S1P47710 185 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 PSG3Q16557 428 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 GUCA2BQ16661 112 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 LYPD1Q8N2G4 141 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 DCANP1Q8TF63 244 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 LINC00479Q96M42 142 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 OPRPNQ99935 248 aaPredicted RBP5.14□□□□□ -1.59
RFC1-213ENST00000512275 SMIM7Q9BQ49 75 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 TXNDC17Q9BRA2 123 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 NKX6-2Q9C056 277 aaPredicted RBP5.14□□□□□ -1.59
RFC1-213ENST00000512275 SMDT1Q9H4I9 107 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 EPDR1Q9UM22 224 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 AGRNO00468 2067 aa5.14□□□□□ -1.59
RFC1-213ENST00000512275 KRBOX1C9JBD0 128 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 F6UB75 175 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 ISLRO14498 428 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 ZNF705DP0CH99 300 aaPredicted RBP5.13□□□□□ -1.59
RFC1-213ENST00000512275 ZNF705BP0CI00 300 aaPredicted RBP5.13□□□□□ -1.59
RFC1-213ENST00000512275 RPL35P42766 123 aaKnown RBP5.13□□□□□ -1.59
RFC1-213ENST00000512275 PAFAH1B2P68402 229 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 ERCC8Q13216 396 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 CENPWQ5EE01 88 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 PSMG4Q5JS54 123 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 LCN12Q6JVE5 192 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 Q86TA4 180 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 Q8NBF4 154 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 Q8TAT8 98 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 HIST1H2BAQ96A08 127 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 TCEAL7Q9BRU2 100 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 SIGLEC8Q9NYZ4 499 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 SORL1Q92673 2214 aa5.13□□□□□ -1.59
RFC1-213ENST00000512275 TRBV20OR9-2A0A075B6H5 130 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 IGLV4-3A0A075B6K6 122 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 TRAV25A0A0B4J276 109 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 OR4C46A6NHA9 309 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 EPM2AB3EWF7 344 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 K7EQM0 130 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 IGLV1-51P01701 117 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 APOC3P02656 99 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 IGLL1P15814 213 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 NDUFV3P56181 108 aaKnown RBP5.12□□□□□ -1.59
RFC1-213ENST00000512275 UBE2G1P62253 170 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 HIST1H1AQ02539 215 aaPredicted RBP5.12□□□□□ -1.59
RFC1-213ENST00000512275 LINC01620Q4KN68 170 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 LINC00242Q5T6M2 205 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 PRNTQ86SH4 94 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 VGLL1Q99990 258 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 SEC11CQ9BY50 192 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 OCR1Q9BZK8 76 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 PRELID1Q9Y255 219 aa5.12□□□□□ -1.59
RFC1-213ENST00000512275 CARHSP1Q9Y2V2 147 aaKnown RBP5.12□□□□□ -1.59
RFC1-213ENST00000512275 KNCNA6PVL3 124 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 M0R036 132 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 NDUFS6O75380 124 aaKnown RBP5.11□□□□□ -1.59
RFC1-213ENST00000512275 IGKV3-20P01619 116 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 MGST1P10620 155 aaKnown RBP5.11□□□□□ -1.59
RFC1-213ENST00000512275 S100A1P23297 94 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 GNG4P50150 75 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 DEFB131AP59861 70 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 SNRPD3P62318 126 aaKnown RBP5.11□□□□□ -1.59
RFC1-213ENST00000512275 FLI1Q01543 452 aaPredicted RBP5.11□□□□□ -1.59
RFC1-213ENST00000512275 ADIRFQ15847 76 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 TMEM183BQ1AE95 376 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 C10orf91Q5T1B1 145 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 C9orf66Q5T8R8 295 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 GDF5OSQ5U4N7 250 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 SAMD13Q5VXD3 122 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 TMEM75Q8N9X5 138 aa5.11□□□□□ -1.59
RFC1-213ENST00000512275 FMC1Q96HJ9 113 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms