RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CRIP1P50238 77 aa7.72□□□□□ -1.17
PDLIM5-217ENST00000512274 LINC01559Q495D7 138 aa7.72□□□□□ -1.17
PDLIM5-217ENST00000512274 FOXI2Q6ZQN5 318 aa7.72□□□□□ -1.17
PDLIM5-217ENST00000512274 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-217ENST00000512274 NHLRC2Q8NBF2 726 aa7.72□□□□□ -1.17
PDLIM5-217ENST00000512274 GNB1LQ9BYB4 327 aa7.72□□□□□ -1.17
PDLIM5-217ENST00000512274 A0A1B0GW15 77 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 OR4C46A6NHA9 309 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 C1orf196B1AJZ1 125 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 KLLNB2CW77 178 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 DUSP14O95147 198 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 CMC4P56277 68 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 RAB5BP61020 215 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 RPL11P62913 178 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 IGFL4Q6B9Z1 124 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 WDR73Q6P4I2 378 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 ZFAND2AQ8N6M9 145 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 GATD1Q8NB37 220 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 SGK494Q96LW2 274 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 NEU1Q99519 415 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 CNFNQ9BYD5 112 aa7.71□□□□□ -1.18
PDLIM5-217ENST00000512274 A0A0J9YX75 114 aa7.7□□□□□ -1.18
PDLIM5-217ENST00000512274 A0A1B0GXF2 115 aa7.7□□□□□ -1.18
PDLIM5-217ENST00000512274 SH2D1AO60880 128 aa7.7□□□□□ -1.18
PDLIM5-217ENST00000512274 DNLZQ5SXM8 178 aa7.7□□□□□ -1.18
PDLIM5-217ENST00000512274 PRR27Q6MZM9 219 aa7.7□□□□□ -1.18
PDLIM5-217ENST00000512274 RBPMS2Q6ZRY4 209 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-217ENST00000512274 TMEM61Q8N0U2 210 aa7.7□□□□□ -1.18
PDLIM5-217ENST00000512274 DYNLRB2Q8TF09 96 aa7.7□□□□□ -1.18
PDLIM5-217ENST00000512274 C8orf49Q96NF6 230 aa7.7□□□□□ -1.18
PDLIM5-217ENST00000512274 HIGD1CA8MV81 97 aa7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 IGLV1-51P01701 117 aa7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 HLA-DQA1P01909 254 aa7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 CTRLP40313 264 aa7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 RPS10P46783 165 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 ERCC8Q13216 396 aa7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 ACTL10Q5JWF8 245 aa7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 NUP35Q8NFH5 326 aa7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 OR2D3Q8NGH3 330 aa7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 Q8TAT8 98 aa7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 GTSF1Q8WW33 167 aa7.69□□□□□ -1.18
PDLIM5-217ENST00000512274 TRAV21A0A0B4J279 112 aa7.68□□□□□ -1.18
PDLIM5-217ENST00000512274 S100A8P05109 93 aa7.68□□□□□ -1.18
PDLIM5-217ENST00000512274 IGLC6P0CF74 106 aa7.68□□□□□ -1.18
PDLIM5-217ENST00000512274 HLA-DRB4P13762 266 aa7.68□□□□□ -1.18
PDLIM5-217ENST00000512274 TSPOP30536 169 aa7.68□□□□□ -1.18
PDLIM5-217ENST00000512274 ZNF80P51504 273 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-217ENST00000512274 CD300EQ496F6 205 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-217ENST00000512274 EBLN2Q6P2I7 272 aa7.68□□□□□ -1.18
PDLIM5-217ENST00000512274 ZNF575Q86XF7 245 aa7.68□□□□□ -1.18
PDLIM5-217ENST00000512274 HLA-DRB4X5D2U9 266 aa7.68□□□□□ -1.18
PDLIM5-217ENST00000512274 TMEM189A5PLL7 270 aa7.67□□□□□ -1.18
PDLIM5-217ENST00000512274 NUPR2A6NF83 97 aa7.67□□□□□ -1.18
PDLIM5-217ENST00000512274 F2Z2F3 143 aa7.67□□□□□ -1.18
PDLIM5-217ENST00000512274 LEPP41159 167 aa7.67□□□□□ -1.18
PDLIM5-217ENST00000512274 TDRG1Q3Y452 100 aa7.67□□□□□ -1.18
PDLIM5-217ENST00000512274 PSMG4Q5JS54 123 aa7.67□□□□□ -1.18
PDLIM5-217ENST00000512274 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-217ENST00000512274 CEMP1Q6PRD7 247 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-217ENST00000512274 AMTNQ6UX39 209 aa7.67□□□□□ -1.18
PDLIM5-217ENST00000512274 SSBP4Q9BWG4 385 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-217ENST00000512274 IGHV4-4A0A075B6R2 117 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 A0A1B0GUT8 65 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 CA1P00915 261 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 TRGC2P03986 189 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 OR5AL1P0C617 328 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 ZNF688P0C7X2 276 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 HBBP68871 147 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 DMRTA1Q5VZB9 504 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 ZNF493Q6ZR52 646 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 TMEM136Q6ZRR5 245 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 GTSCR1Q86UQ5 136 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 C20orf144Q9BQM9 153 aa7.66□□□□□ -1.18
PDLIM5-217ENST00000512274 HECTD4Q9Y4D8 3996 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 IGKV3D-20A0A0C4DH25 116 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 H3BMM0 161 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 SNAI2O43623 268 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST1H2BKO60814 126 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 AMBPP02760 352 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST1H2BJP06899 126 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST1H2BOP23527 126 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST1H2BBP33778 126 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST1H2BDP58876 126 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST1H2BCP62807 126 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST2H2BEQ16778 126 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 LGALS9CQ6DKI2 356 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST1H2BHQ93079 126 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST1H2BNQ99877 126 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 HIST1H2BMQ99879 126 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 LINC00467Q9BRT7 94 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 MAP6D1Q9H9H5 199 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 TP53TG3Q9ULZ0 132 aa7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 TMA7Q9Y2S6 64 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-217ENST00000512274 KMT2AQ03164 3969 aa7.64□□□□□ -1.19
PDLIM5-217ENST00000512274 IGKV3-7A0A075B6H7 116 aa7.64□□□□□ -1.19
PDLIM5-217ENST00000512274 F6UB75 175 aa7.64□□□□□ -1.19
PDLIM5-217ENST00000512274 GPX1P07203 203 aa7.64□□□□□ -1.19
PDLIM5-217ENST00000512274 CDKN1BP46527 198 aa7.64□□□□□ -1.19
PDLIM5-217ENST00000512274 RIGQ13278 110 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms