RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, human

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF4-217	ENST00000511892	DNAH11	Q96DT5	4516 aa		4.2	□□□□□ -1.74
RNF4-217	ENST00000511892	TRBV20OR9-2	A0A075B6H5	130 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	TRBV19	A0A075B6N1	114 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	PGP	A6NDG6	321 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	ZNF98	A6NK75	572 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	MRPS12	O15235	138 aa	Known RBP	4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	SLC25A5	P05141	298 aa	Known RBP	4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	IGLC2	P0DOY2	106 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	RPS10	P46783	165 aa	Known RBP	4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	FXYD7	P58549	80 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	PSG9	Q00887	426 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	CENPW	Q5EE01	88 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	CT83	Q5H943	113 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	LGALS9C	Q6DKI2	356 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	BAGE2	Q86Y30	109 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	OR8I2	Q8N0Y5	310 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	OCC1	Q8TAD7	63 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	IGF2BP2-AS1	Q96M15	143 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	DERL1	Q9BUN8	251 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892		Q9H3A6	140 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	IL36B	Q9NZH7	164 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	CELA1	Q9UNI1	258 aa		4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	DYNC1H1	Q14204	4646 aa	Known RBP	4.19	□□□□□ -1.74
RNF4-217	ENST00000511892	NACA	E9PAV3	2078 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892		A0A087X0K7	114 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	TRAV8-2	A0A0B4J237	113 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892		F6UB75	175 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	IGKV3-20	P01619	116 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	TCRA	P04437	139 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	CXCL1	P09341	107 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	HLA-DMB	P28068	263 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	ID1	P41134	155 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	CSN1S1	P47710	185 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	RAN	P62826	216 aa	Known RBP	4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	C12orf74	Q32Q52	190 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	IGFL4	Q6B9Z1	124 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	FOXI2	Q6ZQN5	318 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892		Q6ZTC4	211 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	TMEM75	Q8N9X5	138 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	OR4B1	Q8NGF8	309 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	MRPL53	Q96EL3	112 aa	Known RBP	4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	CLUHP3	Q96NS8	147 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	SLC50A1	Q9BRV3	221 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	AAMDC	Q9H7C9	122 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	ZNF586	Q9NXT0	402 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	ZNF492	Q9P255	531 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	APLN	Q9ULZ1	77 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	ZFP30	Q9Y2G7	519 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892	URGCP-MRPS24	S4R325	110 aa		4.18	□□□□□ -1.74
RNF4-217	ENST00000511892		A0A0J9YX75	114 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892		A0A1W2PPQ1	181 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	FAM231B	A6NCW3	169 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	C5orf52	A6NGY3	159 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892		A8MTW9	85 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	IGLL5	B9A064	214 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892		K7EN84	100 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	LTA	P01374	205 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	IGLV2-8	P01709	118 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	MT-ND6	P03923	174 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	S100A8	P05109	93 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	ZNF705D	P0CH99	300 aa	Predicted RBP	4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	ZNF705B	P0CI00	300 aa	Predicted RBP	4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	ERVFC1-1	P60608	527 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	NUTF2	P61970	127 aa	Known RBP	4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	IBA57	Q5T440	356 aa	Known RBP	4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	SAMD13	Q5VXD3	122 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	WDR73	Q6P4I2	378 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	RASL11A	Q6T310	242 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	AMTN	Q6UX39	209 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	COX8C	Q7Z4L0	72 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	C1orf158	Q8N1D5	194 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	BLNK	Q8WV28	456 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	C16orf92	Q96LL3	132 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	NEU1	Q99519	415 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	MLST8	Q9BVC4	326 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	C1QTNF4	Q9BXJ3	329 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892		V9GYV3	84 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	HERC2	O95714	4834 aa		4.17	□□□□□ -1.74
RNF4-217	ENST00000511892	IGHV4-4	A0A075B6R2	117 aa		4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	TRAV10	A0A0B4J240	114 aa		4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	RBAKDN	A6NC62	111 aa		4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	SMIM9	A6NGZ8	99 aa		4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	GATC	O43716	136 aa	Known RBP	4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	MGST1	P10620	155 aa	Known RBP	4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	TCTA	P57738	103 aa		4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	SAPCD1	Q5SSQ6	148 aa		4.16	□□□□□ -1.74
RNF4-217	ENST00000511892		Q86TA4	180 aa		4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	TMEM183A	Q8IXX5	376 aa		4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	RNF182	Q8N6D2	247 aa		4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	GFRA4	Q9GZZ7	299 aa		4.16	□□□□□ -1.74
RNF4-217	ENST00000511892	KIAA1109	Q2LD37	5005 aa		4.15	□□□□□ -1.74
RNF4-217	ENST00000511892	IGHV3OR16-12	A0A075B7B8	117 aa		4.15	□□□□□ -1.75
RNF4-217	ENST00000511892	DEFB131B	A0A096LNP1	70 aa		4.15	□□□□□ -1.75
RNF4-217	ENST00000511892	TMEM238L	A0A1B0GVL6	79 aa		4.15	□□□□□ -1.75
RNF4-217	ENST00000511892	SMIM27	A0A1W2PRY6	76 aa		4.15	□□□□□ -1.75
RNF4-217	ENST00000511892	C19orf71	A6NCJ1	209 aa		4.15	□□□□□ -1.75

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