RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SLC25A34Q6PIV7 304 aa1.86□□□□□ -2.11
TOPBP1-208ENST00000511439 SLC25A26Q70HW3 274 aa1.86□□□□□ -2.11
TOPBP1-208ENST00000511439 OR51T1Q8NGJ9 327 aa1.86□□□□□ -2.11
TOPBP1-208ENST00000511439 LZICQ8WZA0 190 aa1.86□□□□□ -2.11
TOPBP1-208ENST00000511439 GALMQ96C23 342 aa1.86□□□□□ -2.11
TOPBP1-208ENST00000511439 RMI2Q96E14 147 aa1.86□□□□□ -2.11
TOPBP1-208ENST00000511439 TPT1P8Q9HAU6 139 aa1.86□□□□□ -2.11
TOPBP1-208ENST00000511439 C21orf62Q9NYP8 219 aa1.86□□□□□ -2.11
TOPBP1-208ENST00000511439 WASHC3Q9Y3C0 194 aa1.86□□□□□ -2.11
TOPBP1-208ENST00000511439 A0A1B0GV50 99 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 DHRS12A0PJE2 317 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 DISC1C4P0D8 188 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 LECT2O14960 151 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 CXorf1O96002 111 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 GTF2F2P13984 249 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 GZMHP20718 246 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 SPCS3P61009 180 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 RAB2AP61019 212 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 RAB14P61106 215 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 CDK6Q00534 326 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 FABP5Q01469 135 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 EMX2Q04743 252 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 WFDC2Q14508 124 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 RSU1Q15404 277 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 LUZP6Q538Z0 58 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 FAM78BQ5VT40 261 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 SPATA31B1PQ5VZV4 182 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 ZNF833PQ6ZTB9 187 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 TMED4Q7Z7H5 227 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 OR52N1Q8NH53 320 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 AP3S1Q92572 193 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 ARL11Q969Q4 196 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 FXYD5Q96DB9 178 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 BTF3L4Q96K17 158 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 DERL3Q96Q80 235 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 GPX7Q96SL4 187 aaPredicted RBP1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 RHPN1-AS1Q9BWJ2 59 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 FKBP14Q9NWM8 211 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 RABAC1Q9UI14 185 aa1.85□□□□□ -2.11
TOPBP1-208ENST00000511439 A0A096LPF7 62 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 TRAV8-1A0A0A6YYK1 113 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 A8MUU9 505 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 C15orf65H3BRN8 121 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 NDUFA4O00483 81 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 DEGS1O15121 323 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 OR7C2O60412 319 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 IGKV1-39P01597 117 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 HLA-DQB1P01920 261 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 IGKV1D-39P04432 117 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 GYPBP06028 91 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 OR5G3P0C626 314 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 SAA2P0DJI9 122 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 CXCL2P19875 107 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 CXCL3P19876 107 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 PPIBP23284 216 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 TMEM97Q5BJF2 176 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 FAM104BQ5XKR9 115 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 TMEM42Q69YG0 159 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 FAM24BQ8N5W8 94 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 PXT1Q8NFP0 134 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 OR4D11Q8NGI4 311 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 DGCR14Q96DF8 476 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 MRPS24Q96EL2 167 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 PPP1R36Q96LQ0 422 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 NMNAT3Q96T66 252 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 PRRT1Q99946 306 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 PECRQ9BY49 303 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 SMPXQ9UHP9 88 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 IER3IP1Q9Y5U9 82 aa1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 ZNF706Q9Y5V0 76 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-208ENST00000511439 IGKV1-6A0A0C4DH72 117 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 B4DEV8 164 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 H0YJX3 145 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 J3QRK9 145 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 ORC5O43913 435 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 CDRT1O95170 752 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 DHFRP00374 187 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 SEC11BP0C7V7 166 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 PTHLHP12272 177 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 PSMB3P49720 205 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 DNAJB13P59910 316 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 CIRBPQ14011 172 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 TPRXLQ17RH7 258 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 DNLZQ5SXM8 178 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 SFXN4Q6P4A7 337 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 PRSS54Q6PEW0 395 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 FAM19A3Q7Z5A8 133 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 TTC9CQ8N5M4 171 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 ST20-AS1Q8NBB2 130 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 OR9I1Q8NGQ6 314 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 OR1L8Q8NGR8 309 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 OR1P1Q8NH06 330 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 Q8WTZ3 238 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 BORCS8Q96FH0 119 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 ACY3Q96HD9 319 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 GPR82Q96P67 336 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 KRTAP2-1Q9BYU5 128 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 GTSF1LQ9H1H1 148 aa1.83□□□□□ -2.12
TOPBP1-208ENST00000511439 SND1-IT1Q9HBX3 110 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 599.4 ms