RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 IGHV3-11P01762 117 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 RPL11P62913 178 aaKnown RBP10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 KIR3DS1Q14943 382 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 SAMD13Q5VXD3 122 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 ADAMTSL5Q6ZMM2 481 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 AP1S3Q96PC3 154 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 SPTAN1Q13813 2472 aaKnown RBP10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 IGLV1-40P01703 118 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 APRG1Q8IVJ8 170 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 FAM19A4Q96LR4 140 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 RHPN1-AS1Q9BWJ2 59 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 DPH3P1Q9H4G8 78 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 HIGD1BQ9P298 99 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 ZNF580Q9UK33 172 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 HHLA3Q9XRX5 114 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 RELNP78509 3460 aa10.8□□□□□ -0.68
AP003555.1-202ENST00000511013 TRAV26-2A0A0B4J265 109 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 K7EMI3 77 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 K7EMT4 169 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 Q6ZQT7 251 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 PCP2Q8IVA1 136 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 C20orf78Q9BR46 151 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 SMIM2Q9BVW6 85 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 KLK15Q9H2R5 256 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 PHLDA3Q9Y5J5 127 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 ITPR1Q14643 2758 aa10.79□□□□□ -0.68
AP003555.1-202ENST00000511013 IGHV4-30-2A0A087WSY4 118 aa10.78□□□□□ -0.68
AP003555.1-202ENST00000511013 B4DSR2 109 aa10.78□□□□□ -0.68
AP003555.1-202ENST00000511013 PPP1R17O96001 155 aa10.78□□□□□ -0.68
AP003555.1-202ENST00000511013 GATA3P23771 443 aa10.78□□□□□ -0.68
AP003555.1-202ENST00000511013 ID1P41134 155 aa10.78□□□□□ -0.68
AP003555.1-202ENST00000511013 DSCR9P59020 149 aa10.78□□□□□ -0.68
AP003555.1-202ENST00000511013 ORMDL2Q53FV1 153 aa10.78□□□□□ -0.68
AP003555.1-202ENST00000511013 ERASQ7Z444 233 aa10.78□□□□□ -0.68
AP003555.1-202ENST00000511013 DAZ1Q9NQZ3 744 aaKnown RBP10.78□□□□□ -0.68
AP003555.1-202ENST00000511013 C9orf118A6NHY6 69 aa10.77□□□□□ -0.68
AP003555.1-202ENST00000511013 J3KRW8 73 aa10.77□□□□□ -0.68
AP003555.1-202ENST00000511013 M0R381 172 aa10.77□□□□□ -0.68
AP003555.1-202ENST00000511013 RNASE4P34096 147 aaKnown RBP10.77□□□□□ -0.68
AP003555.1-202ENST00000511013 TCTAP57738 103 aa10.77□□□□□ -0.68
AP003555.1-202ENST00000511013 BLCAPP62952 87 aa10.77□□□□□ -0.68
AP003555.1-202ENST00000511013 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.68
AP003555.1-202ENST00000511013 A0A087WX48 190 aa10.77□□□□□ -0.69
AP003555.1-202ENST00000511013 TRAV8-6A0A0B4J262 113 aa10.77□□□□□ -0.69
AP003555.1-202ENST00000511013 TMEM8BA6NDV4 472 aa10.77□□□□□ -0.69
AP003555.1-202ENST00000511013 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.69
AP003555.1-202ENST00000511013 SLC25A16P16260 332 aa10.77□□□□□ -0.69
AP003555.1-202ENST00000511013 TRAV12-1A0A0B4J245 112 aa10.76□□□□□ -0.69
AP003555.1-202ENST00000511013 PLNP26678 52 aa10.76□□□□□ -0.69
AP003555.1-202ENST00000511013 TM4SF20Q53R12 229 aa10.76□□□□□ -0.69
AP003555.1-202ENST00000511013 GTF2H5Q6ZYL4 71 aa10.76□□□□□ -0.69
AP003555.1-202ENST00000511013 SUMO2P61956 95 aaKnown RBP10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 CFHR3Q02985 330 aa10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 RNASE8Q8TDE3 154 aaKnown RBP10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 TMEM160Q9NX00 188 aa10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 ASH1LQ9NR48 2969 aaKnown RBP10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 TMEM89A2RUT3 159 aa10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 GAGE10A6NGK3 116 aa10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 ZC2HC1BQ5TFG8 222 aa10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 RASL10AQ92737 203 aa10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 MRPL35Q9NZE8 188 aaKnown RBP10.75□□□□□ -0.69
AP003555.1-202ENST00000511013 IGKV2D-26A0A0A0MRZ7 120 aa10.74□□□□□ -0.69
AP003555.1-202ENST00000511013 H7C1H1 209 aa10.74□□□□□ -0.69
AP003555.1-202ENST00000511013 TOMM6Q96B49 74 aa10.74□□□□□ -0.69
AP003555.1-202ENST00000511013 SPOCK3Q9BQ16 436 aa10.74□□□□□ -0.69
AP003555.1-202ENST00000511013 Q6ZS46 218 aa10.73□□□□□ -0.69
AP003555.1-202ENST00000511013 C14orf178Q8N769 122 aaPredicted RBP10.73□□□□□ -0.69
AP003555.1-202ENST00000511013 SCGB3A1Q96QR1 104 aa10.73□□□□□ -0.69
AP003555.1-202ENST00000511013 IGKV3-7A0A075B6H7 116 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 F6UB75 175 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 GNRH2O43555 120 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 NXPH4O95158 308 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 MGPP08493 103 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 SMIM13P0DJ93 91 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 DEFB1P60022 68 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 POM121L12Q8N7R1 296 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 CHAC1Q9BUX1 264 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 PKD1L2Q7Z442 2459 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 LINC01549A6NIU2 74 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 KLLNB2CW77 178 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 RNASE3P12724 160 aaKnown RBP10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 LCNL1Q6ZST4 164 aa10.72□□□□□ -0.69
AP003555.1-202ENST00000511013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.71□□□□□ -0.69
AP003555.1-202ENST00000511013 TRBV25-1A0A075B6N4 114 aa10.71□□□□□ -0.69
AP003555.1-202ENST00000511013 F8VRH5 84 aa10.71□□□□□ -0.69
AP003555.1-202ENST00000511013 H3BUT2 72 aa10.71□□□□□ -0.69
AP003555.1-202ENST00000511013 CDKN1BP46527 198 aa10.71□□□□□ -0.69
AP003555.1-202ENST00000511013 RBX1P62877 108 aa10.71□□□□□ -0.69
AP003555.1-202ENST00000511013 TAL2Q16559 108 aa10.71□□□□□ -0.69
AP003555.1-202ENST00000511013 FAM159AQ6UWV7 190 aa10.71□□□□□ -0.69
AP003555.1-202ENST00000511013 CST9LQ9H4G1 147 aa10.71□□□□□ -0.69
AP003555.1-202ENST00000511013 GAGE12BA1L429 117 aa10.7□□□□□ -0.7
AP003555.1-202ENST00000511013 AVPP01185 164 aa10.7□□□□□ -0.7
AP003555.1-202ENST00000511013 GCSHP23434 173 aa10.7□□□□□ -0.7
AP003555.1-202ENST00000511013 PSMB8P28062 276 aa10.7□□□□□ -0.7
AP003555.1-202ENST00000511013 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
AP003555.1-202ENST00000511013 LINC01356Q8N9X3 169 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms